RNA–Protein interactions for RNA: ENST00000447267.4

SDCBP-205, Transcript of syndecan binding protein, humanhuman

TSL 3 BASIC

Gene SDCBP, Length 772 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDCBP-205ENST00000447267 OTOP3Q7RTS5 596 aa6□□□□□ -1.45
SDCBP-205ENST00000447267 LINS1Q8NG48 757 aa6□□□□□ -1.45
SDCBP-205ENST00000447267 LPIN2Q92539 896 aa6□□□□□ -1.45
SDCBP-205ENST00000447267 CASP10Q92851 521 aa6□□□□□ -1.45
SDCBP-205ENST00000447267 TMEM87BQ96K49 555 aa6□□□□□ -1.45
SDCBP-205ENST00000447267 ALG1Q9BT22 464 aa6□□□□□ -1.45
SDCBP-205ENST00000447267 WDR11Q9BZH6 1224 aa6□□□□□ -1.45
SDCBP-205ENST00000447267 RAVER2Q9HCJ3 691 aaKnown RBP6□□□□□ -1.45
SDCBP-205ENST00000447267 GNL3LQ9NVN8 582 aaKnown RBP6□□□□□ -1.45
SDCBP-205ENST00000447267 AATFQ9NY61 560 aaKnown RBP eCLIP6□□□□□ -1.45
SDCBP-205ENST00000447267 TRIP12Q14669 1992 aaPredicted RBP6□□□□□ -1.45
SDCBP-205ENST00000447267 FLT1P17948 1338 aa5.99□□□□□ -1.45
SDCBP-205ENST00000447267 IL16Q14005 1332 aa5.99□□□□□ -1.45
SDCBP-205ENST00000447267 MYH13Q9UKX3 1938 aa5.99□□□□□ -1.45
SDCBP-205ENST00000447267 PTPRQQ9UMZ3 2332 aa5.99□□□□□ -1.45
SDCBP-205ENST00000447267 FREM2Q5SZK8 3169 aa5.99□□□□□ -1.45
SDCBP-205ENST00000447267 TANC1Q9C0D5 1861 aa5.99□□□□□ -1.45
SDCBP-205ENST00000447267 SPAARA0A1B0GVQ0 90 aa5.99□□□□□ -1.45
SDCBP-205ENST00000447267 ASB14A6NK59 587 aa5.99□□□□□ -1.45
SDCBP-205ENST00000447267 SHISA7A6NL88 538 aa5.99□□□□□ -1.45
SDCBP-205ENST00000447267 UPK3BL1B0FP48 263 aa5.99□□□□□ -1.45
SDCBP-205ENST00000447267 CHURC1-FNTBB4DL54 471 aa5.99□□□□□ -1.45
SDCBP-205ENST00000447267 UPK3BL2E5RIL1 263 aa5.99□□□□□ -1.45
SDCBP-205ENST00000447267 DGKIO75912 1065 aa5.99□□□□□ -1.45
SDCBP-205ENST00000447267 HLA-DOAP06340 250 aa5.99□□□□□ -1.45
SDCBP-205ENST00000447267 LDHCP07864 332 aa5.99□□□□□ -1.45
SDCBP-205ENST00000447267 PPP2R1AP30153 589 aa5.99□□□□□ -1.45
SDCBP-205ENST00000447267 ADORA1P30542 326 aa5.99□□□□□ -1.45
SDCBP-205ENST00000447267 HOXC13P31276 330 aa5.99□□□□□ -1.45
SDCBP-205ENST00000447267 COPB2P35606 906 aa5.99□□□□□ -1.45
SDCBP-205ENST00000447267 FNTBP49356 437 aa5.99□□□□□ -1.45
SDCBP-205ENST00000447267 RASGRF1Q13972 1273 aa5.99□□□□□ -1.45
