RNA–Protein interactions for RNA: ENST00000442461.6

LIN54-202, Transcript of lin-54 DREAM MuvB core complex component, humanhuman

TSL 1 (best) BASIC

Gene LIN54, Length 4,254 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIN54-202ENST00000442461 GSNP06396 782 aa10.86□□□□□ -0.67
LIN54-202ENST00000442461 LYNP07948 512 aa10.86□□□□□ -0.67
LIN54-202ENST00000442461 CD44P16070 742 aaKnown RBP10.86□□□□□ -0.67
LIN54-202ENST00000442461 TTKP33981 857 aa10.86□□□□□ -0.67
LIN54-202ENST00000442461 COILP38432 576 aaPredicted RBP10.86□□□□□ -0.67
LIN54-202ENST00000442461 FNTAP49354 379 aa10.86□□□□□ -0.67
LIN54-202ENST00000442461 RCAN1P53805 252 aa10.86□□□□□ -0.67
LIN54-202ENST00000442461 NAA20P61599 178 aa10.86□□□□□ -0.67
LIN54-202ENST00000442461 YWHAEP62258 255 aaKnown RBP10.86□□□□□ -0.67
LIN54-202ENST00000442461 LPIN1Q14693 890 aa10.86□□□□□ -0.67
LIN54-202ENST00000442461 PTPAQ15257 358 aa10.86□□□□□ -0.67
LIN54-202ENST00000442461 KIF19Q2TAC6 998 aa10.86□□□□□ -0.67
LIN54-202ENST00000442461 CDH24Q86UP0 819 aa10.86□□□□□ -0.67
LIN54-202ENST00000442461 ANKMY2Q8IV38 441 aa10.86□□□□□ -0.67
LIN54-202ENST00000442461 SLC25A41Q8N5S1 370 aa10.86□□□□□ -0.67
LIN54-202ENST00000442461 GIMAP8Q8ND71 665 aaPredicted RBP10.86□□□□□ -0.67
LIN54-202ENST00000442461 TPCN2Q8NHX9 752 aa10.86□□□□□ -0.67
LIN54-202ENST00000442461 DDX17Q92841 729 aaKnown RBP10.86□□□□□ -0.67
LIN54-202ENST00000442461 RNF25Q96BH1 459 aaPredicted RBP10.86□□□□□ -0.67
LIN54-202ENST00000442461 ECSITQ9BQ95 431 aa10.86□□□□□ -0.67
LIN54-202ENST00000442461 SLC5A4Q9NY91 659 aa10.86□□□□□ -0.67
LIN54-202ENST00000442461 SPATA7Q9P0W8 599 aa10.86□□□□□ -0.67
LIN54-202ENST00000442461 GPC6Q9Y625 555 aaPredicted RBP10.86□□□□□ -0.67
LIN54-202ENST00000442461 PLCH2O75038 1416 aa10.86□□□□□ -0.67
LIN54-202ENST00000442461 YTHDC2Q9H6S0 1430 aaKnown RBP10.86□□□□□ -0.67
LIN54-202ENST00000442461 A0A087WXM4 84 aa10.86□□□□□ -0.67
LIN54-202ENST00000442461 A0A087X0T9 212 aa10.86□□□□□ -0.67
LIN54-202ENST00000442461 SPDYE5A6NIY4 337 aa10.86□□□□□ -0.67
LIN54-202ENST00000442461 FAM228BP0C875 321 aa10.86□□□□□ -0.67
LIN54-202ENST00000442461 PMLP29590 882 aa10.86□□□□□ -0.67
LIN54-202ENST00000442461 CYP4A11Q02928 519 aa10.86□□□□□ -0.67
LIN54-202ENST00000442461 SGMS1Q86VZ5 419 aa10.86□□□□□ -0.67
LIN54-202ENST00000442461 RHPN2Q8IUC4 686 aa10.86□□□□□ -0.67
LIN54-202ENST00000442461 OR6Y1Q8NGX8 325 aa10.86□□□□□ -0.67
LIN54-202ENST00000442461 NAT14Q8WUY8 206 aa10.86□□□□□ -0.67
LIN54-202ENST00000442461 BORCS5Q969J3 196 aa10.86□□□□□ -0.67
LIN54-202ENST00000442461 LRRC59Q96AG4 307 aaKnown RBP10.86□□□□□ -0.67
LIN54-202ENST00000442461 GCNAQ96QF7 691 aa10.86□□□□□ -0.67
LIN54-202ENST00000442461 SOX13Q9UN79 622 aa10.86□□□□□ -0.67
LIN54-202ENST00000442461 AGPSO00116 658 aa10.86□□□□□ -0.67
LIN54-202ENST00000442461 ITGA2BP08514 1039 aa10.86□□□□□ -0.67
LIN54-202ENST00000442461 HSPA1AP0DMV8 641 aaKnown RBP10.86□□□□□ -0.67
LIN54-202ENST00000442461 HSPA1BP0DMV9 641 aaKnown RBP10.86□□□□□ -0.67
LIN54-202ENST00000442461 CNGA2Q16280 664 aa10.86□□□□□ -0.67
LIN54-202ENST00000442461 FAM13CQ8NE31 585 aa10.86□□□□□ -0.67
LIN54-202ENST00000442461 MTMR8Q96EF0 704 aa10.86□□□□□ -0.67
LIN54-202ENST00000442461 TMEM120AQ9BXJ8 343 aa10.86□□□□□ -0.67
LIN54-202ENST00000442461 DIABLOQ9NR28 239 aa10.86□□□□□ -0.67
