RNA–Protein interactions for RNA: ENST00000443891.5

CTDSP1-204, Transcript of CTD small phosphatase 1, humanhuman

TSL 3 BASIC

Gene CTDSP1, Length 1,109 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDSP1-204ENST00000443891 MAPK7Q13164 816 aa17.89■□□□□ 0.45
CTDSP1-204ENST00000443891 MPZL3Q6UWV2 235 aa17.89■□□□□ 0.45
CTDSP1-204ENST00000443891 MTSS1LQ765P7 747 aa17.89■□□□□ 0.45
CTDSP1-204ENST00000443891 SIX5Q8N196 739 aa17.89■□□□□ 0.45
CTDSP1-204ENST00000443891 SYT2Q8N9I0 419 aaPredicted RBP17.89■□□□□ 0.45
CTDSP1-204ENST00000443891 FLCNQ8NFG4 579 aa17.89■□□□□ 0.45
CTDSP1-204ENST00000443891 AK8Q96MA6 479 aa17.89■□□□□ 0.45
CTDSP1-204ENST00000443891 ACAP3Q96P50 834 aa17.89■□□□□ 0.45
CTDSP1-204ENST00000443891 PHOX2BQ99453 314 aa17.89■□□□□ 0.45
CTDSP1-204ENST00000443891 MMTAG2Q9BU76 263 aaKnown RBP17.89■□□□□ 0.45
CTDSP1-204ENST00000443891 UPF2Q9HAU5 1272 aaKnown RBP17.89■□□□□ 0.45
CTDSP1-204ENST00000443891 SLC2A4RGQ9NR83 387 aa17.89■□□□□ 0.45
CTDSP1-204ENST00000443891 CACNG4Q9UBN1 327 aa17.89■□□□□ 0.45
CTDSP1-204ENST00000443891 KCNH3Q9ULD8 1083 aa17.89■□□□□ 0.45
CTDSP1-204ENST00000443891 USP20Q9Y2K6 914 aa17.89■□□□□ 0.45
CTDSP1-204ENST00000443891 SYN3O14994 580 aa17.88■□□□□ 0.45
CTDSP1-204ENST00000443891 TOM1L1O75674 476 aa17.88■□□□□ 0.45
CTDSP1-204ENST00000443891 PLS3P13797 630 aa17.88■□□□□ 0.45
CTDSP1-204ENST00000443891 OR1D2P34982 312 aa17.88■□□□□ 0.45
CTDSP1-204ENST00000443891 HTR4Q13639 388 aa17.88■□□□□ 0.45
CTDSP1-204ENST00000443891 IL17AQ16552 155 aa17.88■□□□□ 0.45
CTDSP1-204ENST00000443891 MCTP1Q6DN14 999 aa17.88■□□□□ 0.45
CTDSP1-204ENST00000443891 PHLDB3Q6NSJ2 640 aa17.88■□□□□ 0.45
CTDSP1-204ENST00000443891 ZPBP2Q6X784 338 aa17.88■□□□□ 0.45
CTDSP1-204ENST00000443891 GET4Q7L5D6 327 aaPredicted RBP17.88■□□□□ 0.45
CTDSP1-204ENST00000443891 CCDC105Q8IYK2 499 aa17.88■□□□□ 0.45
CTDSP1-204ENST00000443891 TCHPQ9BT92 498 aa17.88■□□□□ 0.45
CTDSP1-204ENST00000443891 RUSC1Q9BVN2 902 aa17.88■□□□□ 0.45
CTDSP1-204ENST00000443891 TARS2Q9BW92 718 aaKnown RBP17.88■□□□□ 0.45
CTDSP1-204ENST00000443891 POLD4Q9HCU8 107 aa17.88■□□□□ 0.45
CTDSP1-204ENST00000443891 CNTN3Q9P232 1028 aa17.88■□□□□ 0.45
CTDSP1-204ENST00000443891 CDH7Q9ULB5 785 aa17.88■□□□□ 0.45
