RNA–Protein interactions for RNA: ENST00000445265.6

TCOF1-206, Transcript of treacle ribosome biogenesis factor 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene TCOF1, Length 4,825 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCOF1-206ENST00000445265 WRNIP1Q96S55 665 aa17.63■□□□□ 0.41
TCOF1-206ENST00000445265 DCTN4Q9UJW0 460 aa17.63■□□□□ 0.41
TCOF1-206ENST00000445265 TBX20Q9UMR3 447 aa17.63■□□□□ 0.41
TCOF1-206ENST00000445265 USH1CQ9Y6N9 552 aa17.63■□□□□ 0.41
TCOF1-206ENST00000445265 SYNJ2BP-COX16A0A087WUM0 186 aa17.62■□□□□ 0.41
TCOF1-206ENST00000445265 GIPC1O14908 333 aa17.62■□□□□ 0.41
TCOF1-206ENST00000445265 ACOT2P49753 483 aa17.62■□□□□ 0.41
TCOF1-206ENST00000445265 KCNMA1Q12791 1236 aa17.62■□□□□ 0.41
TCOF1-206ENST00000445265 RASIP1Q5U651 963 aa17.62■□□□□ 0.41
TCOF1-206ENST00000445265 HAS1Q92839 578 aa17.62■□□□□ 0.41
TCOF1-206ENST00000445265 MOV10L1Q9BXT6 1211 aaKnown RBP17.62■□□□□ 0.41
TCOF1-206ENST00000445265 COX16Q9P0S2 106 aa17.62■□□□□ 0.41
TCOF1-206ENST00000445265 PPARGC1AQ9UBK2 798 aaKnown RBP17.62■□□□□ 0.41
TCOF1-206ENST00000445265 RHBDL3P58872 404 aa17.62■□□□□ 0.41
TCOF1-206ENST00000445265 NT5DC3Q86UY8 548 aa17.62■□□□□ 0.41
TCOF1-206ENST00000445265 SGPL1O95470 568 aa17.62■□□□□ 0.41
TCOF1-206ENST00000445265 GLIS3Q8NEA6 775 aa17.62■□□□□ 0.41
TCOF1-206ENST00000445265 SLC5A4Q9NY91 659 aa17.62■□□□□ 0.41
TCOF1-206ENST00000445265 CHORDC1Q9UHD1 332 aaPredicted RBP17.62■□□□□ 0.41
TCOF1-206ENST00000445265 TPX2Q9ULW0 747 aaKnown RBP17.62■□□□□ 0.41
TCOF1-206ENST00000445265 HNRNPCL1O60812 293 aaKnown RBP17.61■□□□□ 0.41
TCOF1-206ENST00000445265 CAND2O75155 1236 aa17.61■□□□□ 0.41
TCOF1-206ENST00000445265 SMIM24O75264 130 aa17.61■□□□□ 0.41
TCOF1-206ENST00000445265 MAGEA4P43358 317 aa17.61■□□□□ 0.41
TCOF1-206ENST00000445265 PIGHQ14442 188 aaPredicted RBP17.61■□□□□ 0.41
TCOF1-206ENST00000445265 ZNF772Q68DY9 489 aaPredicted RBP17.61■□□□□ 0.41
TCOF1-206ENST00000445265 FOXR1Q6PIV2 292 aa17.61■□□□□ 0.41
TCOF1-206ENST00000445265 SESTD1Q86VW0 696 aa17.61■□□□□ 0.41
TCOF1-206ENST00000445265 MREGQ8N565 214 aa17.61■□□□□ 0.41
TCOF1-206ENST00000445265 TTC39CQ8N584 583 aa17.61■□□□□ 0.41
TCOF1-206ENST00000445265 SPATS2LQ9NUQ6 558 aaKnown RBP17.61■□□□□ 0.41
TCOF1-206ENST00000445265 LRRC37A3O60309 1634 aa17.61■□□□□ 0.41
TCOF1-206ENST00000445265 DDTLA6NHG4 134 aaPredicted RBP17.61■□□□□ 0.41
TCOF1-206ENST00000445265 H0Y3Z8 333 aa17.61■□□□□ 0.41
TCOF1-206ENST00000445265 LPXNO60711 386 aa17.61■□□□□ 0.41
TCOF1-206ENST00000445265 ECM2O94769 699 aaPredicted RBP17.61■□□□□ 0.41
TCOF1-206ENST00000445265 MYBL2P10244 700 aa17.61■□□□□ 0.41
TCOF1-206ENST00000445265 FECHP22830 423 aa17.61■□□□□ 0.41
TCOF1-206ENST00000445265 EVX2Q03828 476 aa17.61■□□□□ 0.41
TCOF1-206ENST00000445265 PRPSAP1Q14558 356 aa17.61■□□□□ 0.41
TCOF1-206ENST00000445265 PPP6R3Q5H9R7 873 aaPredicted RBP17.61■□□□□ 0.41
TCOF1-206ENST00000445265 TMC3Q7Z5M5 1100 aa17.61■□□□□ 0.41
TCOF1-206ENST00000445265 LRRC34Q8IZ02 419 aa17.61■□□□□ 0.41
TCOF1-206ENST00000445265 DNAAF3Q8N9W5 541 aa17.61■□□□□ 0.41
TCOF1-206ENST00000445265 ATP8B4Q8TF62 1192 aa17.61■□□□□ 0.41
TCOF1-206ENST00000445265 AGBL1Q96MI9 1066 aa17.61■□□□□ 0.41
TCOF1-206ENST00000445265 CBWD1Q9BRT8 395 aa17.61■□□□□ 0.41
TCOF1-206ENST00000445265 MID2Q9UJV3 735 aa17.61■□□□□ 0.41
TCOF1-206ENST00000445265 ARP10275 920 aa17.61■□□□□ 0.41
TCOF1-206ENST00000445265 CCNA1P78396 465 aa17.61■□□□□ 0.41
TCOF1-206ENST00000445265 NCOA4Q13772 614 aa17.61■□□□□ 0.41
TCOF1-206ENST00000445265 NLRP7Q8WX94 980 aa17.61■□□□□ 0.41
TCOF1-206ENST00000445265 ALKBH8Q96BT7 664 aaKnown RBP17.61■□□□□ 0.41
TCOF1-206ENST00000445265 CYTH2Q99418 400 aa17.61■□□□□ 0.41
TCOF1-206ENST00000445265 WHRNQ9P202 907 aa17.61■□□□□ 0.41
TCOF1-206ENST00000445265 GOLGA8QA0A0J9YX86 632 aa17.61■□□□□ 0.41
TCOF1-206ENST00000445265 GOLGA8OA6NCC3 632 aa17.61■□□□□ 0.41
TCOF1-206ENST00000445265 GOLGA8NF8WBI6 632 aa17.61■□□□□ 0.41
TCOF1-206ENST00000445265 KRT3P12035 628 aa17.61■□□□□ 0.41
TCOF1-206ENST00000445265 ROR1Q01973 937 aa17.61■□□□□ 0.41
TCOF1-206ENST00000445265 IFRD2Q12894 506 aaPredicted RBP17.61■□□□□ 0.41
TCOF1-206ENST00000445265 ITIH4Q14624 930 aa17.61■□□□□ 0.41
TCOF1-206ENST00000445265 CD302Q8IX05 232 aa17.61■□□□□ 0.41
TCOF1-206ENST00000445265 PPM1NQ8N819 430 aa17.61■□□□□ 0.41
TCOF1-206ENST00000445265 KCNMB3Q9NPA1 279 aa17.61■□□□□ 0.41
TCOF1-206ENST00000445265 WDR35Q9P2L0 1181 aa17.61■□□□□ 0.41
TCOF1-206ENST00000445265 GGT7Q9UJ14 662 aa17.61■□□□□ 0.41
TCOF1-206ENST00000445265 BTNL10A8MVZ5 291 aa17.6■□□□□ 0.41
TCOF1-206ENST00000445265 FAM86B1E9PN63 330 aa17.6■□□□□ 0.41
TCOF1-206ENST00000445265 ICAM1P05362 532 aa17.6■□□□□ 0.41
TCOF1-206ENST00000445265 FAM86B2P0C5J1 330 aa17.6■□□□□ 0.41
TCOF1-206ENST00000445265 ZNF844Q08AG5 666 aa17.6■□□□□ 0.41
TCOF1-206ENST00000445265 RSBN1LQ6PCB5 846 aaPredicted RBP17.6■□□□□ 0.41
TCOF1-206ENST00000445265 RHPN2Q8IUC4 686 aa17.6■□□□□ 0.41
TCOF1-206ENST00000445265 DDX4Q9NQI0 724 aaKnown RBP17.6■□□□□ 0.41
TCOF1-206ENST00000445265 TACC3Q9Y6A5 838 aa17.6■□□□□ 0.41
TCOF1-206ENST00000445265 SPECC1L-ADORA2AF8WAN1 911 aa17.6■□□□□ 0.41
TCOF1-206ENST00000445265 EXTL3O43909 919 aa17.6■□□□□ 0.41
TCOF1-206ENST00000445265 CYP11B1P15538 503 aa17.6■□□□□ 0.41
TCOF1-206ENST00000445265 PSMC3IPQ9P2W1 217 aaPredicted RBP17.6■□□□□ 0.41
TCOF1-206ENST00000445265 HEY1Q9Y5J3 304 aa17.6■□□□□ 0.41
TCOF1-206ENST00000445265 CHRNA5P30532 468 aa17.6■□□□□ 0.41
TCOF1-206ENST00000445265 GTF2H1P32780 548 aa17.6■□□□□ 0.41
TCOF1-206ENST00000445265 ECE1P42892 770 aa17.6■□□□□ 0.41
TCOF1-206ENST00000445265 PHKA2P46019 1235 aa17.6■□□□□ 0.41
TCOF1-206ENST00000445265 DALRD3Q5D0E6 543 aaKnown RBP17.6■□□□□ 0.41
TCOF1-206ENST00000445265 DNAAF5Q86Y56 855 aa17.6■□□□□ 0.41
TCOF1-206ENST00000445265 ACER1Q8TDN7 264 aa17.6■□□□□ 0.41
TCOF1-206ENST00000445265 FAM96AQ9H5X1 160 aa17.6■□□□□ 0.41
TCOF1-206ENST00000445265 TMX2Q9Y320 296 aa17.6■□□□□ 0.41
TCOF1-206ENST00000445265 ZC3H11AO75152 810 aaKnown RBP eCLIP17.6■□□□□ 0.41
TCOF1-206ENST00000445265 SDC4P31431 198 aa17.6■□□□□ 0.41
TCOF1-206ENST00000445265 CIITAP33076 1130 aa17.6■□□□□ 0.41
TCOF1-206ENST00000445265 BCAR1P56945 870 aa17.6■□□□□ 0.41
TCOF1-206ENST00000445265 MAP7Q14244 749 aa17.6■□□□□ 0.41
TCOF1-206ENST00000445265 PSMD6Q15008 389 aa17.6■□□□□ 0.41
TCOF1-206ENST00000445265 CYB5D1Q6P9G0 228 aa17.6■□□□□ 0.41
TCOF1-206ENST00000445265 CBWD2Q8IUF1 395 aa17.6■□□□□ 0.41
TCOF1-206ENST00000445265 AGGF1Q8N302 714 aaeCLIP17.6■□□□□ 0.418e-7■□□□□ 10.4
TCOF1-206ENST00000445265 CNOT7Q9UIV1 285 aaKnown RBP17.6■□□□□ 0.41
Retrieved 100 of 20,778 RNA–protein pairs in 19.9 ms