RNA–Protein interactions for RNA: ENST00000448940.5

CDC42BPA-209, Transcript of CDC42 binding protein kinase alpha, humanhuman

TSL 1 (best)

Gene CDC42BPA, Length 7,355 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPA-209ENST00000448940 POTEEQ6S8J3 1075 aa6.02□□□□□ -1.45
CDC42BPA-209ENST00000448940 PIAS4Q8N2W9 510 aaPredicted RBP6.02□□□□□ -1.45
CDC42BPA-209ENST00000448940 RTP3Q9BQQ7 232 aa6.02□□□□□ -1.45
CDC42BPA-209ENST00000448940 PHF20Q9BVI0 1012 aa6.02□□□□□ -1.45
CDC42BPA-209ENST00000448940 EDEM3Q9BZQ6 932 aa6.02□□□□□ -1.45
CDC42BPA-209ENST00000448940 SLC39A2Q9NP94 309 aa6.02□□□□□ -1.45
CDC42BPA-209ENST00000448940 FAM8A1Q9UBU6 413 aa6.02□□□□□ -1.45
CDC42BPA-209ENST00000448940 ADGRA2Q96PE1 1338 aa6.02□□□□□ -1.45
CDC42BPA-209ENST00000448940 STK36Q9NRP7 1315 aa6.02□□□□□ -1.45
CDC42BPA-209ENST00000448940 IGSF9BQ9UPX0 1349 aa6.02□□□□□ -1.45
CDC42BPA-209ENST00000448940 SMIM22K7EJ46 135 aa6.02□□□□□ -1.45
CDC42BPA-209ENST00000448940 COBLO75128 1261 aa6.02□□□□□ -1.45
CDC42BPA-209ENST00000448940 ING5Q8WYH8 240 aa6.02□□□□□ -1.45
CDC42BPA-209ENST00000448940 BAP1Q92560 729 aa6.02□□□□□ -1.45
CDC42BPA-209ENST00000448940 LIMD1Q9UGP4 676 aa6.02□□□□□ -1.45
CDC42BPA-209ENST00000448940 ST3GAL5Q9UNP4 418 aa6.02□□□□□ -1.45
CDC42BPA-209ENST00000448940 NT5C1B-RDH14C9J2C7 533 aa6.01□□□□□ -1.45
CDC42BPA-209ENST00000448940 PEX10O60683 326 aa6.01□□□□□ -1.45
CDC42BPA-209ENST00000448940 IL18RAPO95256 599 aa6.01□□□□□ -1.45
CDC42BPA-209ENST00000448940 SREBF1P36956 1147 aa6.01□□□□□ -1.45
CDC42BPA-209ENST00000448940 GLUD2P49448 558 aa6.01□□□□□ -1.45
CDC42BPA-209ENST00000448940 KRT81Q14533 505 aa6.01□□□□□ -1.45
CDC42BPA-209ENST00000448940 PCBP1Q15365 356 aaKnown RBP eCLIP6.01□□□□□ -1.453e-16■■■■■ 75.2
CDC42BPA-209ENST00000448940 GEN1Q17RS7 908 aa6.01□□□□□ -1.45
CDC42BPA-209ENST00000448940 KIAA0319Q5VV43 1072 aa6.01□□□□□ -1.45
CDC42BPA-209ENST00000448940 MFSD5Q6N075 450 aa6.01□□□□□ -1.45
CDC42BPA-209ENST00000448940 SLC27A1Q6PCB7 646 aa6.01□□□□□ -1.45
CDC42BPA-209ENST00000448940 NPLOC4Q8TAT6 608 aa6.01□□□□□ -1.45
CDC42BPA-209ENST00000448940 DDI1Q8WTU0 396 aa6.01□□□□□ -1.45
CDC42BPA-209ENST00000448940 GNL3Q9BVP2 549 aaKnown RBP eCLIP6.01□□□□□ -1.45
CDC42BPA-209ENST00000448940 OSBPL2Q9H1P3 480 aa6.01□□□□□ -1.45
