RNA–Protein interactions for RNA: ENST00000450385.5

SGCE-208, Transcript of sarcoglycan epsilon, humanhuman

TSL 3

Gene SGCE, Length 815 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SGCE-208ENST00000450385 FAM13AO94988 1023 aa17.52■□□□□ 0.4
SGCE-208ENST00000450385 CLTAP09496 248 aa17.52■□□□□ 0.4
SGCE-208ENST00000450385 PLCG1P19174 1290 aa17.52■□□□□ 0.4
SGCE-208ENST00000450385 NUBP1P53384 320 aa17.52■□□□□ 0.4
SGCE-208ENST00000450385 RESTQ13127 1097 aa17.52■□□□□ 0.4
SGCE-208ENST00000450385 CD302Q8IX05 232 aa17.52■□□□□ 0.4
SGCE-208ENST00000450385 MYCT1Q8N699 235 aa17.52■□□□□ 0.4
SGCE-208ENST00000450385 KRI1Q8N9T8 703 aaKnown RBP17.52■□□□□ 0.4
SGCE-208ENST00000450385 KREMEN2Q8NCW0 462 aa17.52■□□□□ 0.4
SGCE-208ENST00000450385 FAM122AQ96E09 287 aa17.52■□□□□ 0.4
SGCE-208ENST00000450385 SNX27Q96L92 541 aa17.52■□□□□ 0.4
SGCE-208ENST00000450385 PLIN2Q99541 437 aa17.52■□□□□ 0.4
SGCE-208ENST00000450385 REEP2Q9BRK0 252 aa17.52■□□□□ 0.4
SGCE-208ENST00000450385 PRKD2Q9BZL6 878 aa17.52■□□□□ 0.4
SGCE-208ENST00000450385 TSHZ2Q9NRE2 1034 aa17.52■□□□□ 0.4
SGCE-208ENST00000450385 IGSF9Q9P2J2 1179 aa17.52■□□□□ 0.4
SGCE-208ENST00000450385 SEL1LQ9UBV2 794 aa17.52■□□□□ 0.4
SGCE-208ENST00000450385 TBX20Q9UMR3 447 aa17.52■□□□□ 0.4
SGCE-208ENST00000450385 BACE2Q9Y5Z0 518 aa17.52■□□□□ 0.4
SGCE-208ENST00000450385 VWA8A3KMH1 1905 aa17.52■□□□□ 0.4
SGCE-208ENST00000450385 ZNF318Q5VUA4 2279 aa17.51■□□□□ 0.39
SGCE-208ENST00000450385 F8W810 466 aa17.51■□□□□ 0.39
SGCE-208ENST00000450385 SYN3O14994 580 aa17.51■□□□□ 0.39
SGCE-208ENST00000450385 XPOTO43592 962 aaKnown RBP17.51■□□□□ 0.39
SGCE-208ENST00000450385 TRAK2O60296 914 aa17.51■□□□□ 0.39
SGCE-208ENST00000450385 KRT18P05783 430 aaKnown RBP17.51■□□□□ 0.39
SGCE-208ENST00000450385 PLA2G5P39877 138 aa17.51■□□□□ 0.39
SGCE-208ENST00000450385 CLCNKBP51801 687 aa17.51■□□□□ 0.39
SGCE-208ENST00000450385 GTF2BQ00403 316 aa17.51■□□□□ 0.39
SGCE-208ENST00000450385 RAD51AP2Q09MP3 1159 aa17.51■□□□□ 0.39
SGCE-208ENST00000450385 RAB33AQ14088 237 aa17.51■□□□□ 0.39
SGCE-208ENST00000450385 SLC39A14Q15043 492 aa17.51■□□□□ 0.39
SGCE-208ENST00000450385 PSMD5Q16401 504 aa17.51■□□□□ 0.39
SGCE-208ENST00000450385 RTP2Q5QGT7 225 aa17.51■□□□□ 0.39
SGCE-208ENST00000450385 HFE2Q6ZVN8 426 aa17.51■□□□□ 0.39
SGCE-208ENST00000450385 ZBTB33Q86T24 672 aa17.51■□□□□ 0.39
SGCE-208ENST00000450385 PBXIP1Q96AQ6 731 aa17.51■□□□□ 0.39
SGCE-208ENST00000450385 CLSTN3Q9BQT9 956 aa17.51■□□□□ 0.39
SGCE-208ENST00000450385 OXCT2Q9BYC2 517 aaPredicted RBP17.51■□□□□ 0.39
SGCE-208ENST00000450385 MAFFQ9ULX9 164 aa17.51■□□□□ 0.39
SGCE-208ENST00000450385 CLIC4Q9Y696 253 aa17.51■□□□□ 0.39
SGCE-208ENST00000450385 WDFY4Q6ZS81 3184 aa17.5■□□□□ 0.39
SGCE-208ENST00000450385 TBCAO75347 108 aaKnown RBP17.5■□□□□ 0.39
SGCE-208ENST00000450385 ZMYND10O75800 440 aa17.5■□□□□ 0.39
SGCE-208ENST00000450385 ADRB2P07550 413 aa17.5■□□□□ 0.39
SGCE-208ENST00000450385 CYP3A5P20815 502 aa17.5■□□□□ 0.39
SGCE-208ENST00000450385 LIG4P49917 911 aa17.5■□□□□ 0.39
SGCE-208ENST00000450385 MCM6Q14566 821 aa17.5■□□□□ 0.39
SGCE-208ENST00000450385 KARSQ15046 597 aaKnown RBP17.5■□□□□ 0.39
SGCE-208ENST00000450385 SLC10A6Q3KNW5 377 aa17.5■□□□□ 0.39
SGCE-208ENST00000450385 RRAGBQ5VZM2 374 aa17.5■□□□□ 0.39
SGCE-208ENST00000450385 SLFN12LQ6IEE8 588 aa17.5■□□□□ 0.39
SGCE-208ENST00000450385 CCDC73Q6ZRK6 1079 aa17.5■□□□□ 0.39
SGCE-208ENST00000450385 CEP57Q86XR8 500 aa17.5■□□□□ 0.39
SGCE-208ENST00000450385 PALB2Q86YC2 1186 aa17.5■□□□□ 0.39
SGCE-208ENST00000450385 HVCN1Q96D96 273 aa17.5■□□□□ 0.39
SGCE-208ENST00000450385 BICD1Q96G01 975 aa17.5■□□□□ 0.39
SGCE-208ENST00000450385 MTRRQ9UBK8 725 aa17.5■□□□□ 0.39
SGCE-208ENST00000450385 FBXO2Q9UK22 296 aaPredicted RBP17.5■□□□□ 0.39
SGCE-208ENST00000450385 FBXW11Q9UKB1 542 aa17.5■□□□□ 0.39
SGCE-208ENST00000450385 MTMR6Q9Y217 621 aa17.5■□□□□ 0.39
SGCE-208ENST00000450385 H7C4K7 107 aa17.49■□□□□ 0.39
SGCE-208ENST00000450385 OGTO15294 1046 aa17.49■□□□□ 0.39
SGCE-208ENST00000450385 LIN9Q5TKA1 542 aa17.49■□□□□ 0.39
SGCE-208ENST00000450385 SV2BQ7L1I2 683 aa17.49■□□□□ 0.39
SGCE-208ENST00000450385 SUGP1Q8IWZ8 645 aaKnown RBP17.49■□□□□ 0.39
SGCE-208ENST00000450385 FBXL6Q8N531 539 aa17.49■□□□□ 0.39
SGCE-208ENST00000450385 CEP120Q8N960 986 aa17.49■□□□□ 0.39
SGCE-208ENST00000450385 SMG7Q92540 1137 aaKnown RBP17.49■□□□□ 0.39
SGCE-208ENST00000450385 ASIC4Q96FT7 647 aa17.49■□□□□ 0.39
SGCE-208ENST00000450385 ZBTB45Q96K62 511 aaPredicted RBP17.49■□□□□ 0.39
SGCE-208ENST00000450385 PIDD1Q9HB75 910 aa17.49■□□□□ 0.39
SGCE-208ENST00000450385 EPS15L1Q9UBC2 864 aa17.49■□□□□ 0.39
SGCE-208ENST00000450385 LIMD1Q9UGP4 676 aa17.49■□□□□ 0.39
SGCE-208ENST00000450385 NPHP3-ACAD11A0A0J9YXS1 232 aa17.48■□□□□ 0.39
SGCE-208ENST00000450385 TTC26A0AVF1 554 aa17.48■□□□□ 0.39
SGCE-208ENST00000450385 PODXLO00592 558 aa17.48■□□□□ 0.39
SGCE-208ENST00000450385 HNRNPDLO14979 420 aaKnown RBP17.48■□□□□ 0.39
SGCE-208ENST00000450385 XYLBO75191 536 aa17.48■□□□□ 0.39
SGCE-208ENST00000450385 GAP43P17677 238 aa17.48■□□□□ 0.39
SGCE-208ENST00000450385 MATR3P43243 847 aaKnown RBP eCLIP17.48■□□□□ 0.392e-7■■■■□ 22.3
SGCE-208ENST00000450385 NASPP49321 788 aaPredicted RBP17.48■□□□□ 0.39
SGCE-208ENST00000450385 OSTNP61366 133 aa17.48■□□□□ 0.39
SGCE-208ENST00000450385 GRIN1Q05586 938 aa17.48■□□□□ 0.39
SGCE-208ENST00000450385 POSTNQ15063 836 aa17.48■□□□□ 0.39
SGCE-208ENST00000450385 GLRA4Q5JXX5 417 aa17.48■□□□□ 0.39
SGCE-208ENST00000450385 ATL3Q6DD88 541 aa17.48■□□□□ 0.39
SGCE-208ENST00000450385 PRSS55Q6UWB4 352 aaPredicted RBP17.48■□□□□ 0.39
SGCE-208ENST00000450385 CD300LGQ6UXG3 332 aa17.48■□□□□ 0.39
SGCE-208ENST00000450385 APPL2Q8NEU8 664 aa17.48■□□□□ 0.39
SGCE-208ENST00000450385 HASPINQ8TF76 798 aa17.48■□□□□ 0.39
SGCE-208ENST00000450385 RABGGTAQ92696 567 aa17.48■□□□□ 0.39
SGCE-208ENST00000450385 ZNF707Q96C28 371 aaPredicted RBP17.48■□□□□ 0.39
SGCE-208ENST00000450385 EPSTI1Q96J88 318 aa17.48■□□□□ 0.39
SGCE-208ENST00000450385 B3GALT6Q96L58 329 aa17.48■□□□□ 0.39
SGCE-208ENST00000450385 ZNF396Q96N95 335 aaPredicted RBP17.48■□□□□ 0.39
SGCE-208ENST00000450385 ZMAT2Q96NC0 199 aaKnown RBP17.48■□□□□ 0.39
SGCE-208ENST00000450385 LRRC27Q9C0I9 530 aa17.48■□□□□ 0.39
SGCE-208ENST00000450385 IRF2BPLQ9H1B7 796 aa17.48■□□□□ 0.39
SGCE-208ENST00000450385 CXCL16Q9H2A7 254 aa17.48■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 33.8 ms