RNA–Protein interactions for RNA: ENST00000442842.5

TM9SF4-204, Transcript of transmembrane 9 superfamily member 4, humanhuman

TSL 4

Gene TM9SF4, Length 563 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TM9SF4-204ENST00000442842 CD302Q8IX05 232 aa14.7□□□□□ -0.06
TM9SF4-204ENST00000442842 TMEM130Q8N3G9 435 aa14.7□□□□□ -0.06
TM9SF4-204ENST00000442842 PLEKHO2Q8TD55 490 aa14.7□□□□□ -0.06
TM9SF4-204ENST00000442842 ZNF689Q96CS4 500 aaPredicted RBP14.7□□□□□ -0.06
TM9SF4-204ENST00000442842 MFSD14AQ96MC6 490 aa14.7□□□□□ -0.06
TM9SF4-204ENST00000442842 POP1Q99575 1024 aaKnown RBP14.7□□□□□ -0.06
TM9SF4-204ENST00000442842 MTMR12Q9C0I1 747 aa14.7□□□□□ -0.06
TM9SF4-204ENST00000442842 ASB7Q9H672 318 aa14.7□□□□□ -0.06
TM9SF4-204ENST00000442842 RC3H2Q9HBD1 1191 aaKnown RBP14.7□□□□□ -0.06
TM9SF4-204ENST00000442842 GOLGA2P5Q9HBQ8 144 aa14.7□□□□□ -0.06
TM9SF4-204ENST00000442842 FANCLQ9NW38 375 aa14.7□□□□□ -0.06
TM9SF4-204ENST00000442842 CACNG4Q9UBN1 327 aa14.7□□□□□ -0.06
TM9SF4-204ENST00000442842 COL4A6Q14031 1691 aa14.7□□□□□ -0.06
TM9SF4-204ENST00000442842 PTPRSQ13332 1948 aa14.69□□□□□ -0.06
TM9SF4-204ENST00000442842 LCHNA4D1U4 455 aa14.69□□□□□ -0.06
TM9SF4-204ENST00000442842 KCNJ18B7U540 433 aa14.69□□□□□ -0.06
TM9SF4-204ENST00000442842 GOLGA6L19H0YKK7 550 aa14.69□□□□□ -0.06
TM9SF4-204ENST00000442842 IKBKBO14920 756 aa14.69□□□□□ -0.06
TM9SF4-204ENST00000442842 MAPK13O15264 365 aa14.69□□□□□ -0.06
TM9SF4-204ENST00000442842 MYOGP15173 224 aa14.69□□□□□ -0.06
TM9SF4-204ENST00000442842 KCNE1P15382 129 aa14.69□□□□□ -0.06
TM9SF4-204ENST00000442842 TPM4P67936 248 aa14.69□□□□□ -0.06
TM9SF4-204ENST00000442842 HTRA4P83105 476 aaPredicted RBP14.69□□□□□ -0.06
TM9SF4-204ENST00000442842 KCNJ12Q14500 433 aa14.69□□□□□ -0.06
TM9SF4-204ENST00000442842 NCAPHQ15003 741 aa14.69□□□□□ -0.06
TM9SF4-204ENST00000442842 SURF1Q15526 300 aa14.69□□□□□ -0.06
TM9SF4-204ENST00000442842 PRPF38BQ5VTL8 546 aaKnown RBP14.69□□□□□ -0.06
TM9SF4-204ENST00000442842 ALKAL1Q6UXT8 129 aa14.69□□□□□ -0.06
TM9SF4-204ENST00000442842 USP37Q86T82 979 aa14.69□□□□□ -0.06
TM9SF4-204ENST00000442842 WDR49Q8IV35 697 aa14.69□□□□□ -0.06
TM9SF4-204ENST00000442842 CMTR2Q8IYT2 770 aaKnown RBP14.69□□□□□ -0.06
TM9SF4-204ENST00000442842 FIBCD1Q8N539 461 aa14.69□□□□□ -0.06