CDC42BPA-209ENST00000448940 BLZF1Q9H2G9 400 aa6.01□□□□□ -1.45
CDC42BPA-209ENST00000448940 SEPT10Q9P0V9 454 aa6.01□□□□□ -1.45
CDC42BPA-209ENST00000448940 UXTQ9UBK9 157 aaPredicted RBP6.01□□□□□ -1.45
CDC42BPA-209ENST00000448940 DDX41Q9UJV9 622 aaKnown RBP6.01□□□□□ -1.45
CDC42BPA-209ENST00000448940 CRCPO75575 148 aa6.01□□□□□ -1.45
CDC42BPA-209ENST00000448940 BAIAP3O94812 1187 aa6.01□□□□□ -1.45
CDC42BPA-209ENST00000448940 CAVIN2O95810 425 aa6.01□□□□□ -1.45
CDC42BPA-209ENST00000448940 ERVK-21P61565 698 aa6.01□□□□□ -1.45
CDC42BPA-209ENST00000448940 UBE2HP62256 183 aa6.01□□□□□ -1.45
CDC42BPA-209ENST00000448940 CDH18Q13634 790 aa6.01□□□□□ -1.45
CDC42BPA-209ENST00000448940 NECTIN1Q15223 517 aa6.01□□□□□ -1.45
CDC42BPA-209ENST00000448940 POTEDQ86YR6 584 aa6.01□□□□□ -1.45
CDC42BPA-209ENST00000448940 EFHBQ8N7U6 833 aa6.01□□□□□ -1.45
CDC42BPA-209ENST00000448940 RSPH1Q8WYR4 309 aa6.01□□□□□ -1.45
CDC42BPA-209ENST00000448940 MCRS1Q96EZ8 462 aa6.01□□□□□ -1.45
CDC42BPA-209ENST00000448940 CCDC68Q9H2F9 335 aa6.01□□□□□ -1.45
CDC42BPA-209ENST00000448940 TLR9Q9NR96 1032 aa6.01□□□□□ -1.45
CDC42BPA-209ENST00000448940 FERP16591 822 aa6.01□□□□□ -1.45
CDC42BPA-209ENST00000448940 MFAP3P55082 362 aa6.01□□□□□ -1.45
CDC42BPA-209ENST00000448940 PAK1Q13153 545 aa6.01□□□□□ -1.45
CDC42BPA-209ENST00000448940 GBP6Q6ZN66 633 aa6.01□□□□□ -1.45
CDC42BPA-209ENST00000448940 ZNF771Q7L3S4 317 aaPredicted RBP6.01□□□□□ -1.45
CDC42BPA-209ENST00000448940 SH3BP5LQ7L8J4 393 aa6.01□□□□□ -1.45
CDC42BPA-209ENST00000448940 NIPA1Q7RTP0 329 aa6.01□□□□□ -1.45
CDC42BPA-209ENST00000448940 NPAS4Q8IUM7 802 aa6.01□□□□□ -1.45
CDC42BPA-209ENST00000448940 HELQQ8TDG4 1101 aa6.01□□□□□ -1.45
CDC42BPA-209ENST00000448940 TRAPPC12Q8WVT3 735 aa6.01□□□□□ -1.45
CDC42BPA-209ENST00000448940 LRRC46Q96FV0 321 aa6.01□□□□□ -1.45
CDC42BPA-209ENST00000448940 TEPSINQ96N21 525 aa6.01□□□□□ -1.45
CDC42BPA-209ENST00000448940 NUCKS1Q9H1E3 243 aaKnown RBP6.01□□□□□ -1.45
CDC42BPA-209ENST00000448940 C17orf75Q9HAS0 396 aa6.01□□□□□ -1.45
CDC42BPA-209ENST00000448940 TXNRD2Q9NNW7 524 aa6.01□□□□□ -1.45
CDC42BPA-209ENST00000448940 ATRNL1Q5VV63 1379 aa6.01□□□□□ -1.45
CDC42BPA-209ENST00000448940 TRAV19A0A0A6YYK7 116 aa6.01□□□□□ -1.45
CDC42BPA-209ENST00000448940 GRXCR2A6NFK2 248 aa6.01□□□□□ -1.45
