RNA–Protein interactions for RNA: ENST00000443621.1

LINC00393-201, long intergenic non-protein coding RNA 393, humanhuman

TSL 3 BASIC

Gene LINC00393, Length 282 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00393-201ENST00000443621 TRMT1Q9NXH9 659 aaKnown RBP3.04□□□□□ -1.92
LINC00393-201ENST00000443621 RBAKQ9NYW8 714 aaPredicted RBP3.04□□□□□ -1.92
LINC00393-201ENST00000443621 WDR35Q9P2L0 1181 aa3.04□□□□□ -1.92
LINC00393-201ENST00000443621 ADAMTS1Q9UHI8 967 aa3.04□□□□□ -1.92
LINC00393-201ENST00000443621 TMEM59LQ9UK28 342 aa3.04□□□□□ -1.92
LINC00393-201ENST00000443621 GTF3C4Q9UKN8 822 aa3.04□□□□□ -1.92
LINC00393-201ENST00000443621 ITGA11Q9UKX5 1188 aa3.04□□□□□ -1.92
LINC00393-201ENST00000443621 RAB21Q9UL25 225 aa3.04□□□□□ -1.92
LINC00393-201ENST00000443621 STRIP2Q9ULQ0 834 aa3.04□□□□□ -1.92
LINC00393-201ENST00000443621 SNX12Q9UMY4 172 aa3.04□□□□□ -1.92
LINC00393-201ENST00000443621 FZD1Q9UP38 647 aa3.04□□□□□ -1.92
LINC00393-201ENST00000443621 SCAF8Q9UPN6 1271 aaKnown RBP3.04□□□□□ -1.92
LINC00393-201ENST00000443621 TRPC6Q9Y210 931 aa3.04□□□□□ -1.92
LINC00393-201ENST00000443621 REXO2Q9Y3B8 237 aaKnown RBP3.04□□□□□ -1.92
LINC00393-201ENST00000443621 R3HCC1Q9Y3T6 440 aaKnown RBP3.04□□□□□ -1.92
LINC00393-201ENST00000443621 HYOU1Q9Y4L1 999 aa3.04□□□□□ -1.92
LINC00393-201ENST00000443621 FHOD1Q9Y613 1164 aa3.04□□□□□ -1.92
LINC00393-201ENST00000443621 SCINQ9Y6U3 715 aa3.04□□□□□ -1.92
LINC00393-201ENST00000443621 MYH10P35580 1976 aa3.03□□□□□ -1.92
LINC00393-201ENST00000443621 ANK1P16157 1881 aa3.03□□□□□ -1.92
LINC00393-201ENST00000443621 PDCD11Q14690 1871 aaKnown RBP3.03□□□□□ -1.92
LINC00393-201ENST00000443621 CTAGE15A4D2H0 777 aa3.03□□□□□ -1.92
LINC00393-201ENST00000443621 MOXD2PA6NHM9 499 aa3.03□□□□□ -1.92
LINC00393-201ENST00000443621 A6NNZ2 444 aa3.03□□□□□ -1.92
LINC00393-201ENST00000443621 ZNF487B1APH4 448 aa3.03□□□□□ -1.92
LINC00393-201ENST00000443621 ANKRD63C9JTQ0 380 aa3.03□□□□□ -1.92
LINC00393-201ENST00000443621 FOXN3O00409 490 aaPredicted RBP3.03□□□□□ -1.92
LINC00393-201ENST00000443621 IGF2BP3O00425 579 aaKnown RBP eCLIP3.03□□□□□ -1.92
LINC00393-201ENST00000443621 DDX3XO00571 662 aaKnown RBP eCLIP3.03□□□□□ -1.927e-31■■■■■ 31.1
LINC00393-201ENST00000443621 PODXLO00592 558 aa3.03□□□□□ -1.92
LINC00393-201ENST00000443621 TNPO2O14787 897 aaKnown RBP3.03□□□□□ -1.92
LINC00393-201ENST00000443621 EPHB6O15197 1021 aa3.03□□□□□ -1.92
LINC00393-201ENST00000443621 INPPL1O15357 1258 aa3.03□□□□□ -1.92
LINC00393-201ENST00000443621 GPR32O75388 356 aa3.03□□□□□ -1.92
LINC00393-201ENST00000443621 TADA3O75528 432 aa3.03□□□□□ -1.92
LINC00393-201ENST00000443621 URI1O94763 535 aaPredicted RBP3.03□□□□□ -1.92
LINC00393-201ENST00000443621 ERLIN2O94905 339 aa3.03□□□□□ -1.92
LINC00393-201ENST00000443621 HLA-DRAP01903 254 aa3.03□□□□□ -1.92
LINC00393-201ENST00000443621 TNNC2P02585 160 aa3.03□□□□□ -1.92
LINC00393-201ENST00000443621 HMGCRP04035 888 aa3.03□□□□□ -1.92
LINC00393-201ENST00000443621 ERBB2P04626 1255 aa3.03□□□□□ -1.92
LINC00393-201ENST00000443621 CYP1A1P04798 512 aaPredicted RBP3.03□□□□□ -1.92
LINC00393-201ENST00000443621 CYP1A2P05177 515 aa3.03□□□□□ -1.92
LINC00393-201ENST00000443621 CALB1P05937 261 aa3.03□□□□□ -1.92
LINC00393-201ENST00000443621 CTAGE8P0CG41 777 aa3.03□□□□□ -1.92
LINC00393-201ENST00000443621 SETSIPP0DME0 302 aa3.03□□□□□ -1.92
LINC00393-201ENST00000443621 RARBP10826 455 aa3.03□□□□□ -1.92
LINC00393-201ENST00000443621 UNGP13051 313 aaPredicted RBP3.03□□□□□ -1.92
LINC00393-201ENST00000443621 CYBAP13498 195 aa3.03□□□□□ -1.92
LINC00393-201ENST00000443621 DARSP14868 501 aaKnown RBP3.03□□□□□ -1.92
LINC00393-201ENST00000443621 CYP11B1P15538 503 aa3.03□□□□□ -1.92
LINC00393-201ENST00000443621 H2AFXP16104 143 aaPredicted RBP3.03□□□□□ -1.92
LINC00393-201ENST00000443621 SMPD1P17405 629 aa3.03□□□□□ -1.92
LINC00393-201ENST00000443621 TAL1P17542 331 aaPredicted RBP3.03□□□□□ -1.92
LINC00393-201ENST00000443621 ATF7P17544 494 aaPredicted RBP3.03□□□□□ -1.92
LINC00393-201ENST00000443621 ACO1P21399 889 aaKnown RBP3.03□□□□□ -1.92
LINC00393-201ENST00000443621 POLR2BP30876 1174 aaKnown RBP3.03□□□□□ -1.92
LINC00393-201ENST00000443621 ADCYAP1R1P41586 468 aa3.03□□□□□ -1.92
LINC00393-201ENST00000443621 GCLMP48507 274 aa3.03□□□□□ -1.92
LINC00393-201ENST00000443621 RAB27AP51159 221 aa3.03□□□□□ -1.92
LINC00393-201ENST00000443621 CYP2J2P51589 502 aa3.03□□□□□ -1.92
LINC00393-201ENST00000443621 YARSP54577 528 aaKnown RBP3.03□□□□□ -1.92
LINC00393-201ENST00000443621 CHMP4BP1P59074 171 aa3.03□□□□□ -1.92
LINC00393-201ENST00000443621 COPS2P61201 443 aa3.03□□□□□ -1.92
LINC00393-201ENST00000443621 RBP5P82980 135 aa3.03□□□□□ -1.92
LINC00393-201ENST00000443621 LACTBP83111 547 aaPredicted RBP3.03□□□□□ -1.92
LINC00393-201ENST00000443621 PURAQ00577 322 aaKnown RBP3.03□□□□□ -1.92
LINC00393-201ENST00000443621 SP3Q02447 781 aa3.03□□□□□ -1.92
LINC00393-201ENST00000443621 CACNB1Q02641 598 aaPredicted RBP3.03□□□□□ -1.92
LINC00393-201ENST00000443621 INCA1Q0VD86 236 aa3.03□□□□□ -1.92
LINC00393-201ENST00000443621 MYO1EQ12965 1108 aa3.03□□□□□ -1.92
LINC00393-201ENST00000443621 PPFIA1Q13136 1202 aa3.03□□□□□ -1.92
LINC00393-201ENST00000443621 CBLBQ13191 982 aa3.03□□□□□ -1.92
LINC00393-201ENST00000443621 NNTQ13423 1086 aa3.03□□□□□ -1.92
LINC00393-201ENST00000443621 CUL2Q13617 745 aa3.03□□□□□ -1.92
LINC00393-201ENST00000443621 NCOA4Q13772 614 aa3.03□□□□□ -1.92
LINC00393-201ENST00000443621 MTF1Q14872 753 aa3.03□□□□□ -1.92
LINC00393-201ENST00000443621 GRIK4Q16099 956 aa3.03□□□□□ -1.92
LINC00393-201ENST00000443621 FSCN1Q16658 493 aaKnown RBP3.03□□□□□ -1.92
LINC00393-201ENST00000443621 DEFB115Q30KQ5 88 aa3.03□□□□□ -1.92
LINC00393-201ENST00000443621 TUBB8Q3ZCM7 444 aa3.03□□□□□ -1.92
LINC00393-201ENST00000443621 FAM26DQ5JW98 314 aa3.03□□□□□ -1.92
LINC00393-201ENST00000443621 MARCH8Q5T0T0 291 aa3.03□□□□□ -1.92
LINC00393-201ENST00000443621 TMCO4Q5TGY1 634 aa3.03□□□□□ -1.92
LINC00393-201ENST00000443621 WDR78Q5VTH9 848 aa3.03□□□□□ -1.92
LINC00393-201ENST00000443621 ACAD10Q6JQN1 1059 aa3.03□□□□□ -1.92
LINC00393-201ENST00000443621 ALKAL1Q6UXT8 129 aa3.03□□□□□ -1.92
LINC00393-201ENST00000443621 CEP128Q6ZU80 1094 aa3.03□□□□□ -1.92
LINC00393-201ENST00000443621 ZNF571Q7Z3V5 609 aaPredicted RBP3.03□□□□□ -1.92
LINC00393-201ENST00000443621 LIMS2Q7Z4I7 341 aa3.03□□□□□ -1.92
LINC00393-201ENST00000443621 MAATS1Q7Z4T9 603 aa3.03□□□□□ -1.92
LINC00393-201ENST00000443621 POLNQ7Z5Q5 900 aa3.03□□□□□ -1.92
LINC00393-201ENST00000443621 TLK2Q86UE8 772 aa3.03□□□□□ -1.92
LINC00393-201ENST00000443621 CTAGE6Q86UF2 777 aa3.03□□□□□ -1.92
LINC00393-201ENST00000443621 PHF13Q86YI8 300 aaPredicted RBP3.03□□□□□ -1.92
LINC00393-201ENST00000443621 RHPN2Q8IUC4 686 aa3.03□□□□□ -1.92
LINC00393-201ENST00000443621 CBWD2Q8IUF1 395 aa3.03□□□□□ -1.92
LINC00393-201ENST00000443621 CREG2Q8IUH2 290 aa3.03□□□□□ -1.92
LINC00393-201ENST00000443621 FBXO16Q8IX29 292 aaPredicted RBP3.03□□□□□ -1.92
LINC00393-201ENST00000443621 CTAGE4Q8IX94 777 aa3.03□□□□□ -1.92
Retrieved 100 of 20,778 RNA–protein pairs in 18.5 ms