TM9SF4-204ENST00000442842 GSTCDQ8NEC7 633 aa14.69□□□□□ -0.06
TM9SF4-204ENST00000442842 BEST2Q8NFU1 509 aa14.69□□□□□ -0.06
TM9SF4-204ENST00000442842 PARD3BQ8TEW8 1205 aa14.69□□□□□ -0.06
TM9SF4-204ENST00000442842 ANKRD36BP1Q96IX9 119 aa14.69□□□□□ -0.06
TM9SF4-204ENST00000442842 PPP1R10Q96QC0 940 aaKnown RBP14.69□□□□□ -0.06
TM9SF4-204ENST00000442842 RAD9AQ99638 391 aa14.69□□□□□ -0.06
TM9SF4-204ENST00000442842 ANP32EQ9BTT0 268 aa14.69□□□□□ -0.06
TM9SF4-204ENST00000442842 METTL14Q9HCE5 456 aaKnown RBP14.69□□□□□ -0.06
TM9SF4-204ENST00000442842 UBQLN1Q9UMX0 589 aaKnown RBP14.69□□□□□ -0.06
TM9SF4-204ENST00000442842 INSL6Q9Y581 213 aa14.69□□□□□ -0.06
TM9SF4-204ENST00000442842 MRPL42Q9Y6G3 142 aaKnown RBP14.69□□□□□ -0.06
TM9SF4-204ENST00000442842 RALGAPA2Q2PPJ7 1873 aa14.69□□□□□ -0.06
TM9SF4-204ENST00000442842 INPPL1O15357 1258 aa14.68□□□□□ -0.06
TM9SF4-204ENST00000442842 XPOTO43592 962 aaKnown RBP14.68□□□□□ -0.06
TM9SF4-204ENST00000442842 B4GALT3O60512 393 aa14.68□□□□□ -0.06
TM9SF4-204ENST00000442842 DDHD2O94830 711 aa14.68□□□□□ -0.06
TM9SF4-204ENST00000442842 CAVIN2O95810 425 aa14.68□□□□□ -0.06
TM9SF4-204ENST00000442842 TNNC2P02585 160 aa14.68□□□□□ -0.06
TM9SF4-204ENST00000442842 PBX3P40426 434 aa14.68□□□□□ -0.06
TM9SF4-204ENST00000442842 OR1G1P47890 313 aa14.68□□□□□ -0.06
TM9SF4-204ENST00000442842 POU5F1Q01860 360 aaKnown RBP14.68□□□□□ -0.06
TM9SF4-204ENST00000442842 SOX4Q06945 474 aaPredicted RBP14.68□□□□□ -0.06
TM9SF4-204ENST00000442842 BIRC3Q13489 604 aa14.68□□□□□ -0.06
TM9SF4-204ENST00000442842 IQCB1Q15051 598 aa14.68□□□□□ -0.06
TM9SF4-204ENST00000442842 XKR4Q5GH76 650 aa14.68□□□□□ -0.06
TM9SF4-204ENST00000442842 FRMD5Q7Z6J6 570 aa14.68□□□□□ -0.06
TM9SF4-204ENST00000442842 ZNF280BQ86YH2 543 aa14.68□□□□□ -0.06
TM9SF4-204ENST00000442842 OR5B17Q8NGF7 314 aa14.68□□□□□ -0.06
TM9SF4-204ENST00000442842 RABGGTAQ92696 567 aa14.68□□□□□ -0.06
TM9SF4-204ENST00000442842 PRO3102Q9H379 93 aa14.68□□□□□ -0.06
TM9SF4-204ENST00000442842 SLC38A7Q9NVC3 462 aa14.68□□□□□ -0.06
TM9SF4-204ENST00000442842 KANSL3Q9P2N6 904 aa14.68□□□□□ -0.06
TM9SF4-204ENST00000442842 DNAJB4Q9UDY4 337 aa14.68□□□□□ -0.06
TM9SF4-204ENST00000442842 COLQQ9Y215 455 aaPredicted RBP14.68□□□□□ -0.06
