RNA–Protein interactions for RNA: ENST00000443046.5

HMGN1-208, Transcript of high mobility group nucleosome binding domain 1, humanhuman

TSL 3

Gene HMGN1, Length 823 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1-208ENST00000443046 POLR3FQ9H1D9 316 aaPredicted RBP15.93■□□□□ 0.14
HMGN1-208ENST00000443046 PDZD7Q9H5P4 517 aa15.93■□□□□ 0.14
HMGN1-208ENST00000443046 SNTG2Q9NY99 539 aa15.93■□□□□ 0.14
HMGN1-208ENST00000443046 USP18Q9UMW8 372 aa15.93■□□□□ 0.14
HMGN1-208ENST00000443046 MRPS23Q9Y3D9 190 aaKnown RBP15.93■□□□□ 0.14
HMGN1-208ENST00000443046 BACE2Q9Y5Z0 518 aa15.93■□□□□ 0.14
HMGN1-208ENST00000443046 TRIP11Q15643 1979 aa15.93■□□□□ 0.14
HMGN1-208ENST00000443046 ASPMQ8IZT6 3477 aa15.92■□□□□ 0.14
HMGN1-208ENST00000443046 CNOT1A5YKK6 2376 aaKnown RBP15.92■□□□□ 0.14
HMGN1-208ENST00000443046 ARHGEF37A1IGU5 675 aa15.92■□□□□ 0.14
HMGN1-208ENST00000443046 BAG4O95429 457 aaKnown RBP15.92■□□□□ 0.14
HMGN1-208ENST00000443046 RHOP08100 348 aa15.92■□□□□ 0.14
HMGN1-208ENST00000443046 XRCC6P12956 609 aaKnown RBP eCLIP15.92■□□□□ 0.14
HMGN1-208ENST00000443046 RBM25P49756 843 aaKnown RBP15.92■□□□□ 0.14
HMGN1-208ENST00000443046 NRLP54845 237 aa15.92■□□□□ 0.14
HMGN1-208ENST00000443046 PRSS36Q5K4E3 855 aa15.92■□□□□ 0.14
HMGN1-208ENST00000443046 PIK3AP1Q6ZUJ8 805 aa15.92■□□□□ 0.14
HMGN1-208ENST00000443046 CELF5Q8N6W0 485 aaKnown RBP15.92■□□□□ 0.14
HMGN1-208ENST00000443046 IER2Q9BTL4 223 aa15.92■□□□□ 0.14
HMGN1-208ENST00000443046 TRPV5Q9NQA5 729 aa15.92■□□□□ 0.14
HMGN1-208ENST00000443046 GMEB2Q9UKD1 530 aa15.92■□□□□ 0.14
HMGN1-208ENST00000443046 CDY1Q9Y6F8 540 aa15.92■□□□□ 0.14
HMGN1-208ENST00000443046 MAN2B1O00754 1011 aa15.91■□□□□ 0.14
HMGN1-208ENST00000443046 NRG2O14511 850 aaPredicted RBP15.91■□□□□ 0.14
HMGN1-208ENST00000443046 SLC30A4O14863 429 aa15.91■□□□□ 0.14
HMGN1-208ENST00000443046 MARCH6O60337 910 aa15.91■□□□□ 0.14
HMGN1-208ENST00000443046 LRP3O75074 770 aa15.91■□□□□ 0.14
HMGN1-208ENST00000443046 RECQL4O94761 1208 aa15.91■□□□□ 0.14
HMGN1-208ENST00000443046 MICAL2O94851 1124 aa15.91■□□□□ 0.14
HMGN1-208ENST00000443046 CEBPBP17676 345 aa15.91■□□□□ 0.14
HMGN1-208ENST00000443046 ST3GAL2Q16842 350 aa15.91■□□□□ 0.14
