RNA–Protein interactions for RNA: ENST00000450000.5

CPSF7-208, Transcript of cleavage and polyadenylation specific factor 7, humanhuman

TSL 4

Gene CPSF7, Length 574 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF7-208ENST00000450000 MAPTP10636 758 aaKnown RBP24■■□□□ 1.43
CPSF7-208ENST00000450000 AVPR2P30518 371 aa24■■□□□ 1.43
CPSF7-208ENST00000450000 ZPBP2Q6X784 338 aa24■■□□□ 1.43
CPSF7-208ENST00000450000 ANKS3Q6ZW76 656 aa24■■□□□ 1.43
CPSF7-208ENST00000450000 GET4Q7L5D6 327 aaPredicted RBP24■■□□□ 1.43
CPSF7-208ENST00000450000 SNX27Q96L92 541 aa24■■□□□ 1.43
CPSF7-208ENST00000450000 KCNK12Q9HB15 430 aa24■■□□□ 1.43
CPSF7-208ENST00000450000 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP24■■□□□ 1.438e-9■■■■■ 27.8
CPSF7-208ENST00000450000 FBXW11Q9UKB1 542 aa24■■□□□ 1.43
CPSF7-208ENST00000450000 TECTAO75443 2155 aa23.99■■□□□ 1.43
CPSF7-208ENST00000450000 PODXLO00592 558 aa23.99■■□□□ 1.43
CPSF7-208ENST00000450000 C8AP07357 584 aa23.99■■□□□ 1.43
CPSF7-208ENST00000450000 HNRNPA1P09651 372 aaKnown RBP eCLIP23.99■■□□□ 1.43
CPSF7-208ENST00000450000 SCP2P22307 547 aa23.99■■□□□ 1.43
CPSF7-208ENST00000450000 FGFR3P22607 806 aa23.99■■□□□ 1.43
CPSF7-208ENST00000450000 PROZP22891 400 aa23.99■■□□□ 1.43
CPSF7-208ENST00000450000 RPL9P32969 192 aaKnown RBP23.99■■□□□ 1.43
CPSF7-208ENST00000450000 OR1D2P34982 312 aa23.99■■□□□ 1.43
CPSF7-208ENST00000450000 LIG4P49917 911 aa23.99■■□□□ 1.43
CPSF7-208ENST00000450000 NHLH1Q02575 133 aa23.99■■□□□ 1.43
CPSF7-208ENST00000450000 ZBTB45Q96K62 511 aaPredicted RBP23.99■■□□□ 1.43
CPSF7-208ENST00000450000 CCDC39Q9UFE4 941 aa23.99■■□□□ 1.43
CPSF7-208ENST00000450000 K7ENM7 598 aa23.98■■□□□ 1.43
CPSF7-208ENST00000450000 RFX1P22670 979 aa23.98■■□□□ 1.43
CPSF7-208ENST00000450000 TXLNAP40222 546 aa23.98■■□□□ 1.43
CPSF7-208ENST00000450000 CUL4AQ13619 759 aa23.98■■□□□ 1.43
CPSF7-208ENST00000450000 ALKAL1Q6UXT8 129 aa23.98■■□□□ 1.43
CPSF7-208ENST00000450000 HAUS6Q7Z4H7 955 aa23.98■■□□□ 1.43
CPSF7-208ENST00000450000 ZNF707Q96C28 371 aaPredicted RBP23.98■■□□□ 1.43
CPSF7-208ENST00000450000 IRF2BPLQ9H1B7 796 aa23.98■■□□□ 1.43
CPSF7-208ENST00000450000 SMOC2Q9H3U7 446 aa23.98■■□□□ 1.43
CPSF7-208ENST00000450000 PARVGQ9HBI0 331 aa23.98■■□□□ 1.43
CPSF7-208ENST00000450000 CDY1Q9Y6F8 540 aa23.98■■□□□ 1.43
CPSF7-208ENST00000450000 I3L4J1 428 aa23.97■■□□□ 1.43
CPSF7-208ENST00000450000 KCNE1P15382 129 aa23.97■■□□□ 1.43
CPSF7-208ENST00000450000 PLCG1P19174 1290 aa23.97■■□□□ 1.43
CPSF7-208ENST00000450000 FSHRP23945 695 aa23.97■■□□□ 1.43
CPSF7-208ENST00000450000 TKTP29401 623 aaKnown RBP23.97■■□□□ 1.43
CPSF7-208ENST00000450000 HOXD11P31277 338 aaPredicted RBP23.97■■□□□ 1.43
CPSF7-208ENST00000450000 ELF1P32519 619 aa23.97■■□□□ 1.43
CPSF7-208ENST00000450000 ABCD1P33897 745 aa23.97■■□□□ 1.43
CPSF7-208ENST00000450000 BRCC3P46736 316 aa23.97■■□□□ 1.43
CPSF7-208ENST00000450000 RAB33AQ14088 237 aa23.97■■□□□ 1.43
CPSF7-208ENST00000450000 KARSQ15046 597 aaKnown RBP23.97■■□□□ 1.43
CPSF7-208ENST00000450000 KYAT1Q16773 422 aa23.97■■□□□ 1.43
CPSF7-208ENST00000450000 XKR4Q5GH76 650 aa23.97■■□□□ 1.43
CPSF7-208ENST00000450000 IER5LQ5T953 404 aa23.97■■□□□ 1.43
CPSF7-208ENST00000450000 ALYREFQ86V81 257 aaKnown RBP23.97■■□□□ 1.43
CPSF7-208ENST00000450000 RAD54LQ92698 747 aa23.97■■□□□ 1.43