LIN54-202ENST00000442461 TMED5Q9Y3A6 229 aa10.86□□□□□ -0.67
LIN54-202ENST00000442461 TRIM17Q9Y577 477 aa10.86□□□□□ -0.67
LIN54-202ENST00000442461 ATP10DQ9P241 1426 aa10.86□□□□□ -0.67
LIN54-202ENST00000442461 WDR17Q8IZU2 1322 aa10.85□□□□□ -0.67
LIN54-202ENST00000442461 POTECB2RU33 542 aa10.85□□□□□ -0.67
LIN54-202ENST00000442461 PI4K2BG5E9Z4 385 aa10.85□□□□□ -0.67
LIN54-202ENST00000442461 CLDN3O15551 220 aa10.85□□□□□ -0.67
LIN54-202ENST00000442461 XPOTO43592 962 aaKnown RBP10.85□□□□□ -0.67
LIN54-202ENST00000442461 JAK1P23458 1154 aa10.85□□□□□ -0.67
LIN54-202ENST00000442461 SOX5P35711 763 aa10.85□□□□□ -0.67
LIN54-202ENST00000442461 CDK7P50613 346 aa10.85□□□□□ -0.67
LIN54-202ENST00000442461 TTC27Q6P3X3 843 aa10.85□□□□□ -0.67
LIN54-202ENST00000442461 RINLQ6ZS11 566 aa10.85□□□□□ -0.67
LIN54-202ENST00000442461 CCNJLQ8IV13 435 aa10.85□□□□□ -0.67
LIN54-202ENST00000442461 RHOT1Q8IXI2 618 aa10.85□□□□□ -0.67
LIN54-202ENST00000442461 SCAIQ8N9R8 606 aa10.85□□□□□ -0.67
LIN54-202ENST00000442461 TNIP2Q8NFZ5 429 aa10.85□□□□□ -0.67
LIN54-202ENST00000442461 COX4I2Q96KJ9 171 aa10.85□□□□□ -0.67
LIN54-202ENST00000442461 PLEKHG4BQ96PX9 1271 aa10.85□□□□□ -0.67
LIN54-202ENST00000442461 CCSER1Q9C0I3 900 aa10.85□□□□□ -0.67
LIN54-202ENST00000442461 BHMT2Q9H2M3 363 aa10.85□□□□□ -0.67
LIN54-202ENST00000442461 PSTPIP2Q9H939 334 aa10.85□□□□□ -0.67
LIN54-202ENST00000442461 PKD2L1Q9P0L9 805 aa10.85□□□□□ -0.67
LIN54-202ENST00000442461 ARHGAP20Q9P2F6 1191 aa10.85□□□□□ -0.67
LIN54-202ENST00000442461 COPG2Q9UBF2 871 aa10.85□□□□□ -0.67
LIN54-202ENST00000442461 SUN2Q9UH99 717 aa10.85□□□□□ -0.67
LIN54-202ENST00000442461 DOLKQ9UPQ8 538 aa10.85□□□□□ -0.67
LIN54-202ENST00000442461 DMTF1Q9Y222 760 aa10.85□□□□□ -0.67
LIN54-202ENST00000442461 ALG6Q9Y672 507 aa10.85□□□□□ -0.67
LIN54-202ENST00000442461 PCDH11YQ9BZA8 1340 aa10.85□□□□□ -0.67
LIN54-202ENST00000442461 FCHO1O14526 889 aa10.85□□□□□ -0.67
LIN54-202ENST00000442461 ZBED1O96006 694 aa10.85□□□□□ -0.67
LIN54-202ENST00000442461 RAB15P59190 212 aa10.85□□□□□ -0.67
LIN54-202ENST00000442461 TBC1D9BQ66K14 1250 aa10.85□□□□□ -0.67
LIN54-202ENST00000442461 RAB44Q7Z6P3 723 aaPredicted RBP10.85□□□□□ -0.67
LIN54-202ENST00000442461 TTC8Q8TAM2 541 aa10.85□□□□□ -0.67
LIN54-202ENST00000442461 TMEM79Q9BSE2 394 aa10.85□□□□□ -0.67
LIN54-202ENST00000442461 C1orf50Q9BV19 199 aa10.85□□□□□ -0.67
LIN54-202ENST00000442461 NACA2Q9H009 215 aa10.85□□□□□ -0.67
LIN54-202ENST00000442461 PRDM15P57071 1507 aaPredicted RBP10.85□□□□□ -0.67
LIN54-202ENST00000442461 KDM6BO15054 1643 aa10.85□□□□□ -0.67
LIN54-202ENST00000442461 A0A0U1RQJ8 604 aa10.85□□□□□ -0.67
LIN54-202ENST00000442461 KCNQ3O43525 872 aa10.85□□□□□ -0.67
LIN54-202ENST00000442461 TMEM253P0C7T8 217 aa10.85□□□□□ -0.67
LIN54-202ENST00000442461 UCHL3P15374 230 aa10.85□□□□□ -0.67
LIN54-202ENST00000442461 TCN1P20061 433 aaPredicted RBP10.85□□□□□ -0.67
LIN54-202ENST00000442461 ADORA1P30542 326 aa10.85□□□□□ -0.67
LIN54-202ENST00000442461 CCR3P51677 355 aa10.85□□□□□ -0.67
LIN54-202ENST00000442461 NCKAP1LP55160 1127 aa10.85□□□□□ -0.67
LIN54-202ENST00000442461 CYB5R4Q7L1T6 521 aa10.85□□□□□ -0.67
LIN54-202ENST00000442461 ZNF555Q8NEP9 628 aa10.85□□□□□ -0.67
LIN54-202ENST00000442461 SLC10A4Q96EP9 437 aa10.85□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 17.5 ms