RNA–Protein interactions for RNA: ENST00000444166.1

COMMD1-203, Transcript of copper metabolism domain containing 1, humanhuman

TSL 3

Gene COMMD1, Length 743 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD1-203ENST00000444166 IRF7Q92985 503 aa11.19□□□□□ -0.62
COMMD1-203ENST00000444166 TCEAL4Q96EI5 215 aa11.19□□□□□ -0.62
COMMD1-203ENST00000444166 ASB16Q96NS5 453 aa11.19□□□□□ -0.62
COMMD1-203ENST00000444166 LSM14BQ9BX40 385 aaKnown RBP11.19□□□□□ -0.62
COMMD1-203ENST00000444166 NFKBIZQ9BYH8 718 aa11.19□□□□□ -0.62
COMMD1-203ENST00000444166 ZFP14Q9HCL3 533 aa11.19□□□□□ -0.62
COMMD1-203ENST00000444166 C2orf42Q9NWW7 574 aa11.19□□□□□ -0.62
COMMD1-203ENST00000444166 VPS54Q9P1Q0 977 aa11.19□□□□□ -0.62
COMMD1-203ENST00000444166 WASF3Q9UPY6 502 aa11.19□□□□□ -0.62
COMMD1-203ENST00000444166 ARID2Q68CP9 1835 aa11.19□□□□□ -0.62
COMMD1-203ENST00000444166 NCANO14594 1321 aa11.18□□□□□ -0.62
COMMD1-203ENST00000444166 WDR27A2RRH5 827 aa11.18□□□□□ -0.62
COMMD1-203ENST00000444166 M0R2N6 131 aa11.18□□□□□ -0.62
COMMD1-203ENST00000444166 DKC1O60832 514 aaKnown RBP eCLIP11.18□□□□□ -0.62
COMMD1-203ENST00000444166 MICAL2O94851 1124 aa11.18□□□□□ -0.62
COMMD1-203ENST00000444166 NPTXRO95502 500 aa11.18□□□□□ -0.62
COMMD1-203ENST00000444166 P4HBP07237 508 aaKnown RBP11.18□□□□□ -0.62
COMMD1-203ENST00000444166 IGFBP6P24592 240 aaPredicted RBP11.18□□□□□ -0.62
COMMD1-203ENST00000444166 YWHABP31946 246 aaKnown RBP11.18□□□□□ -0.62
COMMD1-203ENST00000444166 CCR2P41597 374 aa11.18□□□□□ -0.62
COMMD1-203ENST00000444166 MLLT6P55198 1093 aaPredicted RBP11.18□□□□□ -0.62
COMMD1-203ENST00000444166 SPIRE1Q08AE8 756 aa11.18□□□□□ -0.62
COMMD1-203ENST00000444166 CAPSQ13938 189 aa11.18□□□□□ -0.62
COMMD1-203ENST00000444166 TSGA10IPQ3SY00 556 aa11.18□□□□□ -0.62
COMMD1-203ENST00000444166 SLC27A1Q6PCB7 646 aa11.18□□□□□ -0.62
COMMD1-203ENST00000444166 CDR2LQ86X02 465 aaPredicted RBP11.18□□□□□ -0.62
COMMD1-203ENST00000444166 RASEFQ8IZ41 740 aa11.18□□□□□ -0.62
COMMD1-203ENST00000444166 ASAP3Q8TDY4 903 aa11.18□□□□□ -0.62
COMMD1-203ENST00000444166 LOXL4Q96JB6 756 aa11.18□□□□□ -0.62
COMMD1-203ENST00000444166 LXNQ9BS40 222 aa11.18□□□□□ -0.62
COMMD1-203ENST00000444166 RNF26Q9BY78 433 aaPredicted RBP11.18□□□□□ -0.62
