RNA–Protein interactions for RNA: ENST00000442830.5

PTPRE-203, Transcript of protein tyrosine phosphatase, receptor type E, humanhuman

TSL 5

Gene PTPRE, Length 779 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRE-203ENST00000442830 PABPC1LQ4VXU2 614 aaKnown RBP15.16■□□□□ 0.02
PTPRE-203ENST00000442830 KRT79Q5XKE5 535 aa15.16■□□□□ 0.02
PTPRE-203ENST00000442830 ERMP1Q7Z2K6 904 aa15.16■□□□□ 0.02
PTPRE-203ENST00000442830 CCDC83Q8IWF9 413 aa15.16■□□□□ 0.02
PTPRE-203ENST00000442830 SLC7A14Q8TBB6 771 aa15.16■□□□□ 0.02
PTPRE-203ENST00000442830 MRPL4Q9BYD3 311 aaKnown RBP15.16■□□□□ 0.02
PTPRE-203ENST00000442830 OSBPL6Q9BZF3 934 aa15.16■□□□□ 0.02
PTPRE-203ENST00000442830 AVENQ9NQS1 362 aaPredicted RBP15.16■□□□□ 0.02
PTPRE-203ENST00000442830 MAFFQ9ULX9 164 aa15.16■□□□□ 0.02
PTPRE-203ENST00000442830 DMDP11532 3685 aa15.16■□□□□ 0.02
PTPRE-203ENST00000442830 PDCD11Q14690 1871 aaKnown RBP15.15■□□□□ 0.02
PTPRE-203ENST00000442830 A0A087WWV3 80 aa15.15■□□□□ 0.02
PTPRE-203ENST00000442830 SYN3O14994 580 aa15.15■□□□□ 0.02
PTPRE-203ENST00000442830 DTNBO60941 627 aa15.15■□□□□ 0.02
PTPRE-203ENST00000442830 LMNAP02545 664 aaKnown RBP15.15■□□□□ 0.02
PTPRE-203ENST00000442830 MYBP10242 640 aa15.15■□□□□ 0.02
PTPRE-203ENST00000442830 ELF1P32519 619 aa15.15■□□□□ 0.02
PTPRE-203ENST00000442830 OR1D2P34982 312 aa15.15■□□□□ 0.02
PTPRE-203ENST00000442830 PRPHP41219 470 aa15.15■□□□□ 0.02
PTPRE-203ENST00000442830 UPP1Q16831 310 aa15.15■□□□□ 0.02
PTPRE-203ENST00000442830 ZNF568Q3ZCX4 644 aa15.15■□□□□ 0.02
PTPRE-203ENST00000442830 ADSSL1Q8N142 457 aa15.15■□□□□ 0.02
PTPRE-203ENST00000442830 IGSF22Q8N9C0 903 aa15.15■□□□□ 0.02
PTPRE-203ENST00000442830 PJA1Q8NG27 643 aa15.15■□□□□ 0.02
PTPRE-203ENST00000442830 SNX29Q8TEQ0 813 aa15.15■□□□□ 0.02
PTPRE-203ENST00000442830 RABGGTAQ92696 567 aa15.15■□□□□ 0.02
PTPRE-203ENST00000442830 FGF13Q92913 245 aa15.15■□□□□ 0.02
PTPRE-203ENST00000442830 GDE1Q9NZC3 331 aa15.15■□□□□ 0.02
PTPRE-203ENST00000442830 POLIQ9UNA4 740 aa15.15■□□□□ 0.02
PTPRE-203ENST00000442830 KIAA1024Q9UPX6 916 aa15.15■□□□□ 0.02
PTPRE-203ENST00000442830 TTLL13PA6NNM8 815 aa15.14■□□□□ 0.01
PTPRE-203ENST00000442830 CCDC169A6NNP5 214 aa15.14■□□□□ 0.01
PTPRE-203ENST00000442830 H7C4K7 107 aa15.14■□□□□ 0.01
PTPRE-203ENST00000442830 CCL16O15467 120 aa15.14■□□□□ 0.01
PTPRE-203ENST00000442830 MCF2P10911 925 aa15.14■□□□□ 0.01
PTPRE-203ENST00000442830 SCP2P22307 547 aa15.14■□□□□ 0.01
PTPRE-203ENST00000442830 U2AF2P26368 475 aaKnown RBP eCLIP15.14■□□□□ 0.01
PTPRE-203ENST00000442830 RPL9P32969 192 aaKnown RBP15.14■□□□□ 0.01
PTPRE-203ENST00000442830 XKR4Q5GH76 650 aa15.14■□□□□ 0.01
PTPRE-203ENST00000442830 EEF1DP3Q658K8 133 aa15.14■□□□□ 0.01
PTPRE-203ENST00000442830 SLC8B1Q6J4K2 584 aa15.14■□□□□ 0.01
PTPRE-203ENST00000442830 C1orf210Q8IVY1 113 aa15.14■□□□□ 0.01
PTPRE-203ENST00000442830 NELL2Q99435 816 aa15.14■□□□□ 0.01
PTPRE-203ENST00000442830 ACO2Q99798 780 aaKnown RBP15.14■□□□□ 0.01
PTPRE-203ENST00000442830 BCO2Q9BYV7 579 aa15.14■□□□□ 0.01
PTPRE-203ENST00000442830 KMT5AQ9NQR1 393 aa15.14■□□□□ 0.01
PTPRE-203ENST00000442830 DDX19AQ9NUU7 478 aaKnown RBP15.14■□□□□ 0.01
PTPRE-203ENST00000442830 CACNG4Q9UBN1 327 aa15.14■□□□□ 0.01
PTPRE-203ENST00000442830 CDY1Q9Y6F8 540 aa15.14■□□□□ 0.01
PTPRE-203ENST00000442830 CACNA1IQ9P0X4 2223 aa15.14■□□□□ 0.01
PTPRE-203ENST00000442830 EP300Q09472 2414 aaPredicted RBP15.14■□□□□ 0.01
PTPRE-203ENST00000442830 NOTCH4Q99466 2003 aa15.14■□□□□ 0.01
PTPRE-203ENST00000442830 SMIM28A0A1B0GU29 152 aa15.13■□□□□ 0.01
PTPRE-203ENST00000442830 KANSL1LA0AUZ9 987 aa15.13■□□□□ 0.01
PTPRE-203ENST00000442830 ARHGEF37A1IGU5 675 aa15.13■□□□□ 0.01
PTPRE-203ENST00000442830 H0YCG3 227 aa15.13■□□□□ 0.01
PTPRE-203ENST00000442830 ZNF197O14709 1029 aa15.13■□□□□ 0.01
PTPRE-203ENST00000442830 NCAM2O15394 837 aa15.13■□□□□ 0.01
PTPRE-203ENST00000442830 ECI2O75521 394 aa15.13■□□□□ 0.01
PTPRE-203ENST00000442830 MICAL2O94851 1124 aa15.13■□□□□ 0.01
PTPRE-203ENST00000442830 LRG1P02750 347 aa15.13■□□□□ 0.01
PTPRE-203ENST00000442830 NPTX2P47972 431 aa15.13■□□□□ 0.01
PTPRE-203ENST00000442830 CLCNKBP51801 687 aa15.13■□□□□ 0.01
PTPRE-203ENST00000442830 PEX3P56589 373 aa15.13■□□□□ 0.01
PTPRE-203ENST00000442830 ST3GAL1Q11201 340 aa15.13■□□□□ 0.01
PTPRE-203ENST00000442830 STRN3Q13033 797 aa15.13■□□□□ 0.01
PTPRE-203ENST00000442830 MLF2Q15773 248 aaPredicted RBP15.13■□□□□ 0.01
PTPRE-203ENST00000442830 ZNF528Q3MIS6 628 aa15.13■□□□□ 0.01
PTPRE-203ENST00000442830 NT5DC1Q5TFE4 455 aa15.13■□□□□ 0.01
PTPRE-203ENST00000442830 TPGS2Q68CL5 300 aa15.13■□□□□ 0.01
PTPRE-203ENST00000442830 MPZL3Q6UWV2 235 aa15.13■□□□□ 0.01
PTPRE-203ENST00000442830 ELMOD1Q8N336 334 aa15.13■□□□□ 0.01
PTPRE-203ENST00000442830 ZNF461Q8TAF7 563 aa15.13■□□□□ 0.01
PTPRE-203ENST00000442830 KCNG4Q8TDN1 519 aa15.13■□□□□ 0.01
PTPRE-203ENST00000442830 FGF14Q92915 247 aa15.13■□□□□ 0.01
PTPRE-203ENST00000442830 ACAP3Q96P50 834 aa15.13■□□□□ 0.01
PTPRE-203ENST00000442830 OXCT2Q9BYC2 517 aaPredicted RBP15.13■□□□□ 0.01
PTPRE-203ENST00000442830 KCND2Q9NZV8 630 aa15.13■□□□□ 0.01
PTPRE-203ENST00000442830 ARHGAP28Q9P2N2 729 aa15.13■□□□□ 0.01
PTPRE-203ENST00000442830 MRPS17Q9Y2R5 130 aaKnown RBP15.13■□□□□ 0.01
PTPRE-203ENST00000442830 MRPS23Q9Y3D9 190 aaKnown RBP15.13■□□□□ 0.01
PTPRE-203ENST00000442830 PATJQ8NI35 1801 aa15.13■□□□□ 0.01
PTPRE-203ENST00000442830 KCNE1P15382 129 aa15.12■□□□□ 0.01
PTPRE-203ENST00000442830 SMTNP53814 917 aa15.12■□□□□ 0.01
PTPRE-203ENST00000442830 GPC5P78333 572 aa15.12■□□□□ 0.01
PTPRE-203ENST00000442830 PTGDRQ13258 359 aa15.12■□□□□ 0.01
PTPRE-203ENST00000442830 KYAT1Q16773 422 aa15.12■□□□□ 0.01
PTPRE-203ENST00000442830 GLRA4Q5JXX5 417 aa15.12■□□□□ 0.01
PTPRE-203ENST00000442830 PARM1Q6UWI2 310 aa15.12■□□□□ 0.01
PTPRE-203ENST00000442830 ALKAL1Q6UXT8 129 aa15.12■□□□□ 0.01
PTPRE-203ENST00000442830 DTHD1Q6ZMT9 781 aa15.12■□□□□ 0.01
PTPRE-203ENST00000442830 C4orf32Q8N8J7 132 aa15.12■□□□□ 0.01
PTPRE-203ENST00000442830 LEMD2Q8NC56 503 aa15.12■□□□□ 0.01
PTPRE-203ENST00000442830 TCHPQ9BT92 498 aa15.12■□□□□ 0.01
PTPRE-203ENST00000442830 DDX23Q9BUQ8 820 aaKnown RBP15.12■□□□□ 0.01
PTPRE-203ENST00000442830 KIFC3Q9BVG8 833 aa15.12■□□□□ 0.01
PTPRE-203ENST00000442830 CDT1Q9H211 546 aa15.12■□□□□ 0.01
PTPRE-203ENST00000442830 DLGAP2Q9P1A6 1054 aa15.12■□□□□ 0.01
PTPRE-203ENST00000442830 CNTN3Q9P232 1028 aa15.12■□□□□ 0.01
PTPRE-203ENST00000442830 FBXO4Q9UKT5 387 aa15.12■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 23.9 ms