RNA–Protein interactions for RNA: ENST00000443816.5

FN1-211, Transcript of fibronectin 1, humanhuman

TSL 1 (best) BASIC

Gene FN1, Length 7,762 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FN1-211ENST00000443816 DEUP1Q05D60 604 aa11.85□□□□□ -0.51
FN1-211ENST00000443816 ANKRD40Q6AI12 368 aa11.85□□□□□ -0.51
FN1-211ENST00000443816 ARMC6Q6NXE6 501 aa11.85□□□□□ -0.51
FN1-211ENST00000443816 RGL1Q9NZL6 768 aa11.85□□□□□ -0.51
FN1-211ENST00000443816 IPPQ9Y573 584 aa11.85□□□□□ -0.51
FN1-211ENST00000443816 PCDHB12Q9Y5F1 795 aa11.85□□□□□ -0.51
FN1-211ENST00000443816 MROH2AA6NES4 1674 aa11.85□□□□□ -0.51
FN1-211ENST00000443816 IRF1P10914 325 aa11.85□□□□□ -0.51
FN1-211ENST00000443816 UCMAQ8WVF2 138 aa11.85□□□□□ -0.51
FN1-211ENST00000443816 MYH7P12883 1935 aa11.85□□□□□ -0.51
FN1-211ENST00000443816 GOLGA8MH3BSY2 632 aa11.85□□□□□ -0.51
FN1-211ENST00000443816 FOXP2O15409 715 aa11.85□□□□□ -0.51
FN1-211ENST00000443816 NR3C2P08235 984 aa11.85□□□□□ -0.51
FN1-211ENST00000443816 ALDH8A1Q9H2A2 487 aaPredicted RBP11.85□□□□□ -0.51
FN1-211ENST00000443816 UNC45AQ9H3U1 944 aa11.85□□□□□ -0.51
FN1-211ENST00000443816 RRAGCQ9HB90 399 aa11.85□□□□□ -0.51
FN1-211ENST00000443816 SPECC1L-ADORA2AF8WAN1 911 aa11.85□□□□□ -0.51
FN1-211ENST00000443816 TLR2O60603 784 aa11.85□□□□□ -0.51
FN1-211ENST00000443816 HADHAP40939 763 aa11.85□□□□□ -0.51
FN1-211ENST00000443816 MORF4L2Q15014 288 aa11.85□□□□□ -0.51
FN1-211ENST00000443816 SLFNL1Q499Z3 407 aa11.85□□□□□ -0.51
FN1-211ENST00000443816 FBXO33Q7Z6M2 555 aa11.85□□□□□ -0.51
FN1-211ENST00000443816 STN1Q9H668 368 aaKnown RBP11.85□□□□□ -0.51
FN1-211ENST00000443816 SENP1Q9P0U3 644 aa11.85□□□□□ -0.51
FN1-211ENST00000443816 NRXN1Q9ULB1 1477 aa11.85□□□□□ -0.51
FN1-211ENST00000443816 EIF3DO15371 548 aaKnown RBP eCLIP11.85□□□□□ -0.51
FN1-211ENST00000443816 AKT1P31749 480 aa11.85□□□□□ -0.51
FN1-211ENST00000443816 SAMD3Q8N6K7 520 aa11.85□□□□□ -0.51
FN1-211ENST00000443816 C17orf75Q9HAS0 396 aa11.85□□□□□ -0.51
FN1-211ENST00000443816 SLC25A13Q9UJS0 675 aa11.85□□□□□ -0.51
FN1-211ENST00000443816 PACSIN2Q9UNF0 486 aaPredicted RBP11.85□□□□□ -0.51
FN1-211ENST00000443816 IFT172Q9UG01 1749 aa11.85□□□□□ -0.51
FN1-211ENST00000443816 PTPRUQ92729 1446 aa11.85□□□□□ -0.51
FN1-211ENST00000443816 ICAM1P05362 532 aa11.84□□□□□ -0.51
FN1-211ENST00000443816 PPP4R4Q6NUP7 873 aa11.84□□□□□ -0.51
FN1-211ENST00000443816 ANKEF1Q9NU02 776 aa11.84□□□□□ -0.51
FN1-211ENST00000443816 NKRFO15226 690 aaKnown RBP eCLIP11.84□□□□□ -0.512e-17■□□□□ 8.6
FN1-211ENST00000443816 DCTN3O75935 186 aa11.84□□□□□ -0.51
FN1-211ENST00000443816 MUTP22033 750 aa11.84□□□□□ -0.51
FN1-211ENST00000443816 EPM2AIP1Q7L775 607 aaPredicted RBP11.84□□□□□ -0.51
FN1-211ENST00000443816 HINFPQ9BQA5 517 aa11.84□□□□□ -0.51
FN1-211ENST00000443816 KRT82Q9NSB4 513 aa11.84□□□□□ -0.51
FN1-211ENST00000443816 A0A087WUV0 522 aaPredicted RBP11.84□□□□□ -0.51
FN1-211ENST00000443816 ACOT2P49753 483 aa11.84□□□□□ -0.51
FN1-211ENST00000443816 P3H1Q32P28 736 aa11.84□□□□□ -0.51
FN1-211ENST00000443816 HSP90AA5PQ58FG0 334 aa11.84□□□□□ -0.51
FN1-211ENST00000443816 ZDHHC15Q96MV8 337 aa11.84□□□□□ -0.51
FN1-211ENST00000443816 DSEQ9UL01 958 aa11.84□□□□□ -0.51
FN1-211ENST00000443816 C2CD2LO14523 706 aa11.84□□□□□ -0.51
