RNA–Protein interactions for RNA: ENST00000443780.5

UBE2D4-205, Transcript of ubiquitin conjugating enzyme E2 D4 (putative), humanhuman

TSL 3

Gene UBE2D4, Length 743 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D4-205ENST00000443780 SP100P23497 879 aaPredicted RBP22.3■■□□□ 1.16
UBE2D4-205ENST00000443780 IGFBP6P24592 240 aaPredicted RBP22.3■■□□□ 1.16
UBE2D4-205ENST00000443780 STK38Q15208 465 aa22.3■■□□□ 1.16
UBE2D4-205ENST00000443780 SEZ6Q53EL9 994 aa22.3■■□□□ 1.16
UBE2D4-205ENST00000443780 PALB2Q86YC2 1186 aa22.3■■□□□ 1.16
UBE2D4-205ENST00000443780 GLYCTKQ8IVS8 523 aa22.3■■□□□ 1.16
UBE2D4-205ENST00000443780 PIK3R5Q8WYR1 880 aa22.3■■□□□ 1.16
UBE2D4-205ENST00000443780 FIZ1Q96SL8 496 aa22.3■■□□□ 1.16
UBE2D4-205ENST00000443780 HAPLN2Q9GZV7 340 aa22.3■■□□□ 1.16
UBE2D4-205ENST00000443780 CNTN3Q9P232 1028 aa22.3■■□□□ 1.16
UBE2D4-205ENST00000443780 PIGRP01833 764 aa22.29■■□□□ 1.16
UBE2D4-205ENST00000443780 SPATA31D3P0C874 917 aa22.29■■□□□ 1.16
UBE2D4-205ENST00000443780 PDIA4P13667 645 aaKnown RBP22.29■■□□□ 1.16
UBE2D4-205ENST00000443780 MATR3P43243 847 aaKnown RBP eCLIP22.29■■□□□ 1.16
UBE2D4-205ENST00000443780 SLC10A6Q3KNW5 377 aa22.29■■□□□ 1.16
UBE2D4-205ENST00000443780 LILRA6Q6PI73 481 aa22.29■■□□□ 1.16
UBE2D4-205ENST00000443780 ELMSAN1Q6PJG2 1045 aa22.29■■□□□ 1.16
UBE2D4-205ENST00000443780 CD300LGQ6UXG3 332 aa22.29■■□□□ 1.16
UBE2D4-205ENST00000443780 SPATA31D4Q6ZUB0 917 aa22.29■■□□□ 1.16
UBE2D4-205ENST00000443780 CEP57Q86XR8 500 aa22.29■■□□□ 1.16
UBE2D4-205ENST00000443780 LINC00301Q8NCQ3 95 aa22.29■■□□□ 1.16
UBE2D4-205ENST00000443780 CMASQ8NFW8 434 aaPredicted RBP22.29■■□□□ 1.16
UBE2D4-205ENST00000443780 LNX1Q8TBB1 728 aaPredicted RBP22.29■■□□□ 1.16
UBE2D4-205ENST00000443780 HDAC7Q8WUI4 952 aa22.29■■□□□ 1.16
UBE2D4-205ENST00000443780 DDX27Q96GQ7 796 aaKnown RBP22.29■■□□□ 1.16
UBE2D4-205ENST00000443780 ZNF396Q96N95 335 aaPredicted RBP22.29■■□□□ 1.16
UBE2D4-205ENST00000443780 TSHZ2Q9NRE2 1034 aa22.29■■□□□ 1.16
UBE2D4-205ENST00000443780 TFIP11Q9UBB9 837 aaKnown RBP22.29■■□□□ 1.16
UBE2D4-205ENST00000443780 DOCK8Q8NF50 2099 aa22.29■■□□□ 1.16
UBE2D4-205ENST00000443780 PRR33A8MZF0 331 aa22.28■■□□□ 1.16
UBE2D4-205ENST00000443780 HNRNPDLO14979 420 aaKnown RBP22.28■■□□□ 1.16