COMMD1-203ENST00000444166 CXCL16Q9H2A7 254 aa11.18□□□□□ -0.62
COMMD1-203ENST00000444166 PARP2Q9UGN5 583 aa11.18□□□□□ -0.62
COMMD1-203ENST00000444166 BACE2Q9Y5Z0 518 aa11.18□□□□□ -0.62
COMMD1-203ENST00000444166 CDY1Q9Y6F8 540 aa11.18□□□□□ -0.62
COMMD1-203ENST00000444166 FREM2Q5SZK8 3169 aa11.17□□□□□ -0.62
COMMD1-203ENST00000444166 IGSF10Q6WRI0 2623 aa11.17□□□□□ -0.62
COMMD1-203ENST00000444166 CACNA1EQ15878 2313 aa11.17□□□□□ -0.62
COMMD1-203ENST00000444166 TMEM189-UBE2V1I3L0A0 370 aa11.17□□□□□ -0.62
COMMD1-203ENST00000444166 ZBTB39O15060 712 aa11.17□□□□□ -0.62
COMMD1-203ENST00000444166 SLC37A4O43826 429 aa11.17□□□□□ -0.62
COMMD1-203ENST00000444166 EPN2O95208 641 aa11.17□□□□□ -0.62
COMMD1-203ENST00000444166 PTPN2P17706 415 aa11.17□□□□□ -0.62
COMMD1-203ENST00000444166 PSMC3P17980 439 aa11.17□□□□□ -0.62
COMMD1-203ENST00000444166 CCNE1P24864 410 aa11.17□□□□□ -0.62
COMMD1-203ENST00000444166 GDI1P31150 447 aa11.17□□□□□ -0.62
COMMD1-203ENST00000444166 HOXC13P31276 330 aa11.17□□□□□ -0.62
COMMD1-203ENST00000444166 RAP1GAPP47736 663 aa11.17□□□□□ -0.62
COMMD1-203ENST00000444166 TFDP1Q14186 410 aa11.17□□□□□ -0.62
COMMD1-203ENST00000444166 NPY5RQ15761 445 aa11.17□□□□□ -0.62
COMMD1-203ENST00000444166 PLA2G2CQ5R387 149 aa11.17□□□□□ -0.62
COMMD1-203ENST00000444166 RNF20Q5VTR2 975 aa11.17□□□□□ -0.62
COMMD1-203ENST00000444166 HEATR6Q6AI08 1181 aaKnown RBP11.17□□□□□ -0.62
COMMD1-203ENST00000444166 CD300LGQ6UXG3 332 aa11.17□□□□□ -0.62
COMMD1-203ENST00000444166 Q6ZS52 159 aa11.17□□□□□ -0.62
COMMD1-203ENST00000444166 WDR5BQ86VZ2 330 aa11.17□□□□□ -0.62
COMMD1-203ENST00000444166 C12orf50Q8NA57 414 aaPredicted RBP11.17□□□□□ -0.62
COMMD1-203ENST00000444166 DEPDC1BQ8WUY9 529 aa11.17□□□□□ -0.62
COMMD1-203ENST00000444166 SMARCD2Q92925 531 aa11.17□□□□□ -0.62
COMMD1-203ENST00000444166 ZSWIM3Q96MP5 696 aa11.17□□□□□ -0.62
COMMD1-203ENST00000444166 MTRQ99707 1265 aa11.17□□□□□ -0.62
COMMD1-203ENST00000444166 C22orf23Q9BZE7 217 aa11.17□□□□□ -0.62
COMMD1-203ENST00000444166 ARRDC1-AS1Q9H2J1 176 aa11.17□□□□□ -0.62
COMMD1-203ENST00000444166 TRPV4Q9HBA0 871 aa11.17□□□□□ -0.62
COMMD1-203ENST00000444166 KCNMB3Q9NPA1 279 aa11.17□□□□□ -0.62
COMMD1-203ENST00000444166 ANO2Q9NQ90 1003 aa11.17□□□□□ -0.62
COMMD1-203ENST00000444166 SH3GLB2Q9NR46 395 aa11.17□□□□□ -0.62
COMMD1-203ENST00000444166 RBM12Q9NTZ6 932 aaKnown RBP11.17□□□□□ -0.62
COMMD1-203ENST00000444166 DDX25Q9UHL0 483 aaKnown RBP11.17□□□□□ -0.62
COMMD1-203ENST00000444166 ASH1LQ9NR48 2969 aaKnown RBP11.16□□□□□ -0.62
COMMD1-203ENST00000444166 WDFY3Q8IZQ1 3526 aa11.16□□□□□ -0.62
COMMD1-203ENST00000444166 MOSPD3O75425 235 aa11.16□□□□□ -0.62
COMMD1-203ENST00000444166 ABLIM3O94929 683 aa11.16□□□□□ -0.62
COMMD1-203ENST00000444166 THP07101 528 aa11.16□□□□□ -0.62
COMMD1-203ENST00000444166 ARL2P36404 184 aa11.16□□□□□ -0.62
COMMD1-203ENST00000444166 VIPR2P41587 438 aa11.16□□□□□ -0.62
COMMD1-203ENST00000444166 LRRC32Q14392 662 aa11.16□□□□□ -0.62
COMMD1-203ENST00000444166 CCDC6Q16204 474 aa11.16□□□□□ -0.62
COMMD1-203ENST00000444166 XKR9Q5GH70 373 aa11.16□□□□□ -0.62
COMMD1-203ENST00000444166 SLC8B1Q6J4K2 584 aa11.16□□□□□ -0.62
COMMD1-203ENST00000444166 CEP68Q76N32 757 aa11.16□□□□□ -0.62
COMMD1-203ENST00000444166 OTUD6AQ7L8S5 288 aa11.16□□□□□ -0.62
COMMD1-203ENST00000444166 ZNF461Q8TAF7 563 aa11.16□□□□□ -0.62
COMMD1-203ENST00000444166 DDX27Q96GQ7 796 aaKnown RBP11.16□□□□□ -0.62
COMMD1-203ENST00000444166 MSANTD3Q96H12 275 aa11.16□□□□□ -0.62
COMMD1-203ENST00000444166 RGL1Q9NZL6 768 aa11.16□□□□□ -0.62
COMMD1-203ENST00000444166 NAP1L2Q9ULW6 460 aaPredicted RBP11.16□□□□□ -0.62
COMMD1-203ENST00000444166 PCDHA4Q9UN74 947 aa11.16□□□□□ -0.62
COMMD1-203ENST00000444166 LOC400499M0QZD8 3231 aa11.16□□□□□ -0.62
COMMD1-203ENST00000444166 SOBPA7XYQ1 873 aa11.15□□□□□ -0.62
COMMD1-203ENST00000444166 ZNF197O14709 1029 aa11.15□□□□□ -0.62
COMMD1-203ENST00000444166 ZNF263O14978 683 aa11.15□□□□□ -0.62
COMMD1-203ENST00000444166 AXIN1O15169 862 aa11.15□□□□□ -0.62
COMMD1-203ENST00000444166 RECQL4O94761 1208 aa11.15□□□□□ -0.62
COMMD1-203ENST00000444166 LRG1P02750 347 aa11.15□□□□□ -0.62
COMMD1-203ENST00000444166 IFNAR1P17181 557 aa11.15□□□□□ -0.62
COMMD1-203ENST00000444166 GLRA2P23416 452 aa11.15□□□□□ -0.62
COMMD1-203ENST00000444166 TKTP29401 623 aaKnown RBP11.15□□□□□ -0.62
COMMD1-203ENST00000444166 RBM25P49756 843 aaKnown RBP11.15□□□□□ -0.62
COMMD1-203ENST00000444166 NLRP5P59047 1200 aa11.15□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 55.9 ms