HMGN1-208ENST00000443046 LAIR1Q6GTX8 287 aa15.91■□□□□ 0.14
HMGN1-208ENST00000443046 MAP4K3Q8IVH8 894 aa15.91■□□□□ 0.14
HMGN1-208ENST00000443046 TNFRSF25Q93038 417 aa15.91■□□□□ 0.14
HMGN1-208ENST00000443046 GPRC5CQ9NQ84 441 aa15.91■□□□□ 0.14
HMGN1-208ENST00000443046 GJB4Q9NTQ9 266 aa15.91■□□□□ 0.14
HMGN1-208ENST00000443046 CEP295Q9C0D2 2601 aa15.91■□□□□ 0.14
HMGN1-208ENST00000443046 FAM205CA6NFA0 338 aa15.9■□□□□ 0.14
HMGN1-208ENST00000443046 LRRIQ4A6NIV6 560 aa15.9■□□□□ 0.14
HMGN1-208ENST00000443046 N4BP3O15049 544 aa15.9■□□□□ 0.14
HMGN1-208ENST00000443046 ABLIM3O94929 683 aa15.9■□□□□ 0.14
HMGN1-208ENST00000443046 RETP07949 1114 aa15.9■□□□□ 0.14
HMGN1-208ENST00000443046 PTPN2P17706 415 aa15.9■□□□□ 0.14
HMGN1-208ENST00000443046 SPEM2Q0P670 501 aa15.9■□□□□ 0.14
HMGN1-208ENST00000443046 SLC8B1Q6J4K2 584 aa15.9■□□□□ 0.14
HMGN1-208ENST00000443046 CPLX2Q6PUV4 134 aaKnown RBP15.9■□□□□ 0.14
HMGN1-208ENST00000443046 ZNF461Q8TAF7 563 aa15.9■□□□□ 0.14
HMGN1-208ENST00000443046 NETO1Q8TDF5 533 aa15.9■□□□□ 0.14
HMGN1-208ENST00000443046 PIGOQ8TEQ8 1089 aa15.9■□□□□ 0.14
HMGN1-208ENST00000443046 DDX27Q96GQ7 796 aaKnown RBP15.9■□□□□ 0.14
HMGN1-208ENST00000443046 PPP1R10Q96QC0 940 aaKnown RBP15.9■□□□□ 0.14
HMGN1-208ENST00000443046 LARP6Q9BRS8 491 aaKnown RBP15.9■□□□□ 0.14
HMGN1-208ENST00000443046 CCDC113Q9H0I3 377 aa15.9■□□□□ 0.14
HMGN1-208ENST00000443046 DAXXQ9UER7 740 aaPredicted RBP15.9■□□□□ 0.14
HMGN1-208ENST00000443046 PCDHA12Q9UN75 941 aa15.9■□□□□ 0.14
HMGN1-208ENST00000443046 DYNC1LI1Q9Y6G9 523 aaKnown RBP15.9■□□□□ 0.14
HMGN1-208ENST00000443046 CACNA1GO43497 2377 aa15.89■□□□□ 0.13
HMGN1-208ENST00000443046 A0A087WWV3 80 aa15.89■□□□□ 0.13
HMGN1-208ENST00000443046 EDN1P05305 212 aa15.89■□□□□ 0.13
HMGN1-208ENST00000443046 TKTP29401 623 aaKnown RBP15.89■□□□□ 0.13
HMGN1-208ENST00000443046 CLCNKBP51801 687 aa15.89■□□□□ 0.13
HMGN1-208ENST00000443046 STK3Q13188 491 aa15.89■□□□□ 0.13
HMGN1-208ENST00000443046 UPP1Q16831 310 aa15.89■□□□□ 0.13
HMGN1-208ENST00000443046 FAM78AQ5JUQ0 283 aa15.89■□□□□ 0.13
HMGN1-208ENST00000443046 ANKS3Q6ZW76 656 aa15.89■□□□□ 0.13
HMGN1-208ENST00000443046 NOSTRINQ8IVI9 506 aa15.89■□□□□ 0.13
HMGN1-208ENST00000443046 C3orf58Q8NDZ4 430 aa15.89■□□□□ 0.13
HMGN1-208ENST00000443046 ASB16Q96NS5 453 aa15.89■□□□□ 0.13
HMGN1-208ENST00000443046 SPEGQ15772 3267 aa15.89■□□□□ 0.13
HMGN1-208ENST00000443046 STK36Q9NRP7 1315 aa15.89■□□□□ 0.13
HMGN1-208ENST00000443046 RALGAPA1Q6GYQ0 2036 aa15.89■□□□□ 0.13
HMGN1-208ENST00000443046 ACKR2O00590 384 aa15.88■□□□□ 0.13
HMGN1-208ENST00000443046 USO1O60763 962 aaKnown RBP15.88■□□□□ 0.13
HMGN1-208ENST00000443046 B3GAT3O94766 335 aa15.88■□□□□ 0.13
HMGN1-208ENST00000443046 SPATA31C1P0DKV0 1188 aa15.88■□□□□ 0.13
HMGN1-208ENST00000443046 SCRN1Q12765 414 aa15.88■□□□□ 0.13
HMGN1-208ENST00000443046 PRPF4BQ13523 1007 aaKnown RBP15.88■□□□□ 0.13
HMGN1-208ENST00000443046 GRM2Q14416 872 aa15.88■□□□□ 0.13
HMGN1-208ENST00000443046 PPM1JQ5JR12 505 aa15.88■□□□□ 0.13
HMGN1-208ENST00000443046 EEF1DP3Q658K8 133 aa15.88■□□□□ 0.13
HMGN1-208ENST00000443046 ZBTB8OSQ8IWT0 167 aa15.88■□□□□ 0.13
HMGN1-208ENST00000443046 TCEAL8Q8IYN2 117 aa15.88■□□□□ 0.13
HMGN1-208ENST00000443046 MCPH1Q8NEM0 835 aa15.88■□□□□ 0.13
HMGN1-208ENST00000443046 BSNDQ8WZ55 320 aa15.88■□□□□ 0.13
HMGN1-208ENST00000443046 IRF7Q92985 503 aa15.88■□□□□ 0.13
HMGN1-208ENST00000443046 TCEAL4Q96EI5 215 aa15.88■□□□□ 0.13
HMGN1-208ENST00000443046 UROC1Q96N76 676 aa15.88■□□□□ 0.13
HMGN1-208ENST00000443046 MTMR9Q96QG7 549 aa15.88■□□□□ 0.13
HMGN1-208ENST00000443046 TRMT61BQ9BVS5 477 aaKnown RBP15.88■□□□□ 0.13
HMGN1-208ENST00000443046 TM6SF1Q9BZW5 370 aa15.88■□□□□ 0.13
HMGN1-208ENST00000443046 C2orf40Q9H1Z8 148 aa15.88■□□□□ 0.13
HMGN1-208ENST00000443046 TTC12Q9H892 705 aaPredicted RBP15.88■□□□□ 0.13
HMGN1-208ENST00000443046 LMAN1LQ9HAT1 526 aa15.88■□□□□ 0.13
HMGN1-208ENST00000443046 ZFP14Q9HCL3 533 aa15.88■□□□□ 0.13
HMGN1-208ENST00000443046 ZNF334Q9HCZ1 680 aaPredicted RBP15.88■□□□□ 0.13
HMGN1-208ENST00000443046 NDRG2Q9UN36 371 aaKnown RBP15.88■□□□□ 0.13
HMGN1-208ENST00000443046 USP20Q9Y2K6 914 aa15.88■□□□□ 0.13
HMGN1-208ENST00000443046 CYP46A1Q9Y6A2 500 aa15.88■□□□□ 0.13
HMGN1-208ENST00000443046 TICRRQ7Z2Z1 1910 aa15.88■□□□□ 0.13
HMGN1-208ENST00000443046 WDR27A2RRH5 827 aa15.87■□□□□ 0.13
Retrieved 100 of 20,778 RNA–protein pairs in 17.4 ms