UBE2D4-205ENST00000443780 TGM5O43548 720 aa22.28■■□□□ 1.16
UBE2D4-205ENST00000443780 MYBP10242 640 aa22.28■■□□□ 1.16
UBE2D4-205ENST00000443780 NMT1P30419 496 aaKnown RBP22.28■■□□□ 1.16
UBE2D4-205ENST00000443780 LIG4P49917 911 aa22.28■■□□□ 1.16
UBE2D4-205ENST00000443780 GTF2BQ00403 316 aa22.28■■□□□ 1.16
UBE2D4-205ENST00000443780 PSMD5Q16401 504 aa22.28■■□□□ 1.16
UBE2D4-205ENST00000443780 PDZRN4Q6ZMN7 1036 aaPredicted RBP22.28■■□□□ 1.16
UBE2D4-205ENST00000443780 C15orf39Q6ZRI6 1047 aa22.28■■□□□ 1.16
UBE2D4-205ENST00000443780 CCDC73Q6ZRK6 1079 aa22.28■■□□□ 1.16
UBE2D4-205ENST00000443780 SV2BQ7L1I2 683 aa22.28■■□□□ 1.16
UBE2D4-205ENST00000443780 DYMQ7RTS9 669 aa22.28■■□□□ 1.16
UBE2D4-205ENST00000443780 C3orf58Q8NDZ4 430 aa22.28■■□□□ 1.16
UBE2D4-205ENST00000443780 CLSTN3Q9BQT9 956 aa22.28■■□□□ 1.16
UBE2D4-205ENST00000443780 PANK2Q9BZ23 570 aa22.28■■□□□ 1.16
UBE2D4-205ENST00000443780 PLEKHA4Q9H4M7 779 aa22.28■■□□□ 1.16
UBE2D4-205ENST00000443780 C2CD4DB7Z1M9 353 aa22.27■■□□□ 1.16
UBE2D4-205ENST00000443780 CLTAP09496 248 aa22.27■■□□□ 1.16
UBE2D4-205ENST00000443780 FGFR3P22607 806 aa22.27■■□□□ 1.16
UBE2D4-205ENST00000443780 ABCD1P33897 745 aa22.27■■□□□ 1.16
UBE2D4-205ENST00000443780 FOXD4L5Q5VV16 416 aaPredicted RBP22.27■■□□□ 1.16
UBE2D4-205ENST00000443780 PDXDC1Q6P996 788 aa22.27■■□□□ 1.16
UBE2D4-205ENST00000443780 FOXD4L4Q8WXT5 416 aaPredicted RBP22.27■■□□□ 1.16
UBE2D4-205ENST00000443780 DDX12PQ92771 950 aa22.27■■□□□ 1.16
UBE2D4-205ENST00000443780 EDAQ92838 391 aa22.27■■□□□ 1.16
UBE2D4-205ENST00000443780 C18orf25Q96B23 403 aaPredicted RBP22.27■■□□□ 1.16
UBE2D4-205ENST00000443780 RAPGEFL1Q9UHV5 662 aa22.27■■□□□ 1.16
UBE2D4-205ENST00000443780 A0A087X0B3 334 aa22.26■■□□□ 1.15
UBE2D4-205ENST00000443780 CCDC195A0A1B0GUA6 201 aa22.26■■□□□ 1.15
UBE2D4-205ENST00000443780 MYMKA6NI61 221 aa22.26■■□□□ 1.15
UBE2D4-205ENST00000443780 PODXLO00592 558 aa22.26■■□□□ 1.15
UBE2D4-205ENST00000443780 SPTLC2O15270 562 aa22.26■■□□□ 1.15
UBE2D4-205ENST00000443780 TRAPPC3O43617 180 aa22.26■■□□□ 1.15
UBE2D4-205ENST00000443780 RFPL2O75678 378 aa22.26■■□□□ 1.15
UBE2D4-205ENST00000443780 ZSCAN22P10073 491 aaPredicted RBP22.26■■□□□ 1.15
