RNA–Protein interactions for RNA: ENST00000443197.5

CALD1-210, Transcript of caldesmon 1, humanhuman

TSL 5

Gene CALD1, Length 4,173 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CALD1-210ENST00000443197 GRID2IPA4D2P6 1211 aa11.3□□□□□ -0.6
CALD1-210ENST00000443197 ZSCAN5CA6NGD5 496 aaPredicted RBP11.3□□□□□ -0.6
CALD1-210ENST00000443197 ZNF263O14978 683 aa11.3□□□□□ -0.6
CALD1-210ENST00000443197 RAD51CO43502 376 aa11.3□□□□□ -0.6
CALD1-210ENST00000443197 ZNF862O60290 1169 aa11.3□□□□□ -0.6
CALD1-210ENST00000443197 GRAP2O75791 330 aa11.3□□□□□ -0.6
CALD1-210ENST00000443197 TMEM253P0C7T8 217 aa11.3□□□□□ -0.6
CALD1-210ENST00000443197 RGS7P49802 495 aa11.3□□□□□ -0.6
CALD1-210ENST00000443197 HIRAP54198 1017 aaPredicted RBP11.3□□□□□ -0.6
CALD1-210ENST00000443197 NNTQ13423 1086 aa11.3□□□□□ -0.6
CALD1-210ENST00000443197 LAMC2Q13753 1193 aa11.3□□□□□ -0.6
CALD1-210ENST00000443197 ZSCAN26Q16670 478 aa11.3□□□□□ -0.6
CALD1-210ENST00000443197 ENOSF1Q7L5Y1 443 aa11.3□□□□□ -0.6
CALD1-210ENST00000443197 GCOM2Q9BZD3 368 aaPredicted RBP11.3□□□□□ -0.6
CALD1-210ENST00000443197 IVLP07476 585 aa11.29□□□□□ -0.6
CALD1-210ENST00000443197 RARBP10826 455 aa11.29□□□□□ -0.6
CALD1-210ENST00000443197 IFNAR2P48551 515 aa11.29□□□□□ -0.6
CALD1-210ENST00000443197 GTF2A2P52657 109 aa11.29□□□□□ -0.6
CALD1-210ENST00000443197 SNX16P57768 344 aa11.29□□□□□ -0.6
CALD1-210ENST00000443197 ATP11AP98196 1134 aa11.29□□□□□ -0.6
CALD1-210ENST00000443197 PAPD7Q5XG87 772 aaKnown RBP11.29□□□□□ -0.6
CALD1-210ENST00000443197 EMBQ6PCB8 327 aa11.29□□□□□ -0.6
CALD1-210ENST00000443197 CCDC137Q6PK04 289 aaKnown RBP11.29□□□□□ -0.6
CALD1-210ENST00000443197 RIOX2Q8IUF8 465 aa11.29□□□□□ -0.6
CALD1-210ENST00000443197 BCAS4Q8TDM0 211 aa11.29□□□□□ -0.6
CALD1-210ENST00000443197 ACSF2Q96CM8 615 aaPredicted RBP11.29□□□□□ -0.6
CALD1-210ENST00000443197 CYFIP2Q96F07 1278 aa11.29□□□□□ -0.6
CALD1-210ENST00000443197 TLR10Q9BXR5 811 aa11.29□□□□□ -0.6
CALD1-210ENST00000443197 KLK14Q9P0G3 267 aa11.29□□□□□ -0.6
CALD1-210ENST00000443197 SYNGAP1Q96PV0 1343 aa11.29□□□□□ -0.6
CALD1-210ENST00000443197 PAPPAQ13219 1627 aa11.29□□□□□ -0.6
CALD1-210ENST00000443197 POC1B-GALNT4F8VUJ3 575 aa11.29□□□□□ -0.6
CALD1-210ENST00000443197 H3BRB1 525 aa11.29□□□□□ -0.6
CALD1-210ENST00000443197 TLR2O60603 784 aa11.29□□□□□ -0.6
CALD1-210ENST00000443197 ITGB3P05106 788 aa11.29□□□□□ -0.6
CALD1-210ENST00000443197 PDGFRBP09619 1106 aa11.29□□□□□ -0.6
CALD1-210ENST00000443197 CYP2C9P11712 490 aa11.29□□□□□ -0.6
CALD1-210ENST00000443197 ZSCAN20P17040 1043 aaPredicted RBP11.29□□□□□ -0.6
CALD1-210ENST00000443197 MYL6P60660 151 aa11.29□□□□□ -0.6
CALD1-210ENST00000443197 ZCWPW2Q504Y3 356 aa11.29□□□□□ -0.6
CALD1-210ENST00000443197 PRAMEF19Q5SWL8 479 aa11.29□□□□□ -0.6
CALD1-210ENST00000443197 CCNI2Q6ZMN8 369 aaPredicted RBP11.29□□□□□ -0.6
CALD1-210ENST00000443197 STMN4Q9H169 189 aaPredicted RBP11.29□□□□□ -0.6
CALD1-210ENST00000443197 TUT1Q9H6E5 874 aaKnown RBP11.29□□□□□ -0.6
CALD1-210ENST00000443197 SETD4Q9NVD3 440 aa11.29□□□□□ -0.6
CALD1-210ENST00000443197 AFG3L2Q9Y4W6 797 aa11.29□□□□□ -0.6
CALD1-210ENST00000443197 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP11.29□□□□□ -0.6
CALD1-210ENST00000443197 LRRIQ3A6PVS8 624 aaPredicted RBP11.29□□□□□ -0.6
