RNA–Protein interactions for RNA: ENST00000450251.5

USP53-202, Transcript of ubiquitin specific peptidase 53, humanhuman

APPRIS P1 TSL 5 BASIC

Gene USP53, Length 6,072 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP53-202ENST00000450251 SFR1Q86XK3 245 aa2.32□□□□□ -2.04
USP53-202ENST00000450251 CHCHD4Q8N4Q1 142 aa2.32□□□□□ -2.04
USP53-202ENST00000450251 PLEKHO2Q8TD55 490 aa2.32□□□□□ -2.04
USP53-202ENST00000450251 KAT2BQ92831 832 aa2.32□□□□□ -2.04
USP53-202ENST00000450251 CCDC127Q96BQ5 260 aa2.32□□□□□ -2.04
USP53-202ENST00000450251 VMP1Q96GC9 406 aa2.32□□□□□ -2.04
USP53-202ENST00000450251 METTL22Q9BUU2 404 aaPredicted RBP2.32□□□□□ -2.04
USP53-202ENST00000450251 TSSK1BQ9BXA7 367 aa2.32□□□□□ -2.04
USP53-202ENST00000450251 CCDC90BQ9GZT6 254 aa2.32□□□□□ -2.04
USP53-202ENST00000450251 PABPC3Q9H361 631 aaKnown RBP2.32□□□□□ -2.04
USP53-202ENST00000450251 IARS2Q9NSE4 1012 aaKnown RBP2.32□□□□□ -2.04
USP53-202ENST00000450251 PNPLA3Q9NST1 481 aa2.32□□□□□ -2.04
USP53-202ENST00000450251 PAG1Q9NWQ8 432 aa2.32□□□□□ -2.04
USP53-202ENST00000450251 PSMC3IPQ9P2W1 217 aaPredicted RBP2.32□□□□□ -2.04
USP53-202ENST00000450251 LEMD3Q9Y2U8 911 aa2.32□□□□□ -2.04
USP53-202ENST00000450251 GIT1Q9Y2X7 761 aa2.32□□□□□ -2.04
USP53-202ENST00000450251 DIP2AQ14689 1571 aa2.32□□□□□ -2.04
USP53-202ENST00000450251 USP42Q9H9J4 1324 aaKnown RBP2.32□□□□□ -2.04
USP53-202ENST00000450251 PREX2Q70Z35 1606 aa2.32□□□□□ -2.04
USP53-202ENST00000450251 LRRC7Q96NW7 1537 aa2.32□□□□□ -2.04
USP53-202ENST00000450251 TRPC5OSA6NMA1 111 aa2.32□□□□□ -2.04
USP53-202ENST00000450251 TTC34A8MYJ7 566 aa2.32□□□□□ -2.04
USP53-202ENST00000450251 H7C0S8 307 aa2.32□□□□□ -2.04
USP53-202ENST00000450251 WNT7AO00755 349 aa2.32□□□□□ -2.04
USP53-202ENST00000450251 CRCPO75575 148 aa2.32□□□□□ -2.04
USP53-202ENST00000450251 ZMYND10O75800 440 aa2.32□□□□□ -2.04
USP53-202ENST00000450251 RGS20O76081 388 aa2.32□□□□□ -2.04
USP53-202ENST00000450251 WDR47O94967 919 aa2.32□□□□□ -2.04
USP53-202ENST00000450251 FAM13AO94988 1023 aa2.32□□□□□ -2.04
USP53-202ENST00000450251 FGAP02671 866 aa2.32□□□□□ -2.04
USP53-202ENST00000450251 KRT1P04264 644 aa2.32□□□□□ -2.04
USP53-202ENST00000450251 PDGFRBP09619 1106 aa2.32□□□□□ -2.04
USP53-202ENST00000450251 MYBL1P10243 752 aa2.32□□□□□ -2.04
USP53-202ENST00000450251 RPL17P18621 184 aaKnown RBP2.32□□□□□ -2.04
USP53-202ENST00000450251 DRD4P21917 467 aa2.32□□□□□ -2.04
USP53-202ENST00000450251 CCNE1P24864 410 aa2.32□□□□□ -2.04
USP53-202ENST00000450251 ARHGDIAP52565 204 aa2.32□□□□□ -2.04
USP53-202ENST00000450251 OXCT1P55809 520 aa2.32□□□□□ -2.04
USP53-202ENST00000450251 YWHAEP62258 255 aaKnown RBP2.32□□□□□ -2.04
USP53-202ENST00000450251 SLC7A5Q01650 507 aa2.32□□□□□ -2.04
USP53-202ENST00000450251 TNFAIP2Q03169 654 aa2.32□□□□□ -2.04
USP53-202ENST00000450251 RUNX1T1Q06455 604 aa2.32□□□□□ -2.04
USP53-202ENST00000450251 PDE4BQ07343 736 aa2.32□□□□□ -2.04
USP53-202ENST00000450251 TBX2Q13207 712 aaPredicted RBP2.32□□□□□ -2.04
USP53-202ENST00000450251 MTFR1Q15390 333 aa2.32□□□□□ -2.04
USP53-202ENST00000450251 OASLQ15646 514 aaKnown RBP2.32□□□□□ -2.04
USP53-202ENST00000450251 P3H1Q32P28 736 aa2.32□□□□□ -2.04
USP53-202ENST00000450251 ZNF572Q7Z3I7 529 aaPredicted RBP2.32□□□□□ -2.04
USP53-202ENST00000450251 PRUNE1Q86TP1 453 aa2.32□□□□□ -2.04