SDCBP-205ENST00000447267 KCNMB1Q16558 191 aa5.99□□□□□ -1.45
SDCBP-205ENST00000447267 CCDC30Q5VVM6 783 aa5.99□□□□□ -1.45
SDCBP-205ENST00000447267 SPTY2D1Q68D10 685 aaPredicted RBP5.99□□□□□ -1.45
SDCBP-205ENST00000447267 PCSK4Q6UW60 755 aa5.99□□□□□ -1.45
SDCBP-205ENST00000447267 BNC2Q6ZN30 1099 aaPredicted RBP5.99□□□□□ -1.45
SDCBP-205ENST00000447267 PIP4K2CQ8TBX8 421 aa5.99□□□□□ -1.45
SDCBP-205ENST00000447267 RASGRP4Q8TDF6 673 aa5.99□□□□□ -1.45
SDCBP-205ENST00000447267 KAT2BQ92831 832 aa5.99□□□□□ -1.45
SDCBP-205ENST00000447267 UBE2FQ969M7 185 aa5.99□□□□□ -1.45
SDCBP-205ENST00000447267 NSUN4Q96CB9 384 aaKnown RBP5.99□□□□□ -1.45
SDCBP-205ENST00000447267 KAZALD1Q96I82 304 aa5.99□□□□□ -1.45
SDCBP-205ENST00000447267 SUCLG2Q96I99 432 aa5.99□□□□□ -1.45
SDCBP-205ENST00000447267 TEX13BQ9BXU2 312 aa5.99□□□□□ -1.45
SDCBP-205ENST00000447267 MIR1-1HGQ9H1L0 117 aa5.99□□□□□ -1.45
SDCBP-205ENST00000447267 PRMT8Q9NR22 394 aaPredicted RBP5.99□□□□□ -1.45
SDCBP-205ENST00000447267 HOMER2Q9NSB8 354 aa5.99□□□□□ -1.45
SDCBP-205ENST00000447267 TMEM260Q9NX78 707 aa5.99□□□□□ -1.45
SDCBP-205ENST00000447267 HCFC2Q9Y5Z7 792 aa5.99□□□□□ -1.45
SDCBP-205ENST00000447267 EMSYQ7Z589 1322 aa5.99□□□□□ -1.45
SDCBP-205ENST00000447267 MICAL3Q7RTP6 2002 aa5.98□□□□□ -1.45
SDCBP-205ENST00000447267 FAM221AA4D161 298 aa5.98□□□□□ -1.45
SDCBP-205ENST00000447267 F5H6K3 240 aa5.98□□□□□ -1.45
SDCBP-205ENST00000447267 ENPP3O14638 875 aa5.98□□□□□ -1.45
SDCBP-205ENST00000447267 SLC28A2O43868 658 aa5.98□□□□□ -1.45
SDCBP-205ENST00000447267 FGF18O76093 207 aa5.98□□□□□ -1.45
SDCBP-205ENST00000447267 MAP4K4O95819 1239 aaPredicted RBP5.98□□□□□ -1.45
SDCBP-205ENST00000447267 SHMT1P34896 483 aa5.98□□□□□ -1.45
SDCBP-205ENST00000447267 RPL6Q02878 288 aaKnown RBP5.98□□□□□ -1.45
SDCBP-205ENST00000447267 MLANAQ16655 118 aa5.98□□□□□ -1.45
SDCBP-205ENST00000447267 FAM83BQ5T0W9 1011 aa5.98□□□□□ -1.45
SDCBP-205ENST00000447267 HEATR6Q6AI08 1181 aaKnown RBP5.98□□□□□ -1.45
SDCBP-205ENST00000447267 TSPYL6Q8N831 410 aa5.98□□□□□ -1.45
SDCBP-205ENST00000447267 DNAAF4Q8WXU2 420 aa5.98□□□□□ -1.45
SDCBP-205ENST00000447267 FAM126AQ9BYI3 521 aaPredicted RBP5.98□□□□□ -1.45
SDCBP-205ENST00000447267 KRTAP4-7Q9BYR0 210 aa5.98□□□□□ -1.45
SDCBP-205ENST00000447267 TRIM4Q9C037 500 aa5.98□□□□□ -1.45
SDCBP-205ENST00000447267 DUSP15Q9H1R2 295 aaPredicted RBP5.98□□□□□ -1.45
SDCBP-205ENST00000447267 BCAS3Q9H6U6 928 aa5.98□□□□□ -1.45
SDCBP-205ENST00000447267 RAI14Q9P0K7 980 aa5.98□□□□□ -1.45
SDCBP-205ENST00000447267 ZSWIM5Q9P217 1185 aa5.98□□□□□ -1.45
SDCBP-205ENST00000447267 KALRNO60229 2985 aa5.98□□□□□ -1.45
SDCBP-205ENST00000447267 MYH2Q9UKX2 1941 aa5.97□□□□□ -1.45
SDCBP-205ENST00000447267 FSD2A1L4K1 749 aa5.97□□□□□ -1.45
SDCBP-205ENST00000447267 FAM221BA6H8Z2 402 aa5.97□□□□□ -1.45
SDCBP-205ENST00000447267 LRRC10BA6NIK2 292 aa5.97□□□□□ -1.45
SDCBP-205ENST00000447267 CAPN9O14815 690 aa5.97□□□□□ -1.45
SDCBP-205ENST00000447267 KPNA6O60684 536 aa5.97□□□□□ -1.45
SDCBP-205ENST00000447267 CLASP2O75122 1294 aaKnown RBP5.97□□□□□ -1.45
SDCBP-205ENST00000447267 KRT1P04264 644 aa5.97□□□□□ -1.45
SDCBP-205ENST00000447267 IBSPP21815 317 aaPredicted RBP5.97□□□□□ -1.45
SDCBP-205ENST00000447267 ITPKBP27987 946 aa5.97□□□□□ -1.45
SDCBP-205ENST00000447267 GBP2P32456 591 aaPredicted RBP5.97□□□□□ -1.45
SDCBP-205ENST00000447267 CSRP3P50461 194 aa5.97□□□□□ -1.45
SDCBP-205ENST00000447267 GPC5P78333 572 aa5.97□□□□□ -1.45
SDCBP-205ENST00000447267 CCDC27Q2M243 656 aa5.97□□□□□ -1.45
SDCBP-205ENST00000447267 GAB4Q2WGN9 574 aa5.97□□□□□ -1.45
SDCBP-205ENST00000447267 BRDTQ58F21 947 aaPredicted RBP5.97□□□□□ -1.45
SDCBP-205ENST00000447267 RALGPS1Q5JS13 557 aa5.97□□□□□ -1.45
SDCBP-205ENST00000447267 DAB2IPQ5VWQ8 1189 aa5.97□□□□□ -1.45
SDCBP-205ENST00000447267 SPOCD1Q6ZMY3 1216 aa5.97□□□□□ -1.45
SDCBP-205ENST00000447267 CCDC149Q6ZUS6 474 aa5.97□□□□□ -1.45
SDCBP-205ENST00000447267 CEP68Q76N32 757 aa5.97□□□□□ -1.45
SDCBP-205ENST00000447267 THAP5Q7Z6K1 395 aa5.97□□□□□ -1.45
SDCBP-205ENST00000447267 SESTD1Q86VW0 696 aa5.97□□□□□ -1.45
SDCBP-205ENST00000447267 MCATQ8IVS2 390 aaKnown RBP5.97□□□□□ -1.45
SDCBP-205ENST00000447267 C7orf31Q8N865 590 aa5.97□□□□□ -1.45
SDCBP-205ENST00000447267 AFG1LQ8WV93 481 aa5.97□□□□□ -1.45
SDCBP-205ENST00000447267 SHDQ96IW2 340 aa5.97□□□□□ -1.45
Retrieved 100 of 20,778 RNA–protein pairs in 19.4 ms