CALD1-210ENST00000443197 PDE2AO00408 941 aaPredicted RBP11.29□□□□□ -0.6
CALD1-210ENST00000443197 TOM1L1O75674 476 aa11.29□□□□□ -0.6
CALD1-210ENST00000443197 TNFAIP2Q03169 654 aa11.29□□□□□ -0.6
CALD1-210ENST00000443197 MTM1Q13496 603 aa11.29□□□□□ -0.6
CALD1-210ENST00000443197 AMHR2Q16671 573 aa11.29□□□□□ -0.6
CALD1-210ENST00000443197 RSPH3Q86UC2 560 aa11.29□□□□□ -0.6
CALD1-210ENST00000443197 CTAGE3PQ8IX95 158 aa11.29□□□□□ -0.6
CALD1-210ENST00000443197 GRK7Q8WTQ7 553 aa11.29□□□□□ -0.6
CALD1-210ENST00000443197 CAPS2Q9BXY5 557 aa11.29□□□□□ -0.6
CALD1-210ENST00000443197 GANQ9H2C0 597 aa11.29□□□□□ -0.6
CALD1-210ENST00000443197 PLAAQ9Y263 795 aa11.29□□□□□ -0.6
CALD1-210ENST00000443197 SCINQ9Y6U3 715 aa11.29□□□□□ -0.6
CALD1-210ENST00000443197 P4HA2O15460 535 aa11.28□□□□□ -0.6
CALD1-210ENST00000443197 TGFB3P10600 412 aa11.28□□□□□ -0.6
CALD1-210ENST00000443197 ADORA2BP29275 332 aa11.28□□□□□ -0.6
CALD1-210ENST00000443197 NOVP48745 357 aa11.28□□□□□ -0.6
CALD1-210ENST00000443197 GNASQ5JWF2 1037 aa11.28□□□□□ -0.6
CALD1-210ENST00000443197 CYP4A22Q5TCH4 519 aa11.28□□□□□ -0.6
CALD1-210ENST00000443197 LBX2Q6XYB7 198 aa11.28□□□□□ -0.6
CALD1-210ENST00000443197 MAP4K3Q8IVH8 894 aa11.28□□□□□ -0.6
CALD1-210ENST00000443197 DDX55Q8NHQ9 600 aaKnown RBP eCLIP11.28□□□□□ -0.6
CALD1-210ENST00000443197 BSNDQ8WZ55 320 aa11.28□□□□□ -0.6
CALD1-210ENST00000443197 FAM49BQ9NUQ9 324 aa11.28□□□□□ -0.6
CALD1-210ENST00000443197 SEPT10Q9P0V9 454 aa11.28□□□□□ -0.6
CALD1-210ENST00000443197 ANAPC5Q9UJX4 755 aa11.28□□□□□ -0.6
CALD1-210ENST00000443197 NOVA2Q9UNW9 492 aaKnown RBP11.28□□□□□ -0.6
CALD1-210ENST00000443197 OGTO15294 1046 aa11.28□□□□□ -0.6
CALD1-210ENST00000443197 CXCL8P10145 99 aa11.28□□□□□ -0.6
CALD1-210ENST00000443197 H2AFXP16104 143 aaPredicted RBP11.28□□□□□ -0.6
CALD1-210ENST00000443197 GARTP22102 1010 aa11.28□□□□□ -0.6
CALD1-210ENST00000443197 GLRA2P23416 452 aa11.28□□□□□ -0.6
CALD1-210ENST00000443197 SGSM1Q2NKQ1 1148 aa11.28□□□□□ -0.6
CALD1-210ENST00000443197 GPAT2Q6NUI2 795 aa11.28□□□□□ -0.6
CALD1-210ENST00000443197 C10orf67Q8IYJ2 551 aa11.28□□□□□ -0.6
CALD1-210ENST00000443197 NME8Q8N427 588 aa11.28□□□□□ -0.6
CALD1-210ENST00000443197 CCDC63Q8NA47 563 aa11.28□□□□□ -0.6
CALD1-210ENST00000443197 HVCN1Q96D96 273 aa11.28□□□□□ -0.6
CALD1-210ENST00000443197 MBOAT7Q96N66 472 aa11.28□□□□□ -0.6
CALD1-210ENST00000443197 ANKZF1Q9H8Y5 726 aa11.28□□□□□ -0.6
CALD1-210ENST00000443197 SNCAIPQ9Y6H5 919 aa11.28□□□□□ -0.6
CALD1-210ENST00000443197 GTPBP10A4D1E9 387 aaKnown RBP11.28□□□□□ -0.6
CALD1-210ENST00000443197 A8MXQ7 604 aa11.28□□□□□ -0.6
CALD1-210ENST00000443197 SPATA31C2B4DYI2 1134 aa11.28□□□□□ -0.6
CALD1-210ENST00000443197 GOLGA8MH3BSY2 632 aa11.28□□□□□ -0.6
CALD1-210ENST00000443197 XPOTO43592 962 aaKnown RBP11.28□□□□□ -0.6
CALD1-210ENST00000443197 NOL4O94818 638 aa11.28□□□□□ -0.6
CALD1-210ENST00000443197 RRM1P23921 792 aa11.28□□□□□ -0.6
CALD1-210ENST00000443197 GTF2BQ00403 316 aa11.28□□□□□ -0.6
CALD1-210ENST00000443197 CUL2Q13617 745 aa11.28□□□□□ -0.6
CALD1-210ENST00000443197 GLE1Q53GS7 698 aaKnown RBP11.28□□□□□ -0.6
CALD1-210ENST00000443197 FAM102AQ5T9C2 384 aaPredicted RBP11.28□□□□□ -0.6
CALD1-210ENST00000443197 MICALCLQ6ZW33 695 aa11.28□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 80.6 ms