CTDSP1-204ENST00000443891 H3BQV1 296 aa17.87■□□□□ 0.45
CTDSP1-204ENST00000443891 GFRA3O60609 400 aa17.87■□□□□ 0.45
CTDSP1-204ENST00000443891 BMP15O95972 392 aa17.87■□□□□ 0.45
CTDSP1-204ENST00000443891 MYBP10242 640 aa17.87■□□□□ 0.45
CTDSP1-204ENST00000443891 GLRA4Q5JXX5 417 aa17.87■□□□□ 0.45
CTDSP1-204ENST00000443891 AXDND1Q5T1B0 1012 aaPredicted RBP17.87■□□□□ 0.45
CTDSP1-204ENST00000443891 SLC8B1Q6J4K2 584 aa17.87■□□□□ 0.45
CTDSP1-204ENST00000443891 CD300LGQ6UXG3 332 aa17.87■□□□□ 0.45
CTDSP1-204ENST00000443891 TAS1R3Q7RTX0 852 aa17.87■□□□□ 0.45
CTDSP1-204ENST00000443891 GRASPQ7Z6J2 395 aaPredicted RBP17.87■□□□□ 0.45
CTDSP1-204ENST00000443891 CDK5RAP3Q96JB5 506 aa17.87■□□□□ 0.45
CTDSP1-204ENST00000443891 TMX3Q96JJ7 454 aa17.87■□□□□ 0.45
CTDSP1-204ENST00000443891 SNX27Q96L92 541 aa17.87■□□□□ 0.45
CTDSP1-204ENST00000443891 CXCL16Q9H2A7 254 aa17.87■□□□□ 0.45
CTDSP1-204ENST00000443891 AVENQ9NQS1 362 aaPredicted RBP17.87■□□□□ 0.45
CTDSP1-204ENST00000443891 LARSQ9P2J5 1176 aaKnown RBP17.87■□□□□ 0.45
CTDSP1-204ENST00000443891 MAFFQ9ULX9 164 aa17.87■□□□□ 0.45
CTDSP1-204ENST00000443891 PP2D1A8MPX8 630 aa17.86■□□□□ 0.45
CTDSP1-204ENST00000443891 H7C4K7 107 aa17.86■□□□□ 0.45
CTDSP1-204ENST00000443891 ABLIM1O14639 778 aa17.86■□□□□ 0.45
CTDSP1-204ENST00000443891 CDC25AP30304 524 aa17.86■□□□□ 0.45
CTDSP1-204ENST00000443891 ABCD1P33897 745 aa17.86■□□□□ 0.45
CTDSP1-204ENST00000443891 KYAT1Q16773 422 aa17.86■□□□□ 0.45
CTDSP1-204ENST00000443891 KCNK18Q7Z418 384 aa17.86■□□□□ 0.45
CTDSP1-204ENST00000443891 TMEM161BQ8NDZ6 487 aa17.86■□□□□ 0.45
CTDSP1-204ENST00000443891 ZNF461Q8TAF7 563 aa17.86■□□□□ 0.45
CTDSP1-204ENST00000443891 SLC7A14Q8TBB6 771 aa17.86■□□□□ 0.45
CTDSP1-204ENST00000443891 RSAD2Q8WXG1 361 aa17.86■□□□□ 0.45
CTDSP1-204ENST00000443891 SHDQ96IW2 340 aa17.86■□□□□ 0.45
CTDSP1-204ENST00000443891 TSPAN18Q96SJ8 248 aa17.86■□□□□ 0.45
CTDSP1-204ENST00000443891 PLEKHA5Q9HAU0 1116 aa17.86■□□□□ 0.45
CTDSP1-204ENST00000443891 ODF2LQ9ULJ1 636 aa17.86■□□□□ 0.45
CTDSP1-204ENST00000443891 ZSCAN21Q9Y5A6 473 aaPredicted RBP17.86■□□□□ 0.45
CTDSP1-204ENST00000443891 CDY1Q9Y6F8 540 aa17.86■□□□□ 0.45
CTDSP1-204ENST00000443891 PODXLO00592 558 aa17.85■□□□□ 0.45