CPSF7-208ENST00000450000 NXPE3Q969Y0 559 aa23.97■■□□□ 1.43
CPSF7-208ENST00000450000 REEP2Q9BRK0 252 aa23.97■■□□□ 1.43
CPSF7-208ENST00000450000 CNTN3Q9P232 1028 aa23.97■■□□□ 1.43
CPSF7-208ENST00000450000 MTRRQ9UBK8 725 aa23.97■■□□□ 1.43
CPSF7-208ENST00000450000 H7C4K7 107 aa23.96■■□□□ 1.43
CPSF7-208ENST00000450000 STK25O00506 426 aa23.96■■□□□ 1.43
CPSF7-208ENST00000450000 HNRNPDLO14979 420 aaKnown RBP23.96■■□□□ 1.43
CPSF7-208ENST00000450000 PDGFBP01127 241 aaPredicted RBP23.96■■□□□ 1.43
CPSF7-208ENST00000450000 MARCKSP29966 332 aaPredicted RBP23.96■■□□□ 1.43
CPSF7-208ENST00000450000 VCPP55072 806 aaKnown RBP23.96■■□□□ 1.43
CPSF7-208ENST00000450000 NCKAP1LP55160 1127 aa23.96■■□□□ 1.43
CPSF7-208ENST00000450000 MCM6Q14566 821 aa23.96■■□□□ 1.43
CPSF7-208ENST00000450000 UVSSAQ2YD98 709 aa23.96■■□□□ 1.43
CPSF7-208ENST00000450000 SEZ6Q53EL9 994 aa23.96■■□□□ 1.43
CPSF7-208ENST00000450000 ARSHQ5FYA8 562 aa23.96■■□□□ 1.43
CPSF7-208ENST00000450000 AXDND1Q5T1B0 1012 aaPredicted RBP23.96■■□□□ 1.43
CPSF7-208ENST00000450000 GRASPQ7Z6J2 395 aaPredicted RBP23.96■■□□□ 1.43
CPSF7-208ENST00000450000 KRI1Q8N9T8 703 aaKnown RBP23.96■■□□□ 1.43
CPSF7-208ENST00000450000 FLCNQ8NFG4 579 aa23.96■■□□□ 1.43
CPSF7-208ENST00000450000 SLC7A14Q8TBB6 771 aa23.96■■□□□ 1.43
CPSF7-208ENST00000450000 EPS15L1Q9UBC2 864 aa23.96■■□□□ 1.43
CPSF7-208ENST00000450000 GTF3C5Q9Y5Q8 519 aaPredicted RBP23.96■■□□□ 1.43
CPSF7-208ENST00000450000 BACE2Q9Y5Z0 518 aa23.96■■□□□ 1.43
CPSF7-208ENST00000450000 CCL16O15467 120 aa23.95■■□□□ 1.42
CPSF7-208ENST00000450000 TRAK2O60296 914 aa23.95■■□□□ 1.42
CPSF7-208ENST00000450000 CLTAP09496 248 aa23.95■■□□□ 1.42
CPSF7-208ENST00000450000 MCM4P33991 863 aa23.95■■□□□ 1.42
CPSF7-208ENST00000450000 ARPP19P56211 112 aa23.95■■□□□ 1.42
CPSF7-208ENST00000450000 PPP2R3AQ06190 1150 aa23.95■■□□□ 1.42
CPSF7-208ENST00000450000 SOX4Q06945 474 aaPredicted RBP23.95■■□□□ 1.42
CPSF7-208ENST00000450000 MCL1Q07820 350 aa23.95■■□□□ 1.42
CPSF7-208ENST00000450000 LARP4BQ92615 738 aaKnown RBP23.95■■□□□ 1.42
CPSF7-208ENST00000450000 ZMAT2Q96NC0 199 aaKnown RBP23.95■■□□□ 1.42
CPSF7-208ENST00000450000 MYADMQ96S97 322 aa23.95■■□□□ 1.42
CPSF7-208ENST00000450000 PLEKHA5Q9HAU0 1116 aa23.95■■□□□ 1.42
CPSF7-208ENST00000450000 DUSP12Q9UNI6 340 aa23.95■■□□□ 1.42
CPSF7-208ENST00000450000 ZFP37Q9Y6Q3 630 aaPredicted RBP23.95■■□□□ 1.42
CPSF7-208ENST00000450000 SYN3O14994 580 aa23.94■■□□□ 1.42
CPSF7-208ENST00000450000 ADAM12O43184 909 aa23.94■■□□□ 1.42
CPSF7-208ENST00000450000 XPOTO43592 962 aaKnown RBP23.94■■□□□ 1.42
CPSF7-208ENST00000450000 HOXA9P31269 272 aa23.94■■□□□ 1.42
CPSF7-208ENST00000450000 NUBP1P53384 320 aa23.94■■□□□ 1.42
CPSF7-208ENST00000450000 APPL2Q8NEU8 664 aa23.94■■□□□ 1.42
CPSF7-208ENST00000450000 PRSS33Q8NF86 280 aa23.94■■□□□ 1.42
CPSF7-208ENST00000450000 C18orf25Q96B23 403 aaPredicted RBP23.94■■□□□ 1.42
CPSF7-208ENST00000450000 TBX20Q9UMR3 447 aa23.94■■□□□ 1.42
CPSF7-208ENST00000450000 ABLIM1O14639 778 aa23.93■■□□□ 1.42
CPSF7-208ENST00000450000 LAMP2P13473 410 aa23.93■■□□□ 1.42
CPSF7-208ENST00000450000 DDIT3P35638 169 aa23.93■■□□□ 1.42
CPSF7-208ENST00000450000 CEBPZQ03701 1054 aaKnown RBP23.93■■□□□ 1.42
CPSF7-208ENST00000450000 GRIN1Q05586 938 aa23.93■■□□□ 1.42
Retrieved 100 of 20,778 RNA–protein pairs in 42.6 ms