RNA–Protein interactions for RNA: ENST00000449339.1

AP000253.1-201, humanhuman

TSL 3 BASIC

Gene AP000253.1, Length 2,233 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AP000253.1-201ENST00000449339 TNFSF9P41273 254 aa17.3■□□□□ 0.36
AP000253.1-201ENST00000449339 EFNA5P52803 228 aa17.3■□□□□ 0.36
AP000253.1-201ENST00000449339 CDR2LQ86X02 465 aaPredicted RBP17.3■□□□□ 0.36
AP000253.1-201ENST00000449339 ZBTB8OSQ8IWT0 167 aa17.3■□□□□ 0.36
AP000253.1-201ENST00000449339 EMID1Q96A84 441 aaPredicted RBP17.3■□□□□ 0.36
AP000253.1-201ENST00000449339 PCDHB18PQ96TA0 734 aa17.3■□□□□ 0.36
AP000253.1-201ENST00000449339 TCHPQ9BT92 498 aa17.3■□□□□ 0.36
AP000253.1-201ENST00000449339 MRPL4Q9BYD3 311 aaKnown RBP17.3■□□□□ 0.36
AP000253.1-201ENST00000449339 MINDY3Q9H8M7 445 aa17.3■□□□□ 0.36
AP000253.1-201ENST00000449339 FLRT1Q9NZU1 646 aa17.3■□□□□ 0.36
AP000253.1-201ENST00000449339 PGRMC1O00264 195 aaKnown RBP17.29■□□□□ 0.36
AP000253.1-201ENST00000449339 CLDN3O15551 220 aa17.29■□□□□ 0.36
AP000253.1-201ENST00000449339 B4GALT5O43286 388 aa17.29■□□□□ 0.36
AP000253.1-201ENST00000449339 GZMAP12544 262 aa17.29■□□□□ 0.36
AP000253.1-201ENST00000449339 TNNC1P63316 161 aa17.29■□□□□ 0.36
AP000253.1-201ENST00000449339 GCNT1Q02742 428 aa17.29■□□□□ 0.36
AP000253.1-201ENST00000449339 DMTNQ08495 405 aa17.29■□□□□ 0.36
AP000253.1-201ENST00000449339 DUSP28Q4G0W2 176 aa17.29■□□□□ 0.36
AP000253.1-201ENST00000449339 TDRD10Q5VZ19 366 aaKnown RBP17.29■□□□□ 0.36
AP000253.1-201ENST00000449339 SCARA3Q6AZY7 606 aa17.29■□□□□ 0.36
AP000253.1-201ENST00000449339 SAPCD2Q86UD0 394 aa17.29■□□□□ 0.36
AP000253.1-201ENST00000449339 PPP1R13LQ8WUF5 828 aa17.29■□□□□ 0.36
AP000253.1-201ENST00000449339 DHX38Q92620 1227 aaKnown RBP17.29■□□□□ 0.36
AP000253.1-201ENST00000449339 ACO2Q99798 780 aaKnown RBP17.29■□□□□ 0.36
AP000253.1-201ENST00000449339 BUD13Q9BRD0 619 aaKnown RBP eCLIP17.29■□□□□ 0.36
AP000253.1-201ENST00000449339 ABHD16BQ9H3Z7 469 aa17.29■□□□□ 0.36
AP000253.1-201ENST00000449339 ZC3H11AO75152 810 aaKnown RBP eCLIP17.29■□□□□ 0.36
AP000253.1-201ENST00000449339 CSDE1O75534 798 aaKnown RBP17.29■□□□□ 0.36
AP000253.1-201ENST00000449339 GLI1P08151 1106 aa17.29■□□□□ 0.36
AP000253.1-201ENST00000449339 MMEP08473 750 aa17.29■□□□□ 0.36
AP000253.1-201ENST00000449339 PDE6CP51160 858 aa17.29■□□□□ 0.36
AP000253.1-201ENST00000449339 GPC5P78333 572 aa17.29■□□□□ 0.36
AP000253.1-201ENST00000449339 MAPK6Q16659 721 aa17.29■□□□□ 0.36
AP000253.1-201ENST00000449339 MORN1Q5T089 497 aa17.29■□□□□ 0.36
AP000253.1-201ENST00000449339 ZPBP2Q6X784 338 aa17.29■□□□□ 0.36
AP000253.1-201ENST00000449339 EXOC8Q8IYI6 725 aa17.29■□□□□ 0.36
AP000253.1-201ENST00000449339 OR6J1Q8NGC5 347 aa17.29■□□□□ 0.36
AP000253.1-201ENST00000449339 CTTNBP2NLQ9P2B4 639 aa17.29■□□□□ 0.36
AP000253.1-201ENST00000449339 HPCAL4Q9UM19 191 aa17.29■□□□□ 0.36
AP000253.1-201ENST00000449339 NOC2LQ9Y3T9 749 aaKnown RBP17.29■□□□□ 0.36
AP000253.1-201ENST00000449339 MANSC4A6NHS7 340 aaPredicted RBP17.28■□□□□ 0.36
AP000253.1-201ENST00000449339 INO80B-WBP1J3KQ70 363 aa17.28■□□□□ 0.36
AP000253.1-201ENST00000449339 HEXIM1O94992 359 aaKnown RBP17.28■□□□□ 0.36
AP000253.1-201ENST00000449339 C4BPAP04003 597 aaKnown RBP17.28■□□□□ 0.36
AP000253.1-201ENST00000449339 TNFRSF8P28908 595 aa17.28■□□□□ 0.36
AP000253.1-201ENST00000449339 HADHBP55084 474 aaKnown RBP17.28■□□□□ 0.36
AP000253.1-201ENST00000449339 FMO1Q01740 532 aa17.28■□□□□ 0.36
AP000253.1-201ENST00000449339 ZACNQ401N2 412 aa17.28■□□□□ 0.36
AP000253.1-201ENST00000449339 ZNF484Q5JVG2 852 aa17.28■□□□□ 0.36
AP000253.1-201ENST00000449339 RGMBQ6NW40 437 aa17.28■□□□□ 0.36
AP000253.1-201ENST00000449339 ENOSF1Q7L5Y1 443 aa17.28■□□□□ 0.36
AP000253.1-201ENST00000449339 IFT20Q8IY31 132 aa17.28■□□□□ 0.36
AP000253.1-201ENST00000449339 RASGEF1CQ8N431 466 aa17.28■□□□□ 0.36
AP000253.1-201ENST00000449339 CCDC102AQ96A19 550 aa17.28■□□□□ 0.36
AP000253.1-201ENST00000449339 LENG1Q96BZ8 264 aaPredicted RBP17.28■□□□□ 0.36
AP000253.1-201ENST00000449339 JPH2Q9BR39 696 aaPredicted RBP17.28■□□□□ 0.36
AP000253.1-201ENST00000449339 INO80BQ9C086 356 aaPredicted RBP17.28■□□□□ 0.36
AP000253.1-201ENST00000449339 C1orf112Q9NSG2 853 aa17.28■□□□□ 0.36
AP000253.1-201ENST00000449339 CNTNAP2Q9UHC6 1331 aa17.28■□□□□ 0.36
AP000253.1-201ENST00000449339 H3BRB1 525 aa17.28■□□□□ 0.36
AP000253.1-201ENST00000449339 FAM189A1O60320 539 aa17.28■□□□□ 0.36
AP000253.1-201ENST00000449339 TOM1L1O75674 476 aa17.28■□□□□ 0.36
AP000253.1-201ENST00000449339 VNN1O95497 513 aa17.28■□□□□ 0.36
AP000253.1-201ENST00000449339 LDHAP00338 332 aaKnown RBP17.28■□□□□ 0.36
AP000253.1-201ENST00000449339 MMP3P08254 477 aa17.28■□□□□ 0.36
AP000253.1-201ENST00000449339 IQCF3P0C7M6 154 aa17.28■□□□□ 0.36