TM9SF4-204ENST00000442842 PRG3Q9Y2Y8 225 aaPredicted RBP14.68□□□□□ -0.06
TM9SF4-204ENST00000442842 DERAQ9Y315 318 aa14.68□□□□□ -0.06
TM9SF4-204ENST00000442842 C2CD2Q9Y426 696 aa14.68□□□□□ -0.06
TM9SF4-204ENST00000442842 HSFX4A0A1B0GTS1 333 aaPredicted RBP14.67□□□□□ -0.06
TM9SF4-204ENST00000442842 HSFX3A0A1B0GWH4 333 aaPredicted RBP14.67□□□□□ -0.06
TM9SF4-204ENST00000442842 PES1O00541 588 aaKnown RBP14.67□□□□□ -0.06
TM9SF4-204ENST00000442842 CA3P07451 260 aa14.67□□□□□ -0.06
TM9SF4-204ENST00000442842 KRT19P08727 400 aa14.67□□□□□ -0.06
TM9SF4-204ENST00000442842 PRKCSHP14314 528 aaPredicted RBP14.67□□□□□ -0.06
TM9SF4-204ENST00000442842 CDK11BP21127 795 aaKnown RBP14.67□□□□□ -0.06
TM9SF4-204ENST00000442842 PBX2P40425 430 aa14.67□□□□□ -0.06
TM9SF4-204ENST00000442842 GCLMP48507 274 aa14.67□□□□□ -0.06
TM9SF4-204ENST00000442842 TUSC3Q13454 348 aa14.67□□□□□ -0.06
TM9SF4-204ENST00000442842 TCP11X2Q5H9J9 407 aa14.67□□□□□ -0.06
TM9SF4-204ENST00000442842 CDKAL1Q5VV42 579 aa14.67□□□□□ -0.06
TM9SF4-204ENST00000442842 IRF2BP1Q8IU81 584 aa14.67□□□□□ -0.06
TM9SF4-204ENST00000442842 TMC2Q8TDI7 906 aa14.67□□□□□ -0.06
TM9SF4-204ENST00000442842 RSPH1Q8WYR4 309 aa14.67□□□□□ -0.06
TM9SF4-204ENST00000442842 BORCS6Q96GS4 357 aa14.67□□□□□ -0.06
TM9SF4-204ENST00000442842 PBX4Q9BYU1 374 aa14.67□□□□□ -0.06
TM9SF4-204ENST00000442842 NRDE2Q9H7Z3 1164 aa14.67□□□□□ -0.06
TM9SF4-204ENST00000442842 INTS13Q9NVM9 706 aa14.67□□□□□ -0.06
TM9SF4-204ENST00000442842 TAB2Q9NYJ8 693 aa14.67□□□□□ -0.06
TM9SF4-204ENST00000442842 YBX2Q9Y2T7 364 aaKnown RBP14.67□□□□□ -0.06
TM9SF4-204ENST00000442842 UTP18Q9Y5J1 556 aaKnown RBP eCLIP14.67□□□□□ -0.06
TM9SF4-204ENST00000442842 PODXLO00592 558 aa14.66□□□□□ -0.06
TM9SF4-204ENST00000442842 PHACTR2O75167 634 aa14.66□□□□□ -0.06
TM9SF4-204ENST00000442842 ITGB3P05106 788 aa14.66□□□□□ -0.06
TM9SF4-204ENST00000442842 ATP1A3P13637 1013 aa14.66□□□□□ -0.06
TM9SF4-204ENST00000442842 EEF1GP26641 437 aaKnown RBP14.66□□□□□ -0.06
TM9SF4-204ENST00000442842 MXI1P50539 228 aa14.66□□□□□ -0.06
TM9SF4-204ENST00000442842 CLCNKBP51801 687 aa14.66□□□□□ -0.06
TM9SF4-204ENST00000442842 NAB2Q15742 525 aa14.66□□□□□ -0.06
TM9SF4-204ENST00000442842 RAB30Q15771 203 aa14.66□□□□□ -0.06
Retrieved 100 of 20,778 RNA–protein pairs in 25.6 ms