CDC42BPA-209ENST00000448940 E9PMD0 336 aa6.01□□□□□ -1.45
CDC42BPA-209ENST00000448940 HIP1RO75146 1068 aa6.01□□□□□ -1.45
CDC42BPA-209ENST00000448940 ARP10275 920 aa6.01□□□□□ -1.45
CDC42BPA-209ENST00000448940 YWHAHQ04917 246 aaPredicted RBP6.01□□□□□ -1.45
CDC42BPA-209ENST00000448940 PLCL1Q15111 1095 aa6.01□□□□□ -1.45
CDC42BPA-209ENST00000448940 GLRA4Q5JXX5 417 aa6.01□□□□□ -1.45
CDC42BPA-209ENST00000448940 DDX12PQ92771 950 aa6.01□□□□□ -1.45
CDC42BPA-209ENST00000448940 KIAA1143Q96AT1 154 aaPredicted RBP6.01□□□□□ -1.45
CDC42BPA-209ENST00000448940 CACNA1BQ00975 2339 aa6.01□□□□□ -1.45
CDC42BPA-209ENST00000448940 DCXO43602 365 aa6.01□□□□□ -1.45
CDC42BPA-209ENST00000448940 RASGRP1O95267 797 aa6.01□□□□□ -1.45
CDC42BPA-209ENST00000448940 MOCS2O96007 188 aaPredicted RBP6.01□□□□□ -1.45
CDC42BPA-209ENST00000448940 NPY2RP49146 381 aa6.01□□□□□ -1.45
CDC42BPA-209ENST00000448940 SEC13P55735 322 aa6.01□□□□□ -1.45
CDC42BPA-209ENST00000448940 CCDC122Q5T0U0 273 aa6.01□□□□□ -1.45
CDC42BPA-209ENST00000448940 OR6B2Q6IFH4 312 aa6.01□□□□□ -1.45
CDC42BPA-209ENST00000448940 TSHZ1Q6ZSZ6 1077 aa6.01□□□□□ -1.45
CDC42BPA-209ENST00000448940 CYP2U1Q7Z449 544 aa6.01□□□□□ -1.45
CDC42BPA-209ENST00000448940 TRMT11Q7Z4G4 463 aaKnown RBP6.01□□□□□ -1.45
CDC42BPA-209ENST00000448940 CDR2LQ86X02 465 aaPredicted RBP6.01□□□□□ -1.45
CDC42BPA-209ENST00000448940 SUN3Q8TAQ9 357 aa6.01□□□□□ -1.45
CDC42BPA-209ENST00000448940 CHST12Q9NRB3 414 aa6.01□□□□□ -1.45
CDC42BPA-209ENST00000448940 LMO7Q8WWI1 1683 aa6.01□□□□□ -1.45
CDC42BPA-209ENST00000448940 A0A087WWV3 80 aa6.01□□□□□ -1.45
CDC42BPA-209ENST00000448940 AXIN1O15169 862 aa6.01□□□□□ -1.45
CDC42BPA-209ENST00000448940 GDI1P31150 447 aa6.01□□□□□ -1.45
CDC42BPA-209ENST00000448940 C10orf120Q5SQS8 335 aa6.01□□□□□ -1.45
CDC42BPA-209ENST00000448940 KIAA2013Q8IYS2 634 aa6.01□□□□□ -1.45
CDC42BPA-209ENST00000448940 ALKBH8Q96BT7 664 aaKnown RBP6.01□□□□□ -1.45
CDC42BPA-209ENST00000448940 PFDN4Q9NQP4 134 aa6.01□□□□□ -1.45
CDC42BPA-209ENST00000448940 EDARQ9UNE0 448 aa6.01□□□□□ -1.45
CDC42BPA-209ENST00000448940 DDX52Q9Y2R4 599 aaKnown RBP eCLIP6.01□□□□□ -1.45
CDC42BPA-209ENST00000448940 RGPD8O14715 1765 aaPredicted RBP6.01□□□□□ -1.45
CDC42BPA-209ENST00000448940 H0Y626 953 aa6□□□□□ -1.45
Retrieved 100 of 20,778 RNA–protein pairs in 21.7 ms