AP000253.1-201ENST00000449339 IRX5P78411 483 aaPredicted RBP17.28■□□□□ 0.36
AP000253.1-201ENST00000449339 CDR2Q01850 454 aa17.28■□□□□ 0.36
AP000253.1-201ENST00000449339 BIRC3Q13489 604 aa17.28■□□□□ 0.36
AP000253.1-201ENST00000449339 CCL14Q16627 93 aa17.28■□□□□ 0.36
AP000253.1-201ENST00000449339 HSP90B2PQ58FF3 399 aa17.28■□□□□ 0.36
AP000253.1-201ENST00000449339 SPOPLQ6IQ16 392 aa17.28■□□□□ 0.36
AP000253.1-201ENST00000449339 KLHL7Q8IXQ5 586 aa17.28■□□□□ 0.36
AP000253.1-201ENST00000449339 OR5B17Q8NGF7 314 aa17.28■□□□□ 0.36
AP000253.1-201ENST00000449339 CALR3Q96L12 384 aaKnown RBP17.28■□□□□ 0.36
AP000253.1-201ENST00000449339 TUT1Q9H6E5 874 aaKnown RBP17.28■□□□□ 0.36
AP000253.1-201ENST00000449339 ABLIM1O14639 778 aa17.27■□□□□ 0.36
AP000253.1-201ENST00000449339 PPFIA4O75335 1185 aa17.27■□□□□ 0.36
AP000253.1-201ENST00000449339 CALCAP01258 141 aa17.27■□□□□ 0.36
AP000253.1-201ENST00000449339 HLA-DRAP01903 254 aa17.27■□□□□ 0.36
AP000253.1-201ENST00000449339 KRT5P13647 590 aa17.27■□□□□ 0.36
AP000253.1-201ENST00000449339 EPHB4P54760 987 aa17.27■□□□□ 0.36
AP000253.1-201ENST00000449339 GUCY2DQ02846 1103 aa17.27■□□□□ 0.36
AP000253.1-201ENST00000449339 MAP2K5Q13163 448 aa17.27■□□□□ 0.36
AP000253.1-201ENST00000449339 TCEAL1Q15170 157 aa17.27■□□□□ 0.36
AP000253.1-201ENST00000449339 FAM81BQ96LP2 452 aa17.27■□□□□ 0.36
AP000253.1-201ENST00000449339 AP1M1Q9BXS5 423 aa17.27■□□□□ 0.36
AP000253.1-201ENST00000449339 C2orf40Q9H1Z8 148 aa17.27■□□□□ 0.36
AP000253.1-201ENST00000449339 PLEKHA4Q9H4M7 779 aa17.27■□□□□ 0.36
AP000253.1-201ENST00000449339 EPB41L5Q9HCM4 733 aa17.27■□□□□ 0.36
AP000253.1-201ENST00000449339 GDF3Q9NR23 364 aa17.27■□□□□ 0.36
AP000253.1-201ENST00000449339 ZNF236Q9UL36 1845 aa17.27■□□□□ 0.36
AP000253.1-201ENST00000449339 KAT6AQ92794 2004 aa17.27■□□□□ 0.35
AP000253.1-201ENST00000449339 ZSCAN5CA6NGD5 496 aaPredicted RBP17.27■□□□□ 0.35
AP000253.1-201ENST00000449339 VTNP04004 478 aa17.27■□□□□ 0.35
AP000253.1-201ENST00000449339 PIK3CAP42336 1068 aa17.27■□□□□ 0.35
AP000253.1-201ENST00000449339 PTENP60484 403 aa17.27■□□□□ 0.35
AP000253.1-201ENST00000449339 MBTD1Q05BQ5 628 aa17.27■□□□□ 0.35
AP000253.1-201ENST00000449339 TFDP1Q14186 410 aa17.27■□□□□ 0.35
AP000253.1-201ENST00000449339 WDR44Q5JSH3 913 aa17.27■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 20.5 ms