RNA–Protein interactions for RNA: ENST00000441602.5

VPS50-205, Transcript of VPS50, EARP/GARPII complex subunit, humanhuman

TSL 1 (best)

Gene VPS50, Length 3,474 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS50-205ENST00000441602 TMCO5BA8MYB1 307 aa6.47□□□□□ -1.37
VPS50-205ENST00000441602 ATP1A1P05023 1023 aaKnown RBP6.47□□□□□ -1.37
VPS50-205ENST00000441602 ZNF865P0CJ78 1059 aaPredicted RBP6.47□□□□□ -1.37
VPS50-205ENST00000441602 ATICP31939 592 aa6.47□□□□□ -1.37
VPS50-205ENST00000441602 CYP2C19P33261 490 aa6.47□□□□□ -1.37
VPS50-205ENST00000441602 PSMC4P43686 418 aa6.47□□□□□ -1.37
VPS50-205ENST00000441602 GALCP54803 685 aa6.47□□□□□ -1.37
VPS50-205ENST00000441602 ELF2Q15723 593 aa6.47□□□□□ -1.37
VPS50-205ENST00000441602 FSCN1Q16658 493 aaKnown RBP6.47□□□□□ -1.37
VPS50-205ENST00000441602 ZNF699Q32M78 642 aa6.47□□□□□ -1.37
VPS50-205ENST00000441602 TAF2Q6P1X5 1199 aa6.47□□□□□ -1.37
VPS50-205ENST00000441602 SEMA4DQ92854 862 aa6.47□□□□□ -1.37
VPS50-205ENST00000441602 ACAP3Q96P50 834 aa6.47□□□□□ -1.37
VPS50-205ENST00000441602 POP1Q99575 1024 aaKnown RBP6.47□□□□□ -1.37
VPS50-205ENST00000441602 GNEQ9Y223 722 aaKnown RBP6.47□□□□□ -1.37
VPS50-205ENST00000441602 PCDHGC5Q9Y5F6 944 aa6.47□□□□□ -1.37
VPS50-205ENST00000441602 GRID2IPA4D2P6 1211 aa6.46□□□□□ -1.37
VPS50-205ENST00000441602 CES2O00748 559 aa6.46□□□□□ -1.37
VPS50-205ENST00000441602 CYP26A1O43174 497 aa6.46□□□□□ -1.37
VPS50-205ENST00000441602 PALMO75781 387 aa6.46□□□□□ -1.37
VPS50-205ENST00000441602 RARBP10826 455 aa6.46□□□□□ -1.37
VPS50-205ENST00000441602 ATF7P17544 494 aaPredicted RBP6.46□□□□□ -1.37
VPS50-205ENST00000441602 PROZP22891 400 aa6.46□□□□□ -1.37
VPS50-205ENST00000441602 MAP9Q49MG5 647 aa6.46□□□□□ -1.37
VPS50-205ENST00000441602 ZNF667Q5HYK9 610 aa6.46□□□□□ -1.37
VPS50-205ENST00000441602 TDRD10Q5VZ19 366 aaKnown RBP6.46□□□□□ -1.37
VPS50-205ENST00000441602 TMCO3Q6UWJ1 677 aa6.46□□□□□ -1.37
VPS50-205ENST00000441602 ZSWIM2Q8NEG5 633 aa6.46□□□□□ -1.37
VPS50-205ENST00000441602 SLC30A5Q8TAD4 765 aa6.46□□□□□ -1.37
VPS50-205ENST00000441602 LNX1Q8TBB1 728 aaPredicted RBP6.46□□□□□ -1.37
VPS50-205ENST00000441602 NAP1L3Q99457 506 aaPredicted RBP6.46□□□□□ -1.37
VPS50-205ENST00000441602 PLVAPQ9BX97 442 aa6.46□□□□□ -1.37
VPS50-205ENST00000441602 TRIM6Q9C030 488 aaPredicted RBP6.46□□□□□ -1.37
VPS50-205ENST00000441602 FAM124BQ9H5Z6 455 aaPredicted RBP6.46□□□□□ -1.37
VPS50-205ENST00000441602 SETD4Q9NVD3 440 aa6.46□□□□□ -1.37
VPS50-205ENST00000441602 AJAP1Q9UKB5 411 aaPredicted RBP6.46□□□□□ -1.37
VPS50-205ENST00000441602 WDR81Q562E7 1941 aa6.46□□□□□ -1.38
VPS50-205ENST00000441602 MIF4GDA9UHW6 222 aaKnown RBP6.46□□□□□ -1.38
VPS50-205ENST00000441602 MED7O43513 233 aa6.46□□□□□ -1.38
VPS50-205ENST00000441602 ECM2O94769 699 aaPredicted RBP6.46□□□□□ -1.38
VPS50-205ENST00000441602 VTNP04004 478 aa6.46□□□□□ -1.38
VPS50-205ENST00000441602 STAG3L1P0CL83 205 aa6.46□□□□□ -1.38
VPS50-205ENST00000441602 TNNC1P63316 161 aa6.46□□□□□ -1.38
VPS50-205ENST00000441602 AMPD2Q01433 879 aa6.46□□□□□ -1.38
VPS50-205ENST00000441602 ITIH3Q06033 890 aa6.46□□□□□ -1.38
VPS50-205ENST00000441602 BRD3Q15059 726 aa6.46□□□□□ -1.38
VPS50-205ENST00000441602 TAF3Q5VWG9 929 aa6.46□□□□□ -1.38
VPS50-205ENST00000441602 LMBRD2Q68DH5 695 aaPredicted RBP6.46□□□□□ -1.38
VPS50-205ENST00000441602 NOTUMQ6P988 496 aa6.46□□□□□ -1.38
VPS50-205ENST00000441602 CRELD2Q6UXH1 353 aaPredicted RBP6.46□□□□□ -1.38
VPS50-205ENST00000441602 UBL4BQ8N7F7 174 aa6.46□□□□□ -1.38
VPS50-205ENST00000441602 ANKRD7Q92527 254 aa6.46□□□□□ -1.38
VPS50-205ENST00000441602 RUBCNQ92622 972 aa6.46□□□□□ -1.38
VPS50-205ENST00000441602 KREMEN1Q96MU8 473 aa6.46□□□□□ -1.38
VPS50-205ENST00000441602 UVRAGQ9P2Y5 699 aa6.46□□□□□ -1.38
VPS50-205ENST00000441602 DERAQ9Y315 318 aa6.46□□□□□ -1.38
VPS50-205ENST00000441602 A0A0U1RQJ8 604 aa6.46□□□□□ -1.38
VPS50-205ENST00000441602 ENC1O14682 589 aa6.46□□□□□ -1.38
VPS50-205ENST00000441602 SGPL1O95470 568 aa6.46□□□□□ -1.38
VPS50-205ENST00000441602 FTLP02792 175 aaPredicted RBP6.46□□□□□ -1.38
VPS50-205ENST00000441602 KRT19P08727 400 aa6.46□□□□□ -1.38
VPS50-205ENST00000441602 PNMA6AP0CW24 399 aaPredicted RBP6.46□□□□□ -1.38
VPS50-205ENST00000441602 CYP11B1P15538 503 aa6.46□□□□□ -1.38
VPS50-205ENST00000441602 GRM5P41594 1212 aa6.46□□□□□ -1.38
VPS50-205ENST00000441602 NSFP46459 744 aaKnown RBP6.46□□□□□ -1.38
VPS50-205ENST00000441602 TMEM132DQ14C87 1099 aa6.46□□□□□ -1.38
VPS50-205ENST00000441602 PPP2R5EQ16537 467 aa6.46□□□□□ -1.38
VPS50-205ENST00000441602 ERCC6LQ2NKX8 1250 aa6.46□□□□□ -1.38
VPS50-205ENST00000441602 PRAMEF19Q5SWL8 479 aa6.46□□□□□ -1.38
VPS50-205ENST00000441602 EEF1DP3Q658K8 133 aa6.46□□□□□ -1.38
VPS50-205ENST00000441602 KIAA0319LQ8IZA0 1049 aa6.46□□□□□ -1.38
VPS50-205ENST00000441602 RBBP8NLQ8NC74 664 aaPredicted RBP6.46□□□□□ -1.38
VPS50-205ENST00000441602 EPS8L1Q8TE68 723 aa6.46□□□□□ -1.38
VPS50-205ENST00000441602 ATRIPQ8WXE1 791 aa6.46□□□□□ -1.38
VPS50-205ENST00000441602 TATDN2Q93075 761 aa6.46□□□□□ -1.38
VPS50-205ENST00000441602 ZNF653Q96CK0 615 aa6.46□□□□□ -1.38
VPS50-205ENST00000441602 OSBPL9Q96SU4 736 aa6.46□□□□□ -1.38
VPS50-205ENST00000441602 ACBD3Q9H3P7 528 aa6.46□□□□□ -1.38
VPS50-205ENST00000441602 PLEKHA5Q9HAU0 1116 aa6.46□□□□□ -1.38
VPS50-205ENST00000441602 CYP3A43Q9HB55 503 aa6.46□□□□□ -1.38
VPS50-205ENST00000441602 GJD2Q9UKL4 321 aa6.46□□□□□ -1.38
VPS50-205ENST00000441602 GTF3C4Q9UKN8 822 aa6.46□□□□□ -1.38
VPS50-205ENST00000441602 CAPN6Q9Y6Q1 641 aa6.46□□□□□ -1.38
VPS50-205ENST00000441602 MROH7Q68CQ1 1323 aa6.45□□□□□ -1.38
VPS50-205ENST00000441602 FAM155AB1AL88 458 aaPredicted RBP6.45□□□□□ -1.38
VPS50-205ENST00000441602 TOMM70O94826 608 aa6.45□□□□□ -1.38
VPS50-205ENST00000441602 ASS1P00966 412 aaKnown RBP6.45□□□□□ -1.38
VPS50-205ENST00000441602 C6orf222P0C671 652 aaPredicted RBP6.45□□□□□ -1.38
VPS50-205ENST00000441602 ABCB4P21439 1286 aa6.45□□□□□ -1.38
VPS50-205ENST00000441602 CETN2P41208 172 aa6.45□□□□□ -1.38
VPS50-205ENST00000441602 RBP5P82980 135 aa6.45□□□□□ -1.38
VPS50-205ENST00000441602 MYO1EQ12965 1108 aa6.45□□□□□ -1.38
VPS50-205ENST00000441602 TCEAL1Q15170 157 aa6.45□□□□□ -1.38
VPS50-205ENST00000441602 DEFB115Q30KQ5 88 aa6.45□□□□□ -1.38
VPS50-205ENST00000441602 ACAD10Q6JQN1 1059 aa6.45□□□□□ -1.38
VPS50-205ENST00000441602 SLC27A1Q6PCB7 646 aa6.45□□□□□ -1.38
VPS50-205ENST00000441602 DAAM2Q86T65 1068 aa6.45□□□□□ -1.38
VPS50-205ENST00000441602 BEST2Q8NFU1 509 aa6.45□□□□□ -1.38
VPS50-205ENST00000441602 TPCN2Q8NHX9 752 aa6.45□□□□□ -1.38
VPS50-205ENST00000441602 ZNF668Q96K58 619 aaPredicted RBP6.45□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 18.6 ms