RNA–Protein interactions for RNA: ENST00000446312.5

DDR1-238, Transcript of discoidin domain receptor tyrosine kinase 1, human

TSL 5 BASIC

Gene DDR1, Length 3,202 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
DDR1-238	ENST00000446312	GAK	O14976	1311 aa		13.35	□□□□□ -0.27
DDR1-238	ENST00000446312	MYH11	P35749	1972 aa		13.35	□□□□□ -0.27
DDR1-238	ENST00000446312	PIK3R2	O00459	728 aa		13.35	□□□□□ -0.27
DDR1-238	ENST00000446312	SUN1	O94901	812 aa		13.35	□□□□□ -0.27
DDR1-238	ENST00000446312	POLR2M	P0CAP2	368 aa		13.35	□□□□□ -0.27
DDR1-238	ENST00000446312	CHRNA5	P30532	468 aa		13.35	□□□□□ -0.27
DDR1-238	ENST00000446312	CHRNA3	P32297	505 aa		13.35	□□□□□ -0.27
DDR1-238	ENST00000446312	ACOT2	P49753	483 aa		13.35	□□□□□ -0.27
DDR1-238	ENST00000446312	EIF3B	P55884	814 aa	Known RBP	13.35	□□□□□ -0.27
DDR1-238	ENST00000446312	SLC8A3	P57103	927 aa		13.35	□□□□□ -0.27
DDR1-238	ENST00000446312	XRCC4	Q13426	336 aa		13.35	□□□□□ -0.27
DDR1-238	ENST00000446312	EFTUD2	Q15029	972 aa	Known RBP eCLIP	13.35	□□□□□ -0.27	4e-6	■■■■□ 22.5
DDR1-238	ENST00000446312	AOC3	Q16853	763 aa		13.35	□□□□□ -0.27
DDR1-238	ENST00000446312	SGSM1	Q2NKQ1	1148 aa		13.35	□□□□□ -0.27
DDR1-238	ENST00000446312	HAUS6	Q7Z4H7	955 aa		13.35	□□□□□ -0.27
DDR1-238	ENST00000446312	ANKS1B	Q7Z6G8	1248 aa		13.35	□□□□□ -0.27
DDR1-238	ENST00000446312	TTC8	Q8TAM2	541 aa		13.35	□□□□□ -0.27
DDR1-238	ENST00000446312	TSC22D3	Q99576	134 aa		13.35	□□□□□ -0.27
DDR1-238	ENST00000446312	FHDC1	Q9C0D6	1143 aa	Predicted RBP	13.35	□□□□□ -0.27
DDR1-238	ENST00000446312	XPO5	Q9HAV4	1204 aa	Known RBP eCLIP	13.35	□□□□□ -0.27
DDR1-238	ENST00000446312	HOMER3	Q9NSC5	361 aa		13.35	□□□□□ -0.27
DDR1-238	ENST00000446312	SREBF1	P36956	1147 aa		13.34	□□□□□ -0.27
DDR1-238	ENST00000446312	PRELP	P51888	382 aa		13.34	□□□□□ -0.27
DDR1-238	ENST00000446312	MGAT5	Q09328	741 aa		13.34	□□□□□ -0.27
DDR1-238	ENST00000446312	ORC1	Q13415	861 aa		13.34	□□□□□ -0.27
DDR1-238	ENST00000446312	INTS8	Q75QN2	995 aa	Known RBP	13.34	□□□□□ -0.27
DDR1-238	ENST00000446312	PI4KB	Q9UBF8	816 aa		13.34	□□□□□ -0.27
DDR1-238	ENST00000446312	ZNF148	Q9UQR1	794 aa		13.34	□□□□□ -0.27
DDR1-238	ENST00000446312	KIAA1551	Q9HCM1	1747 aa		13.34	□□□□□ -0.27
DDR1-238	ENST00000446312	hCG_1984214	I3L0E3	225 aa		13.34	□□□□□ -0.27
DDR1-238	ENST00000446312	PDE6C	P51160	858 aa		13.34	□□□□□ -0.27
DDR1-238	ENST00000446312	SCNN1B	P51168	640 aa		13.34	□□□□□ -0.27
DDR1-238	ENST00000446312	FMO1	Q01740	532 aa		13.34	□□□□□ -0.27
DDR1-238	ENST00000446312	SMTNL2	Q2TAL5	461 aa		13.34	□□□□□ -0.27
DDR1-238	ENST00000446312	TAOK1	Q7L7X3	1001 aa		13.34	□□□□□ -0.27
DDR1-238	ENST00000446312	ZNF713	Q8N859	430 aa	Predicted RBP	13.34	□□□□□ -0.27
DDR1-238	ENST00000446312	ZNF570	Q96NI8	536 aa		13.34	□□□□□ -0.27
DDR1-238	ENST00000446312	SYNGAP1	Q96PV0	1343 aa		13.34	□□□□□ -0.27
DDR1-238	ENST00000446312		A0A1W2PPM1	405 aa		13.34	□□□□□ -0.27
DDR1-238	ENST00000446312	ENTPD5	O75356	428 aa		13.34	□□□□□ -0.27
DDR1-238	ENST00000446312	RTN3	O95197	1032 aa	Predicted RBP	13.34	□□□□□ -0.27
DDR1-238	ENST00000446312	TNNI1	P19237	187 aa		13.34	□□□□□ -0.27
DDR1-238	ENST00000446312	PCK1	P35558	622 aa		13.34	□□□□□ -0.27
DDR1-238	ENST00000446312	STAT2	P52630	851 aa		13.34	□□□□□ -0.27
DDR1-238	ENST00000446312	TAF11	Q15544	211 aa		13.34	□□□□□ -0.27
DDR1-238	ENST00000446312	P3H1	Q32P28	736 aa		13.34	□□□□□ -0.27
DDR1-238	ENST00000446312	CEP55	Q53EZ4	464 aa		13.34	□□□□□ -0.27
DDR1-238	ENST00000446312	IZUMO3	Q5VZ72	239 aa		13.34	□□□□□ -0.27
DDR1-238	ENST00000446312	LONP2	Q86WA8	852 aa		13.34	□□□□□ -0.27
DDR1-238	ENST00000446312	FIZ1	Q96SL8	496 aa		13.34	□□□□□ -0.27
DDR1-238	ENST00000446312	BATF3	Q9NR55	127 aa		13.34	□□□□□ -0.27
DDR1-238	ENST00000446312	KLHL14	Q9P2G3	628 aa		13.34	□□□□□ -0.27
DDR1-238	ENST00000446312	CNTNAP4	Q9C0A0	1308 aa		13.33	□□□□□ -0.27
DDR1-238	ENST00000446312	SCN7A	Q01118	1682 aa		13.33	□□□□□ -0.28
DDR1-238	ENST00000446312	MAFG	O15525	162 aa		13.33	□□□□□ -0.28
DDR1-238	ENST00000446312	MGRN1	O60291	552 aa		13.33	□□□□□ -0.28
DDR1-238	ENST00000446312	AGT	P01019	485 aa		13.33	□□□□□ -0.28
DDR1-238	ENST00000446312	CYP11B1	P15538	503 aa		13.33	□□□□□ -0.28
DDR1-238	ENST00000446312	PEX5	P50542	639 aa		13.33	□□□□□ -0.28
DDR1-238	ENST00000446312	PAPOLA	P51003	745 aa	Known RBP	13.33	□□□□□ -0.28
DDR1-238	ENST00000446312	PKN2	Q16513	984 aa	Known RBP	13.33	□□□□□ -0.28
DDR1-238	ENST00000446312	MKL1	Q969V6	931 aa		13.33	□□□□□ -0.28
DDR1-238	ENST00000446312	FAM20A	Q96MK3	541 aa		13.33	□□□□□ -0.28
DDR1-238	ENST00000446312	NACC1	Q96RE7	527 aa		13.33	□□□□□ -0.28
DDR1-238	ENST00000446312	NPHS2	Q9NP85	383 aa		13.33	□□□□□ -0.28
DDR1-238	ENST00000446312	PAPOLB	Q9NRJ5	636 aa	Known RBP	13.33	□□□□□ -0.28
DDR1-238	ENST00000446312	NINJ2	Q9NZG7	142 aa		13.33	□□□□□ -0.28
DDR1-238	ENST00000446312	DDX60L	Q5H9U9	1706 aa	Known RBP	13.33	□□□□□ -0.28
DDR1-238	ENST00000446312	IGLV3-22	A0A075B6J6	115 aa		13.33	□□□□□ -0.28
DDR1-238	ENST00000446312	EXOC1L	A0A1B0GW35	172 aa		13.33	□□□□□ -0.28
DDR1-238	ENST00000446312	C5orf60	A6NFR6	353 aa		13.33	□□□□□ -0.28
DDR1-238	ENST00000446312	FAM187A	A6NFU0	413 aa		13.33	□□□□□ -0.28
DDR1-238	ENST00000446312	PEX10	O60683	326 aa		13.33	□□□□□ -0.28
DDR1-238	ENST00000446312	ITGB5	P18084	799 aa		13.33	□□□□□ -0.28
DDR1-238	ENST00000446312	CA4	P22748	312 aa		13.33	□□□□□ -0.28
DDR1-238	ENST00000446312	SMARCA1	P28370	1054 aa		13.33	□□□□□ -0.28
DDR1-238	ENST00000446312	EPHB2	P29323	1055 aa		13.33	□□□□□ -0.28
DDR1-238	ENST00000446312	TAS2R40	P59535	323 aa		13.33	□□□□□ -0.28
DDR1-238	ENST00000446312	MTMR2	Q13614	643 aa		13.33	□□□□□ -0.28
DDR1-238	ENST00000446312	CDR2L	Q86X02	465 aa	Predicted RBP	13.33	□□□□□ -0.28
DDR1-238	ENST00000446312	ECHDC2	Q86YB7	292 aa		13.33	□□□□□ -0.28
DDR1-238	ENST00000446312	XXYLT1	Q8NBI6	393 aa		13.33	□□□□□ -0.28
DDR1-238	ENST00000446312	TXLNGY	Q9BZA5	131 aa		13.33	□□□□□ -0.28
DDR1-238	ENST00000446312	MYLK2	Q9H1R3	596 aa		13.33	□□□□□ -0.28
DDR1-238	ENST00000446312	RAVER2	Q9HCJ3	691 aa	Known RBP	13.33	□□□□□ -0.28
DDR1-238	ENST00000446312		A0A0G2JND7	137 aa		13.32	□□□□□ -0.28
DDR1-238	ENST00000446312	GNAT1	P11488	350 aa		13.32	□□□□□ -0.28
DDR1-238	ENST00000446312	MSH2	P43246	934 aa		13.32	□□□□□ -0.28
DDR1-238	ENST00000446312	COPS2	P61201	443 aa		13.32	□□□□□ -0.28
DDR1-238	ENST00000446312	IRX4	P78413	519 aa		13.32	□□□□□ -0.28
DDR1-238	ENST00000446312	DHX34	Q14147	1143 aa	Known RBP	13.32	□□□□□ -0.28
DDR1-238	ENST00000446312	SCARA5	Q6ZMJ2	495 aa		13.32	□□□□□ -0.28
DDR1-238	ENST00000446312	ARMC9	Q7Z3E5	817 aa		13.32	□□□□□ -0.28
DDR1-238	ENST00000446312	PIGW	Q7Z7B1	504 aa		13.32	□□□□□ -0.28
DDR1-238	ENST00000446312	ANKFY1	Q9P2R3	1169 aa		13.32	□□□□□ -0.28
DDR1-238	ENST00000446312	SERPINA10	Q9UK55	444 aa		13.32	□□□□□ -0.28
DDR1-238	ENST00000446312	USP21	Q9UK80	565 aa		13.32	□□□□□ -0.28
DDR1-238	ENST00000446312	ZHX2	Q9Y6X8	837 aa		13.32	□□□□□ -0.28
DDR1-238	ENST00000446312	SLC16A3	O15427	465 aa	Known RBP	13.32	□□□□□ -0.28
DDR1-238	ENST00000446312	ATP9A	O75110	1047 aa		13.32	□□□□□ -0.28

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