RNA–Protein interactions for RNA: ENST00000449223.3

RPS28-202, Transcript of ribosomal protein S28, humanhuman

TSL 2

Gene RPS28, Length 1,523 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPS28-202ENST00000449223 ZBTB6Q15916 424 aa20.83■□□□□ 0.92
RPS28-202ENST00000449223 SLC24A5Q71RS6 500 aa20.83■□□□□ 0.92
RPS28-202ENST00000449223 ZNF598Q86UK7 904 aaKnown RBP20.83■□□□□ 0.92
RPS28-202ENST00000449223 RTN4RL1Q86UN2 441 aaPredicted RBP20.83■□□□□ 0.92
RPS28-202ENST00000449223 DBF4BQ8NFT6 615 aa20.83■□□□□ 0.92
RPS28-202ENST00000449223 TAS1R2Q8TE23 839 aa20.83■□□□□ 0.92
RPS28-202ENST00000449223 LINC01599Q8WXQ3 324 aa20.83■□□□□ 0.92
RPS28-202ENST00000449223 SEPT8Q92599 483 aa20.83■□□□□ 0.92
RPS28-202ENST00000449223 ANKRD36BP1Q96IX9 119 aa20.83■□□□□ 0.92
RPS28-202ENST00000449223 GANQ9H2C0 597 aa20.83■□□□□ 0.92
RPS28-202ENST00000449223 RNF39Q9H2S5 420 aa20.83■□□□□ 0.92
RPS28-202ENST00000449223 MMRN2Q9H8L6 949 aa20.83■□□□□ 0.92
RPS28-202ENST00000449223 C1orf112Q9NSG2 853 aa20.83■□□□□ 0.92
RPS28-202ENST00000449223 RAB20Q9NX57 234 aa20.83■□□□□ 0.92
RPS28-202ENST00000449223 CAPN11Q9UMQ6 739 aa20.83■□□□□ 0.92
RPS28-202ENST00000449223 GIT1Q9Y2X7 761 aa20.83■□□□□ 0.92
RPS28-202ENST00000449223 TIMP1P01033 207 aa20.82■□□□□ 0.92
RPS28-202ENST00000449223 NFICP08651 508 aa20.82■□□□□ 0.92
RPS28-202ENST00000449223 RFX1P22670 979 aa20.82■□□□□ 0.92
RPS28-202ENST00000449223 TMEM132DQ14C87 1099 aa20.82■□□□□ 0.92
RPS28-202ENST00000449223 KLHDC7AQ5VTJ3 777 aa20.82■□□□□ 0.92
RPS28-202ENST00000449223 LMBRD2Q68DH5 695 aaPredicted RBP20.82■□□□□ 0.92
RPS28-202ENST00000449223 JADE1Q6IE81 842 aa20.82■□□□□ 0.92
RPS28-202ENST00000449223 TRAPPC11Q7Z392 1133 aa20.82■□□□□ 0.92
RPS28-202ENST00000449223 NEK11Q8NG66 645 aa20.82■□□□□ 0.92
RPS28-202ENST00000449223 CACTINQ8WUQ7 758 aaKnown RBP20.82■□□□□ 0.92
RPS28-202ENST00000449223 FAM212AQ96EL1 285 aa20.82■□□□□ 0.92
RPS28-202ENST00000449223 LSM14BQ9BX40 385 aaKnown RBP20.82■□□□□ 0.92
RPS28-202ENST00000449223 PPP1R12CQ9BZL4 782 aa20.82■□□□□ 0.92
RPS28-202ENST00000449223 MTMR12Q9C0I1 747 aa20.82■□□□□ 0.92
RPS28-202ENST00000449223 INTS2Q9H0H0 1204 aaKnown RBP20.82■□□□□ 0.92
RPS28-202ENST00000449223 UBN1Q9NPG3 1134 aa20.82■□□□□ 0.92
RPS28-202ENST00000449223 FAM207AQ9NSI2 230 aaPredicted RBP20.82■□□□□ 0.92
RPS28-202ENST00000449223 LTBP2Q14767 1821 aa20.81■□□□□ 0.92
RPS28-202ENST00000449223 EPHB6O15197 1021 aa20.81■□□□□ 0.92
RPS28-202ENST00000449223 INPPL1O15357 1258 aa20.81■□□□□ 0.92
RPS28-202ENST00000449223 VNN1O95497 513 aa20.81■□□□□ 0.92
RPS28-202ENST00000449223 EOMESO95936 686 aa20.81■□□□□ 0.92
RPS28-202ENST00000449223 TMEM191BP0C7N4 346 aa20.81■□□□□ 0.92
RPS28-202ENST00000449223 AKAP5P24588 427 aa20.81■□□□□ 0.92
RPS28-202ENST00000449223 AGMOQ6ZNB7 445 aa20.81■□□□□ 0.92
RPS28-202ENST00000449223 PPFIBP1Q86W92 1011 aa20.81■□□□□ 0.92
RPS28-202ENST00000449223 ECHDC2Q86YB7 292 aa20.81■□□□□ 0.92
RPS28-202ENST00000449223 CNGA4Q8IV77 575 aa20.81■□□□□ 0.92
RPS28-202ENST00000449223 CXorf38Q8TB03 319 aa20.81■□□□□ 0.92
RPS28-202ENST00000449223 PGBD4Q96DM1 585 aa20.81■□□□□ 0.92
RPS28-202ENST00000449223 SCLYQ96I15 445 aa20.81■□□□□ 0.92
RPS28-202ENST00000449223 PCMTD1Q96MG8 357 aaPredicted RBP20.81■□□□□ 0.92
RPS28-202ENST00000449223 ZMAT2Q96NC0 199 aaKnown RBP20.81■□□□□ 0.92