CTDSP1-204ENST00000443891 SLC16A4O15374 487 aa17.85■□□□□ 0.45
CTDSP1-204ENST00000443891 ADAM12O43184 909 aa17.85■□□□□ 0.45
CTDSP1-204ENST00000443891 NARSO43776 548 aaKnown RBP17.85■□□□□ 0.45
CTDSP1-204ENST00000443891 CFHP08603 1231 aa17.85■□□□□ 0.45
CTDSP1-204ENST00000443891 RFX1P22670 979 aa17.85■□□□□ 0.45
CTDSP1-204ENST00000443891 TKTP29401 623 aaKnown RBP17.85■□□□□ 0.45
CTDSP1-204ENST00000443891 SLC12A3P55017 1021 aa17.85■□□□□ 0.45
CTDSP1-204ENST00000443891 CEP120Q8N960 986 aa17.85■□□□□ 0.45
CTDSP1-204ENST00000443891 DTWD2Q8NBA8 298 aa17.85■□□□□ 0.45
CTDSP1-204ENST00000443891 FAM86C1Q9NVL1 165 aa17.85■□□□□ 0.45
CTDSP1-204ENST00000443891 NUMBLQ9Y6R0 609 aa17.85■□□□□ 0.45
CTDSP1-204ENST00000443891 ARHGEF37A1IGU5 675 aa17.84■□□□□ 0.45
CTDSP1-204ENST00000443891 KRBA1A5PL33 1030 aa17.84■□□□□ 0.45
CTDSP1-204ENST00000443891 VWA3AA6NCI4 1184 aa17.84■□□□□ 0.45
CTDSP1-204ENST00000443891 CLDN3O15551 220 aa17.84■□□□□ 0.45
CTDSP1-204ENST00000443891 ABLIM3O94929 683 aa17.84■□□□□ 0.45
CTDSP1-204ENST00000443891 MAPTP10636 758 aaKnown RBP17.84■□□□□ 0.45
CTDSP1-204ENST00000443891 GJB2P29033 226 aa17.84■□□□□ 0.45
CTDSP1-204ENST00000443891 ELF1P32519 619 aa17.84■□□□□ 0.45
CTDSP1-204ENST00000443891 PFKPQ01813 784 aa17.84■□□□□ 0.45
CTDSP1-204ENST00000443891 SOX4Q06945 474 aaPredicted RBP17.84■□□□□ 0.45
CTDSP1-204ENST00000443891 MCL1Q07820 350 aa17.84■□□□□ 0.45
CTDSP1-204ENST00000443891 MRPL58Q14197 206 aaKnown RBP17.84■□□□□ 0.45
CTDSP1-204ENST00000443891 NOLC1Q14978 699 aaKnown RBP eCLIP17.84■□□□□ 0.45
CTDSP1-204ENST00000443891 TMEM119Q4V9L6 283 aa17.84■□□□□ 0.45
CTDSP1-204ENST00000443891 PABPC1LQ4VXU2 614 aaKnown RBP17.84■□□□□ 0.45
CTDSP1-204ENST00000443891 TPGS2Q68CL5 300 aa17.84■□□□□ 0.45
CTDSP1-204ENST00000443891 C3orf58Q8NDZ4 430 aa17.84■□□□□ 0.45
CTDSP1-204ENST00000443891 APPL2Q8NEU8 664 aa17.84■□□□□ 0.45
CTDSP1-204ENST00000443891 FGF13Q92913 245 aa17.84■□□□□ 0.45
CTDSP1-204ENST00000443891 PNMA5Q96PV4 448 aa17.84■□□□□ 0.45
CTDSP1-204ENST00000443891 OXCT2Q9BYC2 517 aaPredicted RBP17.84■□□□□ 0.45
CTDSP1-204ENST00000443891 SEMA4AQ9H3S1 761 aa17.84■□□□□ 0.45
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms