RNA–Protein interactions for RNA: ENST00000444508.5

SMARCAL1-209, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a like 1, humanhuman

TSL 2

Gene SMARCAL1, Length 711 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCAL1-209ENST00000444508 KIF12Q96FN5 646 aa18.99■□□□□ 0.63
SMARCAL1-209ENST00000444508 DDX27Q96GQ7 796 aaKnown RBP18.99■□□□□ 0.63
SMARCAL1-209ENST00000444508 TSPAN18Q96SJ8 248 aa18.99■□□□□ 0.63
SMARCAL1-209ENST00000444508 HERC2P3Q9BVR0 1158 aa18.99■□□□□ 0.63
SMARCAL1-209ENST00000444508 VN1R3Q9BXE9 311 aa18.99■□□□□ 0.63
SMARCAL1-209ENST00000444508 CACNG4Q9UBN1 327 aa18.99■□□□□ 0.63
SMARCAL1-209ENST00000444508 HOOK1Q9UJC3 728 aaKnown RBP18.99■□□□□ 0.63
SMARCAL1-209ENST00000444508 PDCD11Q14690 1871 aaKnown RBP18.99■□□□□ 0.63
SMARCAL1-209ENST00000444508 SF3B1O75533 1304 aaKnown RBP eCLIP18.99■□□□□ 0.63
SMARCAL1-209ENST00000444508 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP18.98■□□□□ 0.63
SMARCAL1-209ENST00000444508 C2orf71A6NGG8 1288 aa18.98■□□□□ 0.63
SMARCAL1-209ENST00000444508 HIDE1A8MVS5 230 aa18.98■□□□□ 0.63
SMARCAL1-209ENST00000444508 LACTBL1A8MY62 500 aa18.98■□□□□ 0.63
SMARCAL1-209ENST00000444508 KIAA0391O15091 583 aaKnown RBP18.98■□□□□ 0.63
SMARCAL1-209ENST00000444508 XPOTO43592 962 aaKnown RBP18.98■□□□□ 0.63
SMARCAL1-209ENST00000444508 KINO60870 393 aaKnown RBP18.98■□□□□ 0.63
SMARCAL1-209ENST00000444508 KIF4AO95239 1232 aa18.98■□□□□ 0.63
SMARCAL1-209ENST00000444508 URODP06132 367 aa18.98■□□□□ 0.63
SMARCAL1-209ENST00000444508 POU5F1Q01860 360 aaKnown RBP18.98■□□□□ 0.63
SMARCAL1-209ENST00000444508 BMT2Q1RMZ1 405 aa18.98■□□□□ 0.63
SMARCAL1-209ENST00000444508 KIAA1841Q6NSI8 718 aa18.98■□□□□ 0.63
SMARCAL1-209ENST00000444508 FUT10Q6P4F1 479 aa18.98■□□□□ 0.63
SMARCAL1-209ENST00000444508 DCLRE1AQ6PJP8 1040 aa18.98■□□□□ 0.63
SMARCAL1-209ENST00000444508 HS2ST1Q7LGA3 356 aa18.98■□□□□ 0.63
SMARCAL1-209ENST00000444508 PHF6Q8IWS0 365 aaKnown RBP eCLIP18.98■□□□□ 0.63
SMARCAL1-209ENST00000444508 NELFCDQ8IXH7 590 aa18.98■□□□□ 0.63
SMARCAL1-209ENST00000444508 MRPL43Q8N983 215 aaKnown RBP18.98■□□□□ 0.63
SMARCAL1-209ENST00000444508 NOC3LQ8WTT2 800 aaKnown RBP18.98■□□□□ 0.63
SMARCAL1-209ENST00000444508 PABPC5Q96DU9 382 aaKnown RBP18.98■□□□□ 0.63
SMARCAL1-209ENST00000444508 TIGD1Q96MW7 591 aa18.98■□□□□ 0.63
SMARCAL1-209ENST00000444508 CDCA3Q99618 268 aaPredicted RBP18.98■□□□□ 0.63
SMARCAL1-209ENST00000444508 FAM213AQ9BRX8 229 aa18.98■□□□□ 0.63
SMARCAL1-209ENST00000444508 GOLGA2P5Q9HBQ8 144 aa18.98■□□□□ 0.63
SMARCAL1-209ENST00000444508 CLDND1Q9NY35 253 aa18.98■□□□□ 0.63
SMARCAL1-209ENST00000444508 SSX2IPQ9Y2D8 614 aa18.98■□□□□ 0.63
SMARCAL1-209ENST00000444508 GADD45BO75293 160 aaPredicted RBP18.97■□□□□ 0.63
SMARCAL1-209ENST00000444508 B3GAT3O94766 335 aa18.97■□□□□ 0.63
SMARCAL1-209ENST00000444508 RPL9P32969 192 aaKnown RBP18.97■□□□□ 0.63
SMARCAL1-209ENST00000444508 HOXD13P35453 343 aa18.97■□□□□ 0.63
SMARCAL1-209ENST00000444508 CLCNKBP51801 687 aa18.97■□□□□ 0.63
SMARCAL1-209ENST00000444508 SNRPFP62306 86 aaKnown RBP18.97■□□□□ 0.63
SMARCAL1-209ENST00000444508 SOX4Q06945 474 aaPredicted RBP18.97■□□□□ 0.63
SMARCAL1-209ENST00000444508 SPAG1Q07617 926 aa18.97■□□□□ 0.63
SMARCAL1-209ENST00000444508 ELAVL2Q12926 359 aaKnown RBP18.97■□□□□ 0.63
SMARCAL1-209ENST00000444508 STK4Q13043 487 aa18.97■□□□□ 0.63
SMARCAL1-209ENST00000444508 USP41Q3LFD5 358 aa18.97■□□□□ 0.63
SMARCAL1-209ENST00000444508 HASPINQ8TF76 798 aa18.97■□□□□ 0.63
SMARCAL1-209ENST00000444508 AUTS2Q8WXX7 1259 aa18.97■□□□□ 0.63
SMARCAL1-209ENST00000444508 C18orf25Q96B23 403 aaPredicted RBP18.97■□□□□ 0.63
SMARCAL1-209ENST00000444508 SAAL1Q96ER3 474 aa18.97■□□□□ 0.63
SMARCAL1-209ENST00000444508 CBWD1Q9BRT8 395 aa18.97■□□□□ 0.63
SMARCAL1-209ENST00000444508 PCIF1Q9H4Z3 704 aa18.97■□□□□ 0.63
SMARCAL1-209ENST00000444508 ASB7Q9H672 318 aa18.97■□□□□ 0.63
SMARCAL1-209ENST00000444508 UBE2ZQ9H832 354 aaPredicted RBP18.97■□□□□ 0.63
SMARCAL1-209ENST00000444508 MRPL17Q9NRX2 175 aaKnown RBP18.97■□□□□ 0.63
SMARCAL1-209ENST00000444508 UBQLN1Q9UMX0 589 aaKnown RBP18.97■□□□□ 0.63
SMARCAL1-209ENST00000444508 IRAK3Q9Y616 596 aa18.97■□□□□ 0.63
SMARCAL1-209ENST00000444508 BRWD1Q9NSI6 2320 aa18.97■□□□□ 0.63
SMARCAL1-209ENST00000444508 TMEM189-UBE2V1I3L0A0 370 aa18.96■□□□□ 0.63
SMARCAL1-209ENST00000444508 TULP1O00294 542 aaPredicted RBP18.96■□□□□ 0.63
SMARCAL1-209ENST00000444508 PODXLO00592 558 aa18.96■□□□□ 0.63
SMARCAL1-209ENST00000444508 PER2O15055 1255 aa18.96■□□□□ 0.63
SMARCAL1-209ENST00000444508 EXTL3O43909 919 aa18.96■□□□□ 0.63
SMARCAL1-209ENST00000444508 RHOBTB3O94955 611 aa18.96■□□□□ 0.63
SMARCAL1-209ENST00000444508 KIF20AO95235 890 aa18.96■□□□□ 0.63