RPS28-202ENST00000449223 CEP72Q9P209 647 aa20.81■□□□□ 0.92
RPS28-202ENST00000449223 APEX2Q9UBZ4 518 aa20.81■□□□□ 0.92
RPS28-202ENST00000449223 GTF3C5Q9Y5Q8 519 aaPredicted RBP20.81■□□□□ 0.92
RPS28-202ENST00000449223 MICAL3Q7RTP6 2002 aa20.81■□□□□ 0.92
RPS28-202ENST00000449223 TRIM43BA6NCK2 446 aa20.8■□□□□ 0.92
RPS28-202ENST00000449223 MFAP3LO75121 409 aa20.8■□□□□ 0.92
RPS28-202ENST00000449223 TNNC2P02585 160 aa20.8■□□□□ 0.92
RPS28-202ENST00000449223 TPM1P09493 284 aa20.8■□□□□ 0.92
RPS28-202ENST00000449223 ITGA4P13612 1032 aa20.8■□□□□ 0.92
RPS28-202ENST00000449223 UCHL3P15374 230 aa20.8■□□□□ 0.92
RPS28-202ENST00000449223 CASP14P31944 242 aa20.8■□□□□ 0.92
RPS28-202ENST00000449223 FXR1P51114 621 aaKnown RBP eCLIP20.8■□□□□ 0.92
RPS28-202ENST00000449223 CCL23P55773 120 aa20.8■□□□□ 0.92
RPS28-202ENST00000449223 TFAMQ00059 246 aaKnown RBP20.8■□□□□ 0.92
RPS28-202ENST00000449223 SMYD5Q6GMV2 418 aa20.8■□□□□ 0.92
RPS28-202ENST00000449223 CCDC186Q7Z3E2 898 aa20.8■□□□□ 0.92
RPS28-202ENST00000449223 CCDC150Q8NCX0 1101 aa20.8■□□□□ 0.92
RPS28-202ENST00000449223 SEMA4DQ92854 862 aa20.8■□□□□ 0.92
RPS28-202ENST00000449223 TRIM43Q96BQ3 446 aaPredicted RBP20.8■□□□□ 0.92
RPS28-202ENST00000449223 VWCEQ96DN2 955 aa20.8■□□□□ 0.92
RPS28-202ENST00000449223 NAA15Q9BXJ9 866 aaKnown RBP20.8■□□□□ 0.92
RPS28-202ENST00000449223 ELAC1Q9H777 363 aaKnown RBP20.8■□□□□ 0.92
RPS28-202ENST00000449223 TTC3P53804 2025 aa20.79■□□□□ 0.92
RPS28-202ENST00000449223 HLA-DRAP01903 254 aa20.79■□□□□ 0.92
RPS28-202ENST00000449223 CYP3A5P20815 502 aa20.79■□□□□ 0.92
RPS28-202ENST00000449223 ZBED6P86452 979 aa20.79■□□□□ 0.92
RPS28-202ENST00000449223 C1orf127Q8N9H9 656 aa20.79■□□□□ 0.92
RPS28-202ENST00000449223 TC2NQ8N9U0 490 aa20.79■□□□□ 0.92
RPS28-202ENST00000449223 GSTCDQ8NEC7 633 aa20.79■□□□□ 0.92
RPS28-202ENST00000449223 PARP2Q9UGN5 583 aa20.79■□□□□ 0.92
RPS28-202ENST00000449223 ITGA11Q9UKX5 1188 aa20.79■□□□□ 0.92
RPS28-202ENST00000449223 MYO6Q9UM54 1294 aa20.79■□□□□ 0.92
RPS28-202ENST00000449223 SMIM28A0A1B0GU29 152 aa20.78■□□□□ 0.92
RPS28-202ENST00000449223 AKR1B15C9JRZ8 316 aaPredicted RBP20.78■□□□□ 0.92
RPS28-202ENST00000449223 RBAK-RBAKDNI3L0D1 243 aa20.78■□□□□ 0.92
RPS28-202ENST00000449223 RNF225M0QZC1 329 aaPredicted RBP20.78■□□□□ 0.92
RPS28-202ENST00000449223 ACTN1P12814 892 aa20.78■□□□□ 0.92
RPS28-202ENST00000449223 BIRC3Q13489 604 aa20.78■□□□□ 0.92
RPS28-202ENST00000449223 NCOA4Q13772 614 aa20.78■□□□□ 0.92
RPS28-202ENST00000449223 MFSD5Q6N075 450 aa20.78■□□□□ 0.92
RPS28-202ENST00000449223 BAP1Q92560 729 aa20.78■□□□□ 0.92
RPS28-202ENST00000449223 KIF12Q96FN5 646 aa20.78■□□□□ 0.92
RPS28-202ENST00000449223 FAXDC2Q96IV6 333 aa20.78■□□□□ 0.92
RPS28-202ENST00000449223 FAM84AQ96KN4 292 aa20.78■□□□□ 0.92
RPS28-202ENST00000449223 PPP1R10Q96QC0 940 aaKnown RBP20.78■□□□□ 0.92
RPS28-202ENST00000449223 DNAJC7Q99615 494 aa20.78■□□□□ 0.92
RPS28-202ENST00000449223 APOL6Q9BWW8 343 aa20.78■□□□□ 0.92
RPS28-202ENST00000449223 CXCL16Q9H2A7 254 aa20.78■□□□□ 0.92
RPS28-202ENST00000449223 SIX4Q9UIU6 781 aa20.78■□□□□ 0.92
RPS28-202ENST00000449223 UBQLN1Q9UMX0 589 aaKnown RBP20.78■□□□□ 0.92
RPS28-202ENST00000449223 LUC7L2Q9Y383 392 aaKnown RBP20.78■□□□□ 0.92
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms