RNA–Protein interactions for RNA: ENST00000445692.5

APLF-203, Transcript of aprataxin and PNKP like factor, humanhuman

TSL 5

Gene APLF, Length 3,906 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APLF-203ENST00000445692 NPEPPSP55786 919 aa12.8□□□□□ -0.36
APLF-203ENST00000445692 ZNF662Q6ZS27 426 aa12.8□□□□□ -0.36
APLF-203ENST00000445692 ZBTB33Q86T24 672 aa12.8□□□□□ -0.36
APLF-203ENST00000445692 OGFOD1Q8N543 542 aa12.8□□□□□ -0.36
APLF-203ENST00000445692 RMDN2Q96LZ7 410 aa12.8□□□□□ -0.36
APLF-203ENST00000445692 PAPOLBQ9NRJ5 636 aaKnown RBP12.8□□□□□ -0.36
APLF-203ENST00000445692 HEY2Q9UBP5 337 aa12.8□□□□□ -0.36
APLF-203ENST00000445692 MMP14P50281 582 aa12.79□□□□□ -0.36
APLF-203ENST00000445692 DLG4P78352 724 aa12.79□□□□□ -0.36
APLF-203ENST00000445692 NFIAQ12857 509 aa12.79□□□□□ -0.36
APLF-203ENST00000445692 PRKG1Q13976 671 aa12.79□□□□□ -0.36
APLF-203ENST00000445692 EPHA7Q15375 998 aa12.79□□□□□ -0.36
APLF-203ENST00000445692 SHROOM1Q2M3G4 852 aaPredicted RBP12.79□□□□□ -0.36
APLF-203ENST00000445692 DNAJC24Q6P3W2 148 aa12.79□□□□□ -0.36
APLF-203ENST00000445692 NLRP9Q7RTR0 991 aa12.79□□□□□ -0.36
APLF-203ENST00000445692 CCDC125Q86Z20 511 aa12.79□□□□□ -0.36
APLF-203ENST00000445692 MTMR9Q96QG7 549 aa12.79□□□□□ -0.36
APLF-203ENST00000445692 RPS6KC1Q96S38 1066 aa12.79□□□□□ -0.36
APLF-203ENST00000445692 TDRD3Q9H7E2 651 aaKnown RBP12.79□□□□□ -0.36
APLF-203ENST00000445692 FIS1Q9Y3D6 152 aa12.79□□□□□ -0.36
APLF-203ENST00000445692 ABCC6O95255 1503 aa12.79□□□□□ -0.36
APLF-203ENST00000445692 PFASO15067 1338 aa12.79□□□□□ -0.36
APLF-203ENST00000445692 MSH4O15457 936 aa12.79□□□□□ -0.36
APLF-203ENST00000445692 ASAP2O43150 1006 aa12.79□□□□□ -0.36
APLF-203ENST00000445692 PLA2G4FQ68DD2 849 aa12.79□□□□□ -0.36
APLF-203ENST00000445692 TRMT10CQ7L0Y3 403 aaKnown RBP12.79□□□□□ -0.36
APLF-203ENST00000445692 HAUS6Q7Z4H7 955 aa12.79□□□□□ -0.36
APLF-203ENST00000445692 BBOF1Q8ND07 529 aa12.79□□□□□ -0.36
APLF-203ENST00000445692 ATL2Q8NHH9 583 aa12.79□□□□□ -0.36
APLF-203ENST00000445692 PPP1R16BQ96T49 567 aa12.79□□□□□ -0.36
APLF-203ENST00000445692 B2RBV5 119 aa12.79□□□□□ -0.36
APLF-203ENST00000445692 CREB3O43889 395 aa12.79□□□□□ -0.36
APLF-203ENST00000445692 BANF1O75531 89 aa12.79□□□□□ -0.36
APLF-203ENST00000445692 TNFRSF8P28908 595 aa12.79□□□□□ -0.36
APLF-203ENST00000445692 LAMB3Q13751 1172 aa12.79□□□□□ -0.36
APLF-203ENST00000445692 UBAP2Q5T6F2 1119 aaKnown RBP12.79□□□□□ -0.36
APLF-203ENST00000445692 CBWD2Q8IUF1 395 aa12.79□□□□□ -0.36
APLF-203ENST00000445692 CHMP2BQ9UQN3 213 aa12.79□□□□□ -0.36
APLF-203ENST00000445692 LOC100653049A0A140TA62 436 aa12.78□□□□□ -0.36
APLF-203ENST00000445692 DENND3A2RUS2 1198 aa12.78□□□□□ -0.36
APLF-203ENST00000445692 hCG_1984214I3L0E3 225 aa12.78□□□□□ -0.36
APLF-203ENST00000445692 EML1O00423 815 aa12.78□□□□□ -0.36
APLF-203ENST00000445692 LPXNO60711 386 aa12.78□□□□□ -0.36
APLF-203ENST00000445692 KRT34O76011 436 aa12.78□□□□□ -0.36
APLF-203ENST00000445692 GHRP10912 638 aa12.78□□□□□ -0.36
APLF-203ENST00000445692 RPA1P27694 616 aa12.78□□□□□ -0.36
APLF-203ENST00000445692 XRCC4Q13426 336 aa12.78□□□□□ -0.36
APLF-203ENST00000445692 MTERF2Q49AM1 385 aa12.78□□□□□ -0.36
APLF-203ENST00000445692 SEZ6Q53EL9 994 aa12.78□□□□□ -0.36
APLF-203ENST00000445692 CCDC33Q8N5R6 958 aa12.78□□□□□ -0.36
APLF-203ENST00000445692 ZNF713Q8N859 430 aaPredicted RBP12.78□□□□□ -0.36
APLF-203ENST00000445692 DDX55Q8NHQ9 600 aaKnown RBP eCLIP12.78□□□□□ -0.36
APLF-203ENST00000445692 TRAIPQ9BWF2 469 aa12.78□□□□□ -0.36
APLF-203ENST00000445692 OSBPL8Q9BZF1 889 aa12.78□□□□□ -0.36
APLF-203ENST00000445692 ANLNQ9NQW6 1124 aa12.78□□□□□ -0.36
APLF-203ENST00000445692 SMYD2Q9NRG4 433 aa12.78□□□□□ -0.36
APLF-203ENST00000445692 ETAA1Q9NY74 926 aa12.78□□□□□ -0.36
APLF-203ENST00000445692 SEPT9Q9UHD8 586 aaPredicted RBP12.78□□□□□ -0.36
APLF-203ENST00000445692 CACNA1FO60840 1977 aa12.78□□□□□ -0.36
APLF-203ENST00000445692 CHRM1P11229 460 aaPredicted RBP12.78□□□□□ -0.36
APLF-203ENST00000445692 RRM1P23921 792 aa12.78□□□□□ -0.36
APLF-203ENST00000445692 MARK3P27448 753 aa12.78□□□□□ -0.36
APLF-203ENST00000445692 DEUP1Q05D60 604 aa12.78□□□□□ -0.36
APLF-203ENST00000445692 SF3B3Q15393 1217 aaKnown RBP12.78□□□□□ -0.36
APLF-203ENST00000445692 PKN2Q16513 984 aaKnown RBP12.78□□□□□ -0.36
APLF-203ENST00000445692 FITM2Q8N6M3 262 aa12.78□□□□□ -0.36
APLF-203ENST00000445692 ARHGEF1Q92888 912 aaKnown RBP12.78□□□□□ -0.36
APLF-203ENST00000445692 KCNQ5Q9NR82 932 aa12.78□□□□□ -0.36
APLF-203ENST00000445692 RHBDL2Q9NX52 303 aa12.78□□□□□ -0.36
APLF-203ENST00000445692 HSPBP1Q9NZL4 362 aa12.78□□□□□ -0.36
APLF-203ENST00000445692 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP12.78□□□□□ -0.36
APLF-203ENST00000445692 IPO5O00410 1097 aaKnown RBP12.78□□□□□ -0.36
APLF-203ENST00000445692 ACOT2P49753 483 aa12.78□□□□□ -0.36
APLF-203ENST00000445692 SOX10P56693 466 aa12.78□□□□□ -0.36
APLF-203ENST00000445692 TRAF1Q13077 416 aa12.78□□□□□ -0.36
APLF-203ENST00000445692 RABGAP1LQ5R372 815 aa12.78□□□□□ -0.36
APLF-203ENST00000445692 DARS2Q6PI48 645 aaKnown RBP12.78□□□□□ -0.36
APLF-203ENST00000445692 NLRX1Q86UT6 975 aa12.78□□□□□ -0.36
APLF-203ENST00000445692 PDIK1LQ8N165 341 aa12.78□□□□□ -0.36
APLF-203ENST00000445692 KIAA1683Q9H0B3 1180 aa12.78□□□□□ -0.36
APLF-203ENST00000445692 RXFP1Q9HBX9 757 aa12.78□□□□□ -0.36
APLF-203ENST00000445692 HEY1Q9Y5J3 304 aa12.78□□□□□ -0.36
APLF-203ENST00000445692 STAM2O75886 525 aa12.77□□□□□ -0.36
APLF-203ENST00000445692 ETS1P14921 441 aa12.77□□□□□ -0.36
APLF-203ENST00000445692 PRELPP51888 382 aa12.77□□□□□ -0.36
APLF-203ENST00000445692 GSCP56915 257 aaPredicted RBP12.77□□□□□ -0.36
APLF-203ENST00000445692 MTMR2Q13614 643 aa12.77□□□□□ -0.36
APLF-203ENST00000445692 CUL3Q13618 768 aa12.77□□□□□ -0.36
APLF-203ENST00000445692 FAXCQ5TGI0 409 aa12.77□□□□□ -0.36
APLF-203ENST00000445692 DUPD1Q68J44 220 aa12.77□□□□□ -0.36
APLF-203ENST00000445692 LRRC43Q8N309 656 aa12.77□□□□□ -0.36
APLF-203ENST00000445692 DNAJC18Q9H819 358 aa12.77□□□□□ -0.36
APLF-203ENST00000445692 SEPT10Q9P0V9 454 aa12.77□□□□□ -0.36
APLF-203ENST00000445692 COPEO14579 308 aa12.77□□□□□ -0.37
APLF-203ENST00000445692 TTC4O95801 387 aa12.77□□□□□ -0.37
APLF-203ENST00000445692 SERPINB2P05120 415 aa12.77□□□□□ -0.37
APLF-203ENST00000445692 ITIH2P19823 946 aa12.77□□□□□ -0.37
APLF-203ENST00000445692 TFAMQ00059 246 aaKnown RBP12.77□□□□□ -0.37
APLF-203ENST00000445692 AGGF1Q8N302 714 aaeCLIP12.77□□□□□ -0.37
APLF-203ENST00000445692 DEPTORQ8TB45 409 aa12.77□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 38.8 ms