SMARCAL1-209ENST00000444508 IL18RAPO95256 599 aa18.96■□□□□ 0.63
SMARCAL1-209ENST00000444508 ADRB2P07550 413 aa18.96■□□□□ 0.63
SMARCAL1-209ENST00000444508 GTF2F1P35269 517 aaKnown RBP eCLIP18.96■□□□□ 0.63
SMARCAL1-209ENST00000444508 GLUD2P49448 558 aa18.96■□□□□ 0.63
SMARCAL1-209ENST00000444508 PNOCQ13519 176 aa18.96■□□□□ 0.63
SMARCAL1-209ENST00000444508 PTPN14Q15678 1187 aa18.96■□□□□ 0.63
SMARCAL1-209ENST00000444508 DUSP6Q16828 381 aa18.96■□□□□ 0.63
SMARCAL1-209ENST00000444508 UPP1Q16831 310 aa18.96■□□□□ 0.63
SMARCAL1-209ENST00000444508 KNOP1Q1ED39 458 aaKnown RBP18.96■□□□□ 0.63
SMARCAL1-209ENST00000444508 AAK1Q2M2I8 961 aa18.96■□□□□ 0.63
SMARCAL1-209ENST00000444508 GPD1LQ8N335 351 aa18.96■□□□□ 0.63
SMARCAL1-209ENST00000444508 EFHBQ8N7U6 833 aa18.96■□□□□ 0.63
SMARCAL1-209ENST00000444508 KIAA0895Q8NCT3 520 aa18.96■□□□□ 0.63
SMARCAL1-209ENST00000444508 GPR62Q9BZJ7 368 aa18.96■□□□□ 0.63
SMARCAL1-209ENST00000444508 RMND1Q9NWS8 449 aa18.96■□□□□ 0.63
SMARCAL1-209ENST00000444508 CGNQ9P2M7 1197 aaKnown RBP18.96■□□□□ 0.63
SMARCAL1-209ENST00000444508 DERAQ9Y315 318 aa18.96■□□□□ 0.63
SMARCAL1-209ENST00000444508 GOLGA8IPA6NC78 632 aa18.95■□□□□ 0.62
SMARCAL1-209ENST00000444508 GOLGA8JA6NMD2 632 aa18.95■□□□□ 0.62
SMARCAL1-209ENST00000444508 C2CD2LO14523 706 aa18.95■□□□□ 0.62
SMARCAL1-209ENST00000444508 TRAPPC3O43617 180 aa18.95■□□□□ 0.62
SMARCAL1-209ENST00000444508 SMC2O95347 1197 aa18.95■□□□□ 0.62
SMARCAL1-209ENST00000444508 EFEMP2O95967 443 aa18.95■□□□□ 0.62
SMARCAL1-209ENST00000444508 SRGAP2BP0DMP2 458 aa18.95■□□□□ 0.62
SMARCAL1-209ENST00000444508 CYP3A5P20815 502 aa18.95■□□□□ 0.62
SMARCAL1-209ENST00000444508 UBE2HP62256 183 aa18.95■□□□□ 0.62
SMARCAL1-209ENST00000444508 KCNB1Q14721 858 aa18.95■□□□□ 0.62
SMARCAL1-209ENST00000444508 COL19A1Q14993 1142 aa18.95■□□□□ 0.62
SMARCAL1-209ENST00000444508 TMEM132DQ14C87 1099 aa18.95■□□□□ 0.62
SMARCAL1-209ENST00000444508 JADE1Q6IE81 842 aa18.95■□□□□ 0.62
SMARCAL1-209ENST00000444508 CRELD2Q6UXH1 353 aaPredicted RBP18.95■□□□□ 0.62
SMARCAL1-209ENST00000444508 TAS1R1Q7RTX1 841 aa18.95■□□□□ 0.62
SMARCAL1-209ENST00000444508 RNF168Q8IYW5 571 aaPredicted RBP18.95■□□□□ 0.62
SMARCAL1-209ENST00000444508 BEST2Q8NFU1 509 aa18.95■□□□□ 0.62
SMARCAL1-209ENST00000444508 GOLGA5Q8TBA6 731 aa18.95■□□□□ 0.62
Retrieved 100 of 20,778 RNA–protein pairs in 23 ms