UBE2D4-205ENST00000443780 CXCL8P10145 99 aa22.26■■□□□ 1.15
UBE2D4-205ENST00000443780 RPL9P32969 192 aaKnown RBP22.26■■□□□ 1.15
UBE2D4-205ENST00000443780 STAT6P42226 847 aa22.26■■□□□ 1.15
UBE2D4-205ENST00000443780 ZC2HC1CQ53FD0 456 aaPredicted RBP22.26■■□□□ 1.15
UBE2D4-205ENST00000443780 MAP4K3Q8IVH8 894 aa22.26■■□□□ 1.15
UBE2D4-205ENST00000443780 DNAJC19Q96DA6 116 aa22.26■■□□□ 1.15
UBE2D4-205ENST00000443780 ST6GALNAC4Q9H4F1 302 aa22.26■■□□□ 1.15
UBE2D4-205ENST00000443780 PLEKHA5Q9HAU0 1116 aa22.26■■□□□ 1.15
UBE2D4-205ENST00000443780 USTQ9Y2C2 406 aa22.26■■□□□ 1.15
UBE2D4-205ENST00000443780 TTC26A0AVF1 554 aa22.25■■□□□ 1.15
UBE2D4-205ENST00000443780 I3L4J1 428 aa22.25■■□□□ 1.15
UBE2D4-205ENST00000443780 PPP6R2O75170 966 aa22.25■■□□□ 1.15
UBE2D4-205ENST00000443780 TNFSF9P41273 254 aa22.25■■□□□ 1.15
UBE2D4-205ENST00000443780 BRCC3P46736 316 aa22.25■■□□□ 1.15
UBE2D4-205ENST00000443780 ZXDAP98168 799 aa22.25■■□□□ 1.15
UBE2D4-205ENST00000443780 KYAT1Q16773 422 aa22.25■■□□□ 1.15
UBE2D4-205ENST00000443780 SLC39A4Q6P5W5 647 aa22.25■■□□□ 1.15
UBE2D4-205ENST00000443780 CYP26C1Q6V0L0 522 aa22.25■■□□□ 1.15
UBE2D4-205ENST00000443780 SFR1Q86XK3 245 aa22.25■■□□□ 1.15
UBE2D4-205ENST00000443780 KREMEN2Q8NCW0 462 aa22.25■■□□□ 1.15
UBE2D4-205ENST00000443780 RHOBTB2Q9BYZ6 727 aa22.25■■□□□ 1.15
UBE2D4-205ENST00000443780 ZNF318Q5VUA4 2279 aa22.24■■□□□ 1.15
UBE2D4-205ENST00000443780 A0A0B4J269 797 aa22.24■■□□□ 1.15
UBE2D4-205ENST00000443780 OGTO15294 1046 aa22.24■■□□□ 1.15
UBE2D4-205ENST00000443780 ADAM12O43184 909 aa22.24■■□□□ 1.15
UBE2D4-205ENST00000443780 FAM189A1O60320 539 aa22.24■■□□□ 1.15
UBE2D4-205ENST00000443780 PAPLNO95428 1278 aa22.24■■□□□ 1.15
UBE2D4-205ENST00000443780 YEATS4O95619 227 aa22.24■■□□□ 1.15
UBE2D4-205ENST00000443780 F13A1P00488 732 aa22.24■■□□□ 1.15
UBE2D4-205ENST00000443780 TKTP29401 623 aaKnown RBP22.24■■□□□ 1.15
UBE2D4-205ENST00000443780 PTPN21Q16825 1174 aa22.24■■□□□ 1.15
UBE2D4-205ENST00000443780 CCDC149Q6ZUS6 474 aa22.24■■□□□ 1.15
UBE2D4-205ENST00000443780 ZNF720Q7Z2F6 126 aa22.24■■□□□ 1.15
UBE2D4-205ENST00000443780 TDRD5Q8NAT2 981 aaKnown RBP22.24■■□□□ 1.15
UBE2D4-205ENST00000443780 SPRYD3Q8NCJ5 442 aa22.24■■□□□ 1.15
Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms