RNA–Protein interactions for RNA: ENST00000440118.1

SHROOM1-204, Transcript of shroom family member 1, humanhuman

TSL 2

Gene SHROOM1, Length 1,080 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHROOM1-204ENST00000440118 PLCD3Q8N3E9 789 aa21.7■■□□□ 1.06
SHROOM1-204ENST00000440118 KRI1Q8N9T8 703 aaKnown RBP21.7■■□□□ 1.06
SHROOM1-204ENST00000440118 CMASQ8NFW8 434 aaPredicted RBP21.7■■□□□ 1.06
SHROOM1-204ENST00000440118 PIK3R5Q8WYR1 880 aa21.7■■□□□ 1.06
SHROOM1-204ENST00000440118 STAMQ92783 540 aa21.7■■□□□ 1.06
SHROOM1-204ENST00000440118 FAM122AQ96E09 287 aa21.7■■□□□ 1.06
SHROOM1-204ENST00000440118 DDX27Q96GQ7 796 aaKnown RBP21.7■■□□□ 1.06
SHROOM1-204ENST00000440118 EPSTI1Q96J88 318 aa21.7■■□□□ 1.06
SHROOM1-204ENST00000440118 ZBTB45Q96K62 511 aaPredicted RBP21.7■■□□□ 1.06
SHROOM1-204ENST00000440118 CCSER1Q9C0I3 900 aa21.7■■□□□ 1.06
SHROOM1-204ENST00000440118 ZSCAN16Q9H4T2 348 aaPredicted RBP21.7■■□□□ 1.06
SHROOM1-204ENST00000440118 BLOC1S4Q9NUP1 217 aa21.7■■□□□ 1.06
SHROOM1-204ENST00000440118 MTMR6Q9Y217 621 aa21.7■■□□□ 1.06
SHROOM1-204ENST00000440118 USTQ9Y2C2 406 aa21.7■■□□□ 1.06
SHROOM1-204ENST00000440118 NUB1Q9Y5A7 615 aa21.7■■□□□ 1.06
SHROOM1-204ENST00000440118 TMEM189-UBE2V1I3L0A0 370 aa21.69■■□□□ 1.06
SHROOM1-204ENST00000440118 RFPL2O75678 378 aa21.69■■□□□ 1.06
SHROOM1-204ENST00000440118 SCP2P22307 547 aa21.69■■□□□ 1.06
SHROOM1-204ENST00000440118 SIGLEC14Q08ET2 396 aa21.69■■□□□ 1.06
SHROOM1-204ENST00000440118 PTPAQ15257 358 aa21.69■■□□□ 1.06
SHROOM1-204ENST00000440118 UPP1Q16831 310 aa21.69■■□□□ 1.06
SHROOM1-204ENST00000440118 SEZ6Q53EL9 994 aa21.69■■□□□ 1.06
SHROOM1-204ENST00000440118 SUGP1Q8IWZ8 645 aaKnown RBP21.69■■□□□ 1.06
SHROOM1-204ENST00000440118 KREMEN2Q8NCW0 462 aa21.69■■□□□ 1.06
SHROOM1-204ENST00000440118 HDAC7Q8WUI4 952 aa21.69■■□□□ 1.06
SHROOM1-204ENST00000440118 PBXIP1Q96AQ6 731 aa21.69■■□□□ 1.06
SHROOM1-204ENST00000440118 STK17AQ9UEE5 414 aa21.69■■□□□ 1.06
SHROOM1-204ENST00000440118 SORCS3Q9UPU3 1222 aa21.69■■□□□ 1.06
SHROOM1-204ENST00000440118 PODXLO00592 558 aa21.68■■□□□ 1.06
SHROOM1-204ENST00000440118 TRAK2O60296 914 aa21.68■■□□□ 1.06
SHROOM1-204ENST00000440118 GBP2P32456 591 aaPredicted RBP21.68■■□□□ 1.06
SHROOM1-204ENST00000440118 ABCD1P33897 745 aa21.68■■□□□ 1.06
SHROOM1-204ENST00000440118 RRAGBQ5VZM2 374 aa21.68■■□□□ 1.06
SHROOM1-204ENST00000440118 CYP26C1Q6V0L0 522 aa21.68■■□□□ 1.06
SHROOM1-204ENST00000440118 LRRC15Q8TF66 581 aa21.68■■□□□ 1.06
SHROOM1-204ENST00000440118 CNTN3Q9P232 1028 aa21.68■■□□□ 1.06
SHROOM1-204ENST00000440118 FBXO2Q9UK22 296 aaPredicted RBP21.68■■□□□ 1.06
SHROOM1-204ENST00000440118 TBX20Q9UMR3 447 aa21.68■■□□□ 1.06
SHROOM1-204ENST00000440118 SRPRBQ9Y5M8 271 aaKnown RBP21.68■■□□□ 1.06
SHROOM1-204ENST00000440118 CLUHO75153 1309 aa21.67■■□□□ 1.06
SHROOM1-204ENST00000440118 I3L4J1 428 aa21.67■■□□□ 1.06
SHROOM1-204ENST00000440118 ABLIM1O14639 778 aa21.67■■□□□ 1.06
SHROOM1-204ENST00000440118 C1RP00736 705 aa21.67■■□□□ 1.06
SHROOM1-204ENST00000440118 ASGR2P07307 311 aa21.67■■□□□ 1.06
SHROOM1-204ENST00000440118 CXCL8P10145 99 aa21.67■■□□□ 1.06
SHROOM1-204ENST00000440118 KCNE1P15382 129 aa21.67■■□□□ 1.06
SHROOM1-204ENST00000440118 PPP2R3AQ06190 1150 aa21.67■■□□□ 1.06
SHROOM1-204ENST00000440118 SOX4Q06945 474 aaPredicted RBP21.67■■□□□ 1.06
SHROOM1-204ENST00000440118 MCL1Q07820 350 aa21.67■■□□□ 1.06
SHROOM1-204ENST00000440118 STK38Q15208 465 aa21.67■■□□□ 1.06
SHROOM1-204ENST00000440118 ZDHHC14Q8IZN3 488 aa21.67■■□□□ 1.06
SHROOM1-204ENST00000440118 LNX1Q8TBB1 728 aaPredicted RBP21.67■■□□□ 1.06
SHROOM1-204ENST00000440118 FEZF2Q8TBJ5 459 aa21.67■■□□□ 1.06
SHROOM1-204ENST00000440118 CLIC6Q96NY7 704 aa21.67■■□□□ 1.06
SHROOM1-204ENST00000440118 ZDHHC7Q9NXF8 308 aa21.67■■□□□ 1.06
SHROOM1-204ENST00000440118 LIMD1Q9UGP4 676 aa21.67■■□□□ 1.06
SHROOM1-204ENST00000440118 MUC6Q6W4X9 2439 aa21.66■■□□□ 1.06
SHROOM1-204ENST00000440118 CLTAP09496 248 aa21.66■■□□□ 1.06
SHROOM1-204ENST00000440118 TKTP29401 623 aaKnown RBP21.66■■□□□ 1.06
SHROOM1-204ENST00000440118 DDIT3P35638 169 aa21.66■■□□□ 1.06
SHROOM1-204ENST00000440118 BRCC3P46736 316 aa21.66■■□□□ 1.06
SHROOM1-204ENST00000440118 ZNF131P52739 623 aa21.66■■□□□ 1.06
SHROOM1-204ENST00000440118 KYAT1Q16773 422 aa21.66■■□□□ 1.06
SHROOM1-204ENST00000440118 XKR4Q5GH76 650 aa21.66■■□□□ 1.06
SHROOM1-204ENST00000440118 ALKAL1Q6UXT8 129 aa21.66■■□□□ 1.06
SHROOM1-204ENST00000440118 USP49Q70CQ1 688 aa21.66■■□□□ 1.06
SHROOM1-204ENST00000440118 DYMQ7RTS9 669 aa21.66■■□□□ 1.06
SHROOM1-204ENST00000440118 UBALD2Q8IYN6 164 aa21.66■■□□□ 1.06
SHROOM1-204ENST00000440118 C18orf25Q96B23 403 aaPredicted RBP21.66■■□□□ 1.06
SHROOM1-204ENST00000440118 ZMAT2Q96NC0 199 aaKnown RBP21.66■■□□□ 1.06
SHROOM1-204ENST00000440118 USP28Q96RU2 1077 aa21.66■■□□□ 1.06
SHROOM1-204ENST00000440118 FBXW11Q9UKB1 542 aa21.66■■□□□ 1.06
SHROOM1-204ENST00000440118 ZDBF2Q9HCK1 2354 aa21.66■■□□□ 1.06
SHROOM1-204ENST00000440118 ZNF318Q5VUA4 2279 aa21.66■■□□□ 1.06
SHROOM1-204ENST00000440118 FGFR3P22607 806 aa21.65■■□□□ 1.06
SHROOM1-204ENST00000440118 RPL9P32969 192 aaKnown RBP21.65■■□□□ 1.06
SHROOM1-204ENST00000440118 MCM4P33991 863 aa21.65■■□□□ 1.06
SHROOM1-204ENST00000440118 PLA2G5P39877 138 aa21.65■■□□□ 1.06
SHROOM1-204ENST00000440118 STAT6P42226 847 aa21.65■■□□□ 1.06
SHROOM1-204ENST00000440118 PPM1LQ5SGD2 360 aa21.65■■□□□ 1.06
SHROOM1-204ENST00000440118 CCDC73Q6ZRK6 1079 aa21.65■■□□□ 1.06
SHROOM1-204ENST00000440118 ANKS3Q6ZW76 656 aa21.65■■□□□ 1.06
SHROOM1-204ENST00000440118 C3orf58Q8NDZ4 430 aa21.65■■□□□ 1.06
SHROOM1-204ENST00000440118 SNX21Q969T3 373 aa21.65■■□□□ 1.06
SHROOM1-204ENST00000440118 ZNF396Q96N95 335 aaPredicted RBP21.65■■□□□ 1.06
SHROOM1-204ENST00000440118 CLSTN3Q9BQT9 956 aa21.65■■□□□ 1.06
SHROOM1-204ENST00000440118 MSTO1Q9BUK6 570 aa21.65■■□□□ 1.06
SHROOM1-204ENST00000440118 WDR6Q9NNW5 1121 aaKnown RBP21.65■■□□□ 1.06
SHROOM1-204ENST00000440118 POLIQ9UNA4 740 aa21.65■■□□□ 1.06
SHROOM1-204ENST00000440118 CDY1Q9Y6F8 540 aa21.65■■□□□ 1.06
SHROOM1-204ENST00000440118 ZMYND10O75800 440 aa21.64■■□□□ 1.05
SHROOM1-204ENST00000440118 C8AP07357 584 aa21.64■■□□□ 1.05
SHROOM1-204ENST00000440118 NMT1P30419 496 aaKnown RBP21.64■■□□□ 1.05
SHROOM1-204ENST00000440118 OR1D2P34982 312 aa21.64■■□□□ 1.05
SHROOM1-204ENST00000440118 SLC10A6Q3KNW5 377 aa21.64■■□□□ 1.05
SHROOM1-204ENST00000440118 SV2BQ7L1I2 683 aa21.64■■□□□ 1.05
SHROOM1-204ENST00000440118 GET4Q7L5D6 327 aaPredicted RBP21.64■■□□□ 1.05
SHROOM1-204ENST00000440118 FAM212AQ96EL1 285 aa21.64■■□□□ 1.05
SHROOM1-204ENST00000440118 KIF12Q96FN5 646 aa21.64■■□□□ 1.05
SHROOM1-204ENST00000440118 PRKD2Q9BZL6 878 aa21.64■■□□□ 1.05
Retrieved 100 of 20,778 RNA–protein pairs in 22.6 ms