FN1-211ENST00000443816 PDGFRBP09619 1106 aa11.84□□□□□ -0.51
FN1-211ENST00000443816 FAM200BP0CF97 657 aa11.84□□□□□ -0.51
FN1-211ENST00000443816 TMPRSS15P98073 1019 aa11.84□□□□□ -0.51
FN1-211ENST00000443816 PRAMEF18Q5VWM3 479 aa11.84□□□□□ -0.51
FN1-211ENST00000443816 APOBEC2Q9Y235 224 aaKnown RBP11.84□□□□□ -0.51
FN1-211ENST00000443816 RNASEH1O60930 286 aaKnown RBP11.84□□□□□ -0.51
FN1-211ENST00000443816 EGFRP00533 1210 aa11.84□□□□□ -0.51
FN1-211ENST00000443816 VCPP55072 806 aaKnown RBP11.84□□□□□ -0.51
FN1-211ENST00000443816 BACE1P56817 501 aa11.84□□□□□ -0.51
FN1-211ENST00000443816 ITPK1Q13572 414 aa11.84□□□□□ -0.51
FN1-211ENST00000443816 LBRQ14739 615 aaKnown RBP11.84□□□□□ -0.51
FN1-211ENST00000443816 ZKSCAN8Q15776 578 aaPredicted RBP11.84□□□□□ -0.51
FN1-211ENST00000443816 AIPL1Q9NZN9 384 aa11.84□□□□□ -0.51
FN1-211ENST00000443816 C3orf70A6NLC5 250 aaPredicted RBP11.84□□□□□ -0.51
FN1-211ENST00000443816 TRIM68Q6AZZ1 485 aa11.84□□□□□ -0.51
FN1-211ENST00000443816 OXER1Q8TDS5 423 aa11.84□□□□□ -0.51
FN1-211ENST00000443816 RIT2Q99578 217 aa11.84□□□□□ -0.51
FN1-211ENST00000443816 HEMGNQ9BXL5 484 aa11.84□□□□□ -0.51
FN1-211ENST00000443816 CCSER1Q9C0I3 900 aa11.84□□□□□ -0.51
FN1-211ENST00000443816 KIF17Q9P2E2 1029 aa11.84□□□□□ -0.51
FN1-211ENST00000443816 PPP1R9AQ9ULJ8 1098 aa11.84□□□□□ -0.51
FN1-211ENST00000443816 EXTL3O43909 919 aa11.84□□□□□ -0.51
FN1-211ENST00000443816 EFCAB14O75071 495 aa11.84□□□□□ -0.51
FN1-211ENST00000443816 CSF1RP07333 972 aa11.84□□□□□ -0.51
FN1-211ENST00000443816 SLC2A3P11169 496 aa11.84□□□□□ -0.51
FN1-211ENST00000443816 SNRNP35Q16560 246 aaKnown RBP11.84□□□□□ -0.51
FN1-211ENST00000443816 ATG9AQ7Z3C6 839 aa11.84□□□□□ -0.51
FN1-211ENST00000443816 SLC26A7Q8TE54 656 aa11.84□□□□□ -0.51
FN1-211ENST00000443816 TRIM55Q9BYV6 548 aa11.84□□□□□ -0.51
FN1-211ENST00000443816 CAPN7Q9Y6W3 813 aa11.84□□□□□ -0.51
FN1-211ENST00000443816 SLC7A5Q01650 507 aa11.83□□□□□ -0.52
FN1-211ENST00000443816 TWF1Q12792 350 aa11.83□□□□□ -0.52
FN1-211ENST00000443816 ZNF484Q5JVG2 852 aa11.83□□□□□ -0.52
FN1-211ENST00000443816 RCOR2Q8IZ40 523 aa11.83□□□□□ -0.52
FN1-211ENST00000443816 TSPAN17Q96FV3 270 aa11.83□□□□□ -0.52
FN1-211ENST00000443816 DNAJC17Q9NVM6 304 aaKnown RBP11.83□□□□□ -0.52
FN1-211ENST00000443816 LRRC53A6NM62 1247 aa11.83□□□□□ -0.52
FN1-211ENST00000443816 NTSR2O95665 410 aa11.83□□□□□ -0.52
FN1-211ENST00000443816 SYF2O95926 243 aaKnown RBP11.83□□□□□ -0.52
FN1-211ENST00000443816 GFPT1Q06210 699 aaPredicted RBP11.83□□□□□ -0.52
FN1-211ENST00000443816 RNF135Q8IUD6 432 aa11.83□□□□□ -0.52
FN1-211ENST00000443816 OPTNQ96CV9 577 aa11.83□□□□□ -0.52
FN1-211ENST00000443816 CFAP69A5D8W1 941 aa11.83□□□□□ -0.52
FN1-211ENST00000443816 CARNS1A5YM72 827 aa11.83□□□□□ -0.52
FN1-211ENST00000443816 ATP8B1O43520 1251 aa11.83□□□□□ -0.52
FN1-211ENST00000443816 GNL1P36915 607 aaPredicted RBP11.83□□□□□ -0.52
FN1-211ENST00000443816 SLCO1A2P46721 670 aa11.83□□□□□ -0.52
FN1-211ENST00000443816 PID1Q7Z2X4 250 aa11.83□□□□□ -0.52
FN1-211ENST00000443816 PDE11AQ9HCR9 933 aa11.83□□□□□ -0.52
FN1-211ENST00000443816 HIST1H2AGP0C0S8 130 aaPredicted RBP11.83□□□□□ -0.52
FN1-211ENST00000443816 HIST1H2ADP20671 130 aa11.83□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms