RNA–Protein interactions for RNA: ENST00000447375.1

SSR4-205, Transcript of signal sequence receptor subunit 4, humanhuman

TSL 2

Gene SSR4, Length 427 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSR4-205ENST00000447375 CSRNP2Q9H175 543 aa13.72□□□□□ -0.21
SSR4-205ENST00000447375 POLR3FQ9H1D9 316 aaPredicted RBP13.72□□□□□ -0.21
SSR4-205ENST00000447375 MINDY3Q9H8M7 445 aa13.72□□□□□ -0.21
SSR4-205ENST00000447375 GPRC5CQ9NQ84 441 aa13.72□□□□□ -0.21
SSR4-205ENST00000447375 CHST12Q9NRB3 414 aa13.72□□□□□ -0.21
SSR4-205ENST00000447375 SSX2IPQ9Y2D8 614 aa13.72□□□□□ -0.21
SSR4-205ENST00000447375 ZDHHC9Q9Y397 364 aa13.72□□□□□ -0.21
SSR4-205ENST00000447375 ZFP37Q9Y6Q3 630 aaPredicted RBP13.72□□□□□ -0.21
SSR4-205ENST00000447375 ASPMQ8IZT6 3477 aa13.71□□□□□ -0.21
SSR4-205ENST00000447375 NCAM2O15394 837 aa13.71□□□□□ -0.21
SSR4-205ENST00000447375 LRP3O75074 770 aa13.71□□□□□ -0.21
SSR4-205ENST00000447375 URODP06132 367 aa13.71□□□□□ -0.21
SSR4-205ENST00000447375 RETP07949 1114 aa13.71□□□□□ -0.21
SSR4-205ENST00000447375 SPATA31D3P0C874 917 aa13.71□□□□□ -0.21
SSR4-205ENST00000447375 CAPSQ13938 189 aa13.71□□□□□ -0.21
SSR4-205ENST00000447375 PCBP1Q15365 356 aaKnown RBP eCLIP13.71□□□□□ -0.218e-6■□□□□ 10.9
SSR4-205ENST00000447375 ZRSR1Q15695 479 aaKnown RBP13.71□□□□□ -0.21
SSR4-205ENST00000447375 RINT1Q6NUQ1 792 aa13.71□□□□□ -0.21
SSR4-205ENST00000447375 PRR23CQ6ZRP0 262 aa13.71□□□□□ -0.21
SSR4-205ENST00000447375 SPATA31D4Q6ZUB0 917 aa13.71□□□□□ -0.21
SSR4-205ENST00000447375 SYT2Q8N9I0 419 aaPredicted RBP13.71□□□□□ -0.21
SSR4-205ENST00000447375 HDAC7Q8WUI4 952 aa13.71□□□□□ -0.21
SSR4-205ENST00000447375 CLDN23Q96B33 292 aa13.71□□□□□ -0.21
SSR4-205ENST00000447375 CALML4Q96GE6 196 aa13.71□□□□□ -0.21
SSR4-205ENST00000447375 CDK5RAP3Q96JB5 506 aa13.71□□□□□ -0.21
SSR4-205ENST00000447375 CLIC6Q96NY7 704 aa13.71□□□□□ -0.21
SSR4-205ENST00000447375 NELL2Q99435 816 aa13.71□□□□□ -0.21
SSR4-205ENST00000447375 PLIN2Q99541 437 aa13.71□□□□□ -0.21
SSR4-205ENST00000447375 TRAIPQ9BWF2 469 aa13.71□□□□□ -0.21
SSR4-205ENST00000447375 PRMT8Q9NR22 394 aaPredicted RBP13.71□□□□□ -0.21
SSR4-205ENST00000447375 SEMA4GQ9NTN9 838 aa13.71□□□□□ -0.21
SSR4-205ENST00000447375 FAN1Q9Y2M0 1017 aa13.71□□□□□ -0.21
SSR4-205ENST00000447375 MIA3Q5JRA6 1907 aa13.7□□□□□ -0.22
SSR4-205ENST00000447375 COL4A3Q01955 1670 aa13.7□□□□□ -0.22
SSR4-205ENST00000447375 SPTLC2O15270 562 aa13.7□□□□□ -0.22
SSR4-205ENST00000447375 GDF9O60383 454 aa13.7□□□□□ -0.22
SSR4-205ENST00000447375 B4GALT3O60512 393 aa13.7□□□□□ -0.22
SSR4-205ENST00000447375 PPP6R2O75170 966 aa13.7□□□□□ -0.22
SSR4-205ENST00000447375 PAPLNO95428 1278 aa13.7□□□□□ -0.22
SSR4-205ENST00000447375 YEATS4O95619 227 aa13.7□□□□□ -0.22
SSR4-205ENST00000447375 SOD2P04179 222 aa13.7□□□□□ -0.22
SSR4-205ENST00000447375 SKIP12755 728 aa13.7□□□□□ -0.22
SSR4-205ENST00000447375 HOXA11P31270 313 aaPredicted RBP13.7□□□□□ -0.22
SSR4-205ENST00000447375 RPS9P46781 194 aaKnown RBP13.7□□□□□ -0.22
SSR4-205ENST00000447375 NRLP54845 237 aa13.7□□□□□ -0.22
SSR4-205ENST00000447375 SLC12A3P55017 1021 aa13.7□□□□□ -0.22
SSR4-205ENST00000447375 PFKPQ01813 784 aa13.7□□□□□ -0.22
SSR4-205ENST00000447375 STK38Q15208 465 aa13.7□□□□□ -0.22
SSR4-205ENST00000447375 IL31Q6EBC2 164 aa13.7□□□□□ -0.22
SSR4-205ENST00000447375 PRR23BQ6ZRT6 265 aa13.7□□□□□ -0.22
SSR4-205ENST00000447375 C1orf186Q6ZWK4 172 aa13.7□□□□□ -0.22
SSR4-205ENST00000447375 USP49Q70CQ1 688 aa13.7□□□□□ -0.22
SSR4-205ENST00000447375 CATSPER4Q7RTX7 472 aa13.7□□□□□ -0.22
SSR4-205ENST00000447375 KRI1Q8N9T8 703 aaKnown RBP13.7□□□□□ -0.22
SSR4-205ENST00000447375 LRRC15Q8TF66 581 aa13.7□□□□□ -0.22
SSR4-205ENST00000447375 KIFAP3Q92845 792 aa13.7□□□□□ -0.22
SSR4-205ENST00000447375 EPSTI1Q96J88 318 aa13.7□□□□□ -0.22
SSR4-205ENST00000447375 FAM193BQ96PV7 902 aaPredicted RBP13.7□□□□□ -0.22
SSR4-205ENST00000447375 PLEKHA4Q9H4M7 779 aa13.7□□□□□ -0.22
SSR4-205ENST00000447375 PATJQ8NI35 1801 aa13.69□□□□□ -0.22
SSR4-205ENST00000447375 MEIS3P2A8K0S8 358 aa13.69□□□□□ -0.22
SSR4-205ENST00000447375 DDHD2O94830 711 aa13.69□□□□□ -0.22
SSR4-205ENST00000447375 PLA2G4BP0C869 781 aa13.69□□□□□ -0.22
SSR4-205ENST00000447375 FSHRP23945 695 aa13.69□□□□□ -0.22
SSR4-205ENST00000447375 GUCY2CP25092 1073 aa13.69□□□□□ -0.22
SSR4-205ENST00000447375 TARSP26639 723 aaKnown RBP13.69□□□□□ -0.22
SSR4-205ENST00000447375 MBTD1Q05BQ5 628 aa13.69□□□□□ -0.22
SSR4-205ENST00000447375 MTAPQ13126 283 aa13.69□□□□□ -0.22
SSR4-205ENST00000447375 PPP2R5AQ15172 486 aa13.69□□□□□ -0.22
SSR4-205ENST00000447375 CSRP2Q16527 193 aa13.69□□□□□ -0.22
SSR4-205ENST00000447375 TWF2Q6IBS0 349 aaKnown RBP13.69□□□□□ -0.22
SSR4-205ENST00000447375 TAS1R1Q7RTX1 841 aa13.69□□□□□ -0.22
SSR4-205ENST00000447375 PALB2Q86YC2 1186 aa13.69□□□□□ -0.22
SSR4-205ENST00000447375 DAW1Q8N136 415 aa13.69□□□□□ -0.22
SSR4-205ENST00000447375 URGCPQ8TCY9 931 aa13.69□□□□□ -0.22
SSR4-205ENST00000447375 BSNDQ8WZ55 320 aa13.69□□□□□ -0.22
SSR4-205ENST00000447375 TMEM175Q9BSA9 504 aa13.69□□□□□ -0.22
SSR4-205ENST00000447375 RUSC1Q9BVN2 902 aa13.69□□□□□ -0.22
SSR4-205ENST00000447375 HERC2P3Q9BVR0 1158 aa13.69□□□□□ -0.22
SSR4-205ENST00000447375 TIPINQ9BVW5 301 aa13.69□□□□□ -0.22
SSR4-205ENST00000447375 PRKD2Q9BZL6 878 aa13.69□□□□□ -0.22
SSR4-205ENST00000447375 RXFP1Q9HBX9 757 aa13.69□□□□□ -0.22
SSR4-205ENST00000447375 AGPAT5Q9NUQ2 364 aa13.69□□□□□ -0.22
SSR4-205ENST00000447375 ZDHHC7Q9NXF8 308 aa13.69□□□□□ -0.22
SSR4-205ENST00000447375 KCND2Q9NZV8 630 aa13.69□□□□□ -0.22
SSR4-205ENST00000447375 CFAP45Q9UL16 551 aa13.69□□□□□ -0.22
SSR4-205ENST00000447375 ZMIZ1Q9ULJ6 1067 aa13.69□□□□□ -0.22
SSR4-205ENST00000447375 FAM208BQ5VWN6 2430 aa13.68□□□□□ -0.22
SSR4-205ENST00000447375 INO80B-WBP1J3KQ70 363 aa13.68□□□□□ -0.22
SSR4-205ENST00000447375 NRP1O14786 923 aa13.68□□□□□ -0.22
SSR4-205ENST00000447375 ZNF623O75123 536 aa13.68□□□□□ -0.22
SSR4-205ENST00000447375 PLCG1P19174 1290 aa13.68□□□□□ -0.22
SSR4-205ENST00000447375 DDIT3P35638 169 aa13.68□□□□□ -0.22
SSR4-205ENST00000447375 NAMPTP43490 491 aa13.68□□□□□ -0.22
SSR4-205ENST00000447375 KARSQ15046 597 aaKnown RBP13.68□□□□□ -0.22
SSR4-205ENST00000447375 AMHR2Q16671 573 aa13.68□□□□□ -0.22
SSR4-205ENST00000447375 FOXD4L6Q3SYB3 417 aaPredicted RBP13.68□□□□□ -0.22
SSR4-205ENST00000447375 ARSHQ5FYA8 562 aa13.68□□□□□ -0.22
SSR4-205ENST00000447375 CDCA2Q69YH5 1023 aaPredicted RBP13.68□□□□□ -0.22
SSR4-205ENST00000447375 FOXD4L3Q6VB84 417 aaPredicted RBP13.68□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 50.3 ms