RNA–Protein interactions for RNA: ENST00000439775.1

SNRPD3-204, Transcript of small nuclear ribonucleoprotein D3 polypeptide, humanhuman

TSL 3

Gene SNRPD3, Length 640 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPD3-204ENST00000439775 SMOC2Q9H3U7 446 aa17.82■□□□□ 0.44
SNRPD3-204ENST00000439775 GOLGA2P5Q9HBQ8 144 aa17.82■□□□□ 0.44
SNRPD3-204ENST00000439775 IGSF9Q9P2J2 1179 aa17.82■□□□□ 0.44
SNRPD3-204ENST00000439775 EPS15L1Q9UBC2 864 aa17.82■□□□□ 0.44
SNRPD3-204ENST00000439775 ZDBF2Q9HCK1 2354 aa17.81■□□□□ 0.44
SNRPD3-204ENST00000439775 HOXA9P31269 272 aa17.81■□□□□ 0.44
SNRPD3-204ENST00000439775 VCPP55072 806 aaKnown RBP17.81■□□□□ 0.44
SNRPD3-204ENST00000439775 NCKAP1LP55160 1127 aa17.81■□□□□ 0.44
SNRPD3-204ENST00000439775 SOX4Q06945 474 aaPredicted RBP17.81■□□□□ 0.44
SNRPD3-204ENST00000439775 TDGQ13569 410 aa17.81■□□□□ 0.44
SNRPD3-204ENST00000439775 SF3A1Q15459 793 aaKnown RBP17.81■□□□□ 0.44
SNRPD3-204ENST00000439775 IER5LQ5T953 404 aa17.81■□□□□ 0.44
SNRPD3-204ENST00000439775 LIN9Q5TKA1 542 aa17.81■□□□□ 0.44
SNRPD3-204ENST00000439775 C3orf58Q8NDZ4 430 aa17.81■□□□□ 0.44
SNRPD3-204ENST00000439775 PRSS33Q8NF86 280 aa17.81■□□□□ 0.44
SNRPD3-204ENST00000439775 ZMAT2Q96NC0 199 aaKnown RBP17.81■□□□□ 0.44
SNRPD3-204ENST00000439775 KCNK12Q9HB15 430 aa17.81■□□□□ 0.44
SNRPD3-204ENST00000439775 PIDD1Q9HB75 910 aa17.81■□□□□ 0.44
SNRPD3-204ENST00000439775 ANKFY1Q9P2R3 1169 aa17.81■□□□□ 0.44
SNRPD3-204ENST00000439775 MTRRQ9UBK8 725 aa17.81■□□□□ 0.44
SNRPD3-204ENST00000439775 VWA8A3KMH1 1905 aa17.8■□□□□ 0.44
SNRPD3-204ENST00000439775 NPHP3-ACAD11A0A0J9YXS1 232 aa17.8■□□□□ 0.44
SNRPD3-204ENST00000439775 VPS37CA5D8V6 355 aaPredicted RBP17.8■□□□□ 0.44
SNRPD3-204ENST00000439775 PDGFBP01127 241 aaPredicted RBP17.8■□□□□ 0.44
SNRPD3-204ENST00000439775 POU2F2P09086 479 aa17.8■□□□□ 0.44
SNRPD3-204ENST00000439775 HNRNPA1P09651 372 aaKnown RBP eCLIP17.8■□□□□ 0.44
SNRPD3-204ENST00000439775 IGFBP6P24592 240 aaPredicted RBP17.8■□□□□ 0.44
SNRPD3-204ENST00000439775 AVPR2P30518 371 aa17.8■□□□□ 0.44
SNRPD3-204ENST00000439775 GBP2P32456 591 aaPredicted RBP17.8■□□□□ 0.44
SNRPD3-204ENST00000439775 ZNF131P52739 623 aa17.8■□□□□ 0.44
SNRPD3-204ENST00000439775 NUBP1P53384 320 aa17.8■□□□□ 0.44
SNRPD3-204ENST00000439775 PTPN5P54829 565 aa17.8■□□□□ 0.44
SNRPD3-204ENST00000439775 MCL1Q07820 350 aa17.8■□□□□ 0.44
SNRPD3-204ENST00000439775 RAB33AQ14088 237 aa17.8■□□□□ 0.44
SNRPD3-204ENST00000439775 ANKS3Q6ZW76 656 aa17.8■□□□□ 0.44