USP53-202ENST00000450251 TTC30AQ86WT1 665 aa2.32□□□□□ -2.04
USP53-202ENST00000450251 HEATR4Q86WZ0 1026 aa2.32□□□□□ -2.04
USP53-202ENST00000450251 USP38Q8NB14 1042 aa2.32□□□□□ -2.04
USP53-202ENST00000450251 OR6Y1Q8NGX8 325 aa2.32□□□□□ -2.04
USP53-202ENST00000450251 ENKURQ8TC29 256 aa2.32□□□□□ -2.04
USP53-202ENST00000450251 ARHGEF1Q92888 912 aaKnown RBP2.32□□□□□ -2.04
USP53-202ENST00000450251 PSMB7Q99436 277 aa2.32□□□□□ -2.04
USP53-202ENST00000450251 MXD3Q9BW11 206 aa2.32□□□□□ -2.04
USP53-202ENST00000450251 FRMD8Q9BZ67 464 aaPredicted RBP2.32□□□□□ -2.04
USP53-202ENST00000450251 OR2B2Q9GZK3 357 aa2.32□□□□□ -2.04
USP53-202ENST00000450251 NDST4Q9H3R1 872 aa2.32□□□□□ -2.04
USP53-202ENST00000450251 MRPL44Q9H9J2 332 aaKnown RBP2.32□□□□□ -2.04
USP53-202ENST00000450251 CCDC177Q9NQR7 707 aaPredicted RBP2.32□□□□□ -2.04
USP53-202ENST00000450251 FAIMQ9NVQ4 179 aa2.32□□□□□ -2.04
USP53-202ENST00000450251 MRPL39Q9NYK5 338 aaKnown RBP2.32□□□□□ -2.04
USP53-202ENST00000450251 SELENONQ9NZV5 590 aa2.32□□□□□ -2.04
USP53-202ENST00000450251 CHPF2Q9P2E5 772 aa2.32□□□□□ -2.04
USP53-202ENST00000450251 MKLN1Q9UL63 735 aa2.32□□□□□ -2.04
USP53-202ENST00000450251 AGAP1Q9UPQ3 857 aa2.32□□□□□ -2.04
USP53-202ENST00000450251 EXOC7Q9UPT5 735 aa2.32□□□□□ -2.04
USP53-202ENST00000450251 AGTPBP1Q9UPW5 1226 aa2.32□□□□□ -2.04
USP53-202ENST00000450251 TMA7Q9Y2S6 64 aaKnown RBP2.32□□□□□ -2.04
USP53-202ENST00000450251 SPEF1Q9Y4P9 236 aa2.32□□□□□ -2.04
USP53-202ENST00000450251 PCDHGA4Q9Y5G9 962 aa2.32□□□□□ -2.04
USP53-202ENST00000450251 A0A0A6YYK5 440 aaPredicted RBP2.32□□□□□ -2.04
USP53-202ENST00000450251 A0A0G2JND7 137 aa2.32□□□□□ -2.04
USP53-202ENST00000450251 FAM170AA1A519 330 aa2.32□□□□□ -2.04
USP53-202ENST00000450251 POTEMA6NI47 508 aa2.32□□□□□ -2.04
USP53-202ENST00000450251 PDZK1P1A8MUH7 402 aa2.32□□□□□ -2.04
USP53-202ENST00000450251 hCG_1984214I3L0E3 225 aa2.32□□□□□ -2.04
USP53-202ENST00000450251 COPEO14579 308 aa2.32□□□□□ -2.04
USP53-202ENST00000450251 BUB1O43683 1085 aa2.32□□□□□ -2.04
USP53-202ENST00000450251 KATNA1O75449 491 aa2.32□□□□□ -2.04
USP53-202ENST00000450251 TRMUO75648 421 aaKnown RBP2.32□□□□□ -2.04
USP53-202ENST00000450251 UFL1O94874 794 aa2.32□□□□□ -2.04
USP53-202ENST00000450251 MED26O95402 600 aa2.32□□□□□ -2.04
USP53-202ENST00000450251 PDE6AP16499 860 aa2.32□□□□□ -2.04
USP53-202ENST00000450251 GRK3P35626 688 aa2.32□□□□□ -2.04
USP53-202ENST00000450251 EIF4A3P38919 411 aaKnown RBP2.32□□□□□ -2.04
USP53-202ENST00000450251 SERPINB9P50453 376 aa2.32□□□□□ -2.04
USP53-202ENST00000450251 CCT8P50990 548 aa2.32□□□□□ -2.04
USP53-202ENST00000450251 COPAP53621 1224 aa2.32□□□□□ -2.04
USP53-202ENST00000450251 NCKAP1LP55160 1127 aa2.32□□□□□ -2.04
USP53-202ENST00000450251 ARL4CP56559 192 aa2.32□□□□□ -2.04
USP53-202ENST00000450251 GNG2P59768 71 aa2.32□□□□□ -2.04
USP53-202ENST00000450251 CENPCQ03188 943 aa2.32□□□□□ -2.04
USP53-202ENST00000450251 RAD51Q06609 339 aa2.32□□□□□ -2.04
USP53-202ENST00000450251 MYBPC3Q14896 1274 aa2.32□□□□□ -2.04
USP53-202ENST00000450251 PDK3Q15120 406 aa2.32□□□□□ -2.04
USP53-202ENST00000450251 HP1BP3Q5SSJ5 553 aaPredicted RBP2.32□□□□□ -2.04
USP53-202ENST00000450251 ZNF618Q5T7W0 954 aa2.32□□□□□ -2.04
Retrieved 100 of 20,778 RNA–protein pairs in 18.3 ms