RNA–Protein interactions for RNA: ENST00000440760.5

SNX17-203, Transcript of sorting nexin 17, humanhuman

TSL 1 (best)

Gene SNX17, Length 1,955 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX17-203ENST00000440760 DHX38Q92620 1227 aaKnown RBP20.59■□□□□ 0.89
SNX17-203ENST00000440760 ARID3AQ99856 593 aa20.59■□□□□ 0.89
SNX17-203ENST00000440760 XRN2Q9H0D6 950 aaKnown RBP eCLIP20.59■□□□□ 0.89
SNX17-203ENST00000440760 UNC93B1Q9H1C4 597 aa20.59■□□□□ 0.89
SNX17-203ENST00000440760 HES2Q9Y543 173 aa20.59■□□□□ 0.89
SNX17-203ENST00000440760 RALGAPA2Q2PPJ7 1873 aa20.59■□□□□ 0.89
SNX17-203ENST00000440760 SSU72P8A0A1W2PR75 194 aa20.59■□□□□ 0.89
SNX17-203ENST00000440760 LACTBL1A8MY62 500 aa20.59■□□□□ 0.89
SNX17-203ENST00000440760 PHACTR2O75167 634 aa20.59■□□□□ 0.89
SNX17-203ENST00000440760 FAM228AQ86W67 206 aa20.59■□□□□ 0.89
SNX17-203ENST00000440760 ZNF592Q92610 1267 aa20.59■□□□□ 0.89
SNX17-203ENST00000440760 IRX2Q9BZI1 471 aaPredicted RBP20.59■□□□□ 0.89
SNX17-203ENST00000440760 NOC2LQ9Y3T9 749 aaKnown RBP20.59■□□□□ 0.89
SNX17-203ENST00000440760 RCCD1A6NED2 376 aa20.58■□□□□ 0.89
SNX17-203ENST00000440760 TMEM191BP0C7N4 346 aa20.58■□□□□ 0.89
SNX17-203ENST00000440760 ARHGAP25P42331 645 aa20.58■□□□□ 0.89
SNX17-203ENST00000440760 JADE1Q6IE81 842 aa20.58■□□□□ 0.89
SNX17-203ENST00000440760 NOTUMQ6P988 496 aa20.58■□□□□ 0.89
SNX17-203ENST00000440760 SLC27A1Q6PCB7 646 aa20.58■□□□□ 0.89
SNX17-203ENST00000440760 TRAPPC11Q7Z392 1133 aa20.58■□□□□ 0.89
SNX17-203ENST00000440760 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP20.58■□□□□ 0.89
SNX17-203ENST00000440760 CXCL16Q9H2A7 254 aa20.58■□□□□ 0.89
SNX17-203ENST00000440760 APOBEC3GQ9HC16 384 aaKnown RBP20.58■□□□□ 0.89
SNX17-203ENST00000440760 C1orf112Q9NSG2 853 aa20.58■□□□□ 0.89
SNX17-203ENST00000440760 TRPV2Q9Y5S1 764 aa20.58■□□□□ 0.89
SNX17-203ENST00000440760 UMODL1Q5DID0 1318 aa20.58■□□□□ 0.89
SNX17-203ENST00000440760 OFD1O75665 1012 aa20.57■□□□□ 0.88
SNX17-203ENST00000440760 IPO7O95373 1038 aaKnown RBP20.57■□□□□ 0.88
SNX17-203ENST00000440760 FERP16591 822 aa20.57■□□□□ 0.88
SNX17-203ENST00000440760 USP8P40818 1118 aa20.57■□□□□ 0.88
SNX17-203ENST00000440760 PRKCIP41743 596 aa20.57■□□□□ 0.88
SNX17-203ENST00000440760 NCOA4Q13772 614 aa20.57■□□□□ 0.88
SNX17-203ENST00000440760 SLC10A6Q3KNW5 377 aa20.57■□□□□ 0.88
SNX17-203ENST00000440760 DCAF4L1Q3SXM0 396 aa20.57■□□□□ 0.88
SNX17-203ENST00000440760 OSBPL7Q9BZF2 842 aa20.57■□□□□ 0.88
SNX17-203ENST00000440760 NXF3Q9H4D5 531 aaKnown RBP20.57■□□□□ 0.88
SNX17-203ENST00000440760 PTPN22Q9Y2R2 807 aa20.57■□□□□ 0.88
SNX17-203ENST00000440760 MROH7Q68CQ1 1323 aa20.57■□□□□ 0.88
SNX17-203ENST00000440760 A0A087X0T9 212 aa20.57■□□□□ 0.88
SNX17-203ENST00000440760 A0A1W2PQ45 241 aaPredicted RBP20.57■□□□□ 0.88
SNX17-203ENST00000440760 A0A1W2PQY0 241 aa20.57■□□□□ 0.88
SNX17-203ENST00000440760 FAM170AA1A519 330 aa20.57■□□□□ 0.88
SNX17-203ENST00000440760 M0QZ92 97 aa20.57■□□□□ 0.88
SNX17-203ENST00000440760 B4GALT4O60513 344 aa20.57■□□□□ 0.88
SNX17-203ENST00000440760 CST3P01034 146 aaPredicted RBP20.57■□□□□ 0.88
SNX17-203ENST00000440760 CHRNA1P02708 482 aa20.57■□□□□ 0.88
SNX17-203ENST00000440760 FAM228BP0C875 321 aa20.57■□□□□ 0.88
SNX17-203ENST00000440760 NCBP1Q09161 790 aaKnown RBP20.57■□□□□ 0.88
SNX17-203ENST00000440760 MTFR1Q15390 333 aa20.57■□□□□ 0.88
SNX17-203ENST00000440760 SURF1Q15526 300 aa20.57■□□□□ 0.88
SNX17-203ENST00000440760 DUOXA2Q1HG44 320 aa20.57■□□□□ 0.88
SNX17-203ENST00000440760 KIAA1328Q86T90 577 aa20.57■□□□□ 0.88
SNX17-203ENST00000440760 GLT1D1Q96MS3 346 aa20.57■□□□□ 0.88
SNX17-203ENST00000440760 SENP6Q9GZR1 1112 aaPredicted RBP20.57■□□□□ 0.88
SNX17-203ENST00000440760 SNTG2Q9NY99 539 aa20.57■□□□□ 0.88
SNX17-203ENST00000440760 ADAMTS1Q9UHI8 967 aa20.57■□□□□ 0.88
SNX17-203ENST00000440760 DAAM1Q9Y4D1 1078 aa20.57■□□□□ 0.88
SNX17-203ENST00000440760 GOLGA6L9A6NEM1 432 aa20.56■□□□□ 0.88
SNX17-203ENST00000440760 MOXD2PA6NHM9 499 aa20.56■□□□□ 0.88
SNX17-203ENST00000440760 FANCGO15287 622 aa20.56■□□□□ 0.88
SNX17-203ENST00000440760 IL18RAPO95256 599 aa20.56■□□□□ 0.88
SNX17-203ENST00000440760 THPOP40225 353 aa20.56■□□□□ 0.88
SNX17-203ENST00000440760 GRM5P41594 1212 aa20.56■□□□□ 0.88
SNX17-203ENST00000440760 MFAP3P55082 362 aa20.56■□□□□ 0.88
SNX17-203ENST00000440760 KRT83P78385 493 aa20.56■□□□□ 0.88
SNX17-203ENST00000440760 SPA17Q15506 151 aa20.56■□□□□ 0.88
SNX17-203ENST00000440760 ARHGAP29Q52LW3 1261 aa20.56■□□□□ 0.88
SNX17-203ENST00000440760 SYT10Q6XYQ8 523 aa20.56■□□□□ 0.88
SNX17-203ENST00000440760 RSPH3Q86UC2 560 aa20.56■□□□□ 0.88
SNX17-203ENST00000440760 OLIG1Q8TAK6 271 aa20.56■□□□□ 0.88
SNX17-203ENST00000440760 APOL6Q9BWW8 343 aa20.56■□□□□ 0.88
SNX17-203ENST00000440760 LACRTQ9GZZ8 138 aa20.56■□□□□ 0.88
SNX17-203ENST00000440760 ACP6Q9NPH0 428 aa20.56■□□□□ 0.88
SNX17-203ENST00000440760 WBP1LQ9NX94 342 aa20.56■□□□□ 0.88
SNX17-203ENST00000440760 CABYRO75952 493 aa20.55■□□□□ 0.88
SNX17-203ENST00000440760 LCA5LO95447 670 aa20.55■□□□□ 0.88
SNX17-203ENST00000440760 GUCY2FP51841 1108 aa20.55■□□□□ 0.88
SNX17-203ENST00000440760 NOP14P78316 857 aaKnown RBP20.55■□□□□ 0.88
SNX17-203ENST00000440760 MGAT3Q09327 533 aa20.55■□□□□ 0.88
SNX17-203ENST00000440760 WDR44Q5JSH3 913 aa20.55■□□□□ 0.88
SNX17-203ENST00000440760 PDZRN4Q6ZMN7 1036 aaPredicted RBP20.55■□□□□ 0.88
SNX17-203ENST00000440760 DNAAF5Q86Y56 855 aa20.55■□□□□ 0.88
SNX17-203ENST00000440760 SHC3Q92529 594 aa20.55■□□□□ 0.88
SNX17-203ENST00000440760 ACAP3Q96P50 834 aa20.55■□□□□ 0.88
SNX17-203ENST00000440760 IFIH1Q9BYX4 1025 aaKnown RBP20.55■□□□□ 0.88
SNX17-203ENST00000440760 TRIM6Q9C030 488 aaPredicted RBP20.55■□□□□ 0.88
SNX17-203ENST00000440760 NOD1Q9Y239 953 aa20.55■□□□□ 0.88
SNX17-203ENST00000440760 NUB1Q9Y5A7 615 aa20.55■□□□□ 0.88
SNX17-203ENST00000440760 ZC3H11AO75152 810 aaKnown RBP eCLIP20.55■□□□□ 0.88
SNX17-203ENST00000440760 AP3M2P53677 418 aa20.55■□□□□ 0.88
SNX17-203ENST00000440760 MYL6P60660 151 aa20.55■□□□□ 0.88
SNX17-203ENST00000440760 PCBP1Q15365 356 aaKnown RBP eCLIP20.55■□□□□ 0.884e-22■■■■■ 62.2
SNX17-203ENST00000440760 SLC20A1Q8WUM9 679 aa20.55■□□□□ 0.88
SNX17-203ENST00000440760 JAKMIP2Q96AA8 810 aa20.55■□□□□ 0.88
SNX17-203ENST00000440760 ANKRD36BP1Q96IX9 119 aa20.55■□□□□ 0.88
SNX17-203ENST00000440760 RNF19AQ9NV58 838 aa20.55■□□□□ 0.88
SNX17-203ENST00000440760 PCDHA13Q9Y5I0 950 aa20.55■□□□□ 0.88
SNX17-203ENST00000440760 TNNC2P02585 160 aa20.54■□□□□ 0.88
SNX17-203ENST00000440760 VAV2P52735 878 aa20.54■□□□□ 0.88
SNX17-203ENST00000440760 SLC18A3Q16572 532 aa20.54■□□□□ 0.88
Retrieved 100 of 20,778 RNA–protein pairs in 84 ms