SNRPD3-204ENST00000439775 LRRC15Q8TF66 581 aa17.8■□□□□ 0.44
SNRPD3-204ENST00000439775 ZBTB45Q96K62 511 aaPredicted RBP17.8■□□□□ 0.44
SNRPD3-204ENST00000439775 REEP2Q9BRK0 252 aa17.8■□□□□ 0.44
SNRPD3-204ENST00000439775 BLOC1S4Q9NUP1 217 aa17.8■□□□□ 0.44
SNRPD3-204ENST00000439775 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP17.8■□□□□ 0.447e-7■■■□□ 15.1
SNRPD3-204ENST00000439775 DUSP12Q9UNI6 340 aa17.8■□□□□ 0.44
SNRPD3-204ENST00000439775 BACE2Q9Y5Z0 518 aa17.8■□□□□ 0.44
SNRPD3-204ENST00000439775 MTCL1Q9Y4B5 1905 aaKnown RBP17.8■□□□□ 0.44
SNRPD3-204ENST00000439775 PIEZO1Q92508 2521 aa17.79■□□□□ 0.44
SNRPD3-204ENST00000439775 PODXLO00592 558 aa17.79■□□□□ 0.44
SNRPD3-204ENST00000439775 CLDN3O15551 220 aa17.79■□□□□ 0.44
SNRPD3-204ENST00000439775 MEFVO15553 781 aaPredicted RBP17.79■□□□□ 0.44
SNRPD3-204ENST00000439775 ADAM12O43184 909 aa17.79■□□□□ 0.44
SNRPD3-204ENST00000439775 C8AP07357 584 aa17.79■□□□□ 0.44
SNRPD3-204ENST00000439775 HARSP12081 509 aaKnown RBP17.79■□□□□ 0.44
SNRPD3-204ENST00000439775 PLCG1P19174 1290 aa17.79■□□□□ 0.44
SNRPD3-204ENST00000439775 TKTP29401 623 aaKnown RBP17.79■□□□□ 0.44
SNRPD3-204ENST00000439775 RPL9P32969 192 aaKnown RBP17.79■□□□□ 0.44
SNRPD3-204ENST00000439775 CACNB1Q02641 598 aaPredicted RBP17.79■□□□□ 0.44
SNRPD3-204ENST00000439775 GRIN1Q05586 938 aa17.79■□□□□ 0.44
SNRPD3-204ENST00000439775 RTL10Q7L3V2 364 aa17.79■□□□□ 0.44
SNRPD3-204ENST00000439775 GPBP1Q86WP2 473 aa17.79■□□□□ 0.44
SNRPD3-204ENST00000439775 RAD54LQ92698 747 aa17.79■□□□□ 0.44
SNRPD3-204ENST00000439775 NXPE3Q969Y0 559 aa17.79■□□□□ 0.44
SNRPD3-204ENST00000439775 MYADMQ96S97 322 aa17.79■□□□□ 0.44
SNRPD3-204ENST00000439775 OR1D2P34982 312 aa17.78■□□□□ 0.44
SNRPD3-204ENST00000439775 KARSQ15046 597 aaKnown RBP17.78■□□□□ 0.44
SNRPD3-204ENST00000439775 SLC10A6Q3KNW5 377 aa17.78■□□□□ 0.44
SNRPD3-204ENST00000439775 PPM1LQ5SGD2 360 aa17.78■□□□□ 0.44
SNRPD3-204ENST00000439775 HAUS6Q7Z4H7 955 aa17.78■□□□□ 0.44
SNRPD3-204ENST00000439775 RASSF8Q8NHQ8 419 aa17.78■□□□□ 0.44
SNRPD3-204ENST00000439775 CCSER1Q9C0I3 900 aa17.78■□□□□ 0.44
SNRPD3-204ENST00000439775 PLEKHA5Q9HAU0 1116 aa17.78■□□□□ 0.44
SNRPD3-204ENST00000439775 PARVGQ9HBI0 331 aa17.78■□□□□ 0.44
SNRPD3-204ENST00000439775 GTF3C5Q9Y5Q8 519 aaPredicted RBP17.78■□□□□ 0.44
SNRPD3-204ENST00000439775 CDY1Q9Y6F8 540 aa17.78■□□□□ 0.44
SNRPD3-204ENST00000439775 I3L4J1 428 aa17.77■□□□□ 0.44
SNRPD3-204ENST00000439775 SYN3O14994 580 aa17.77■□□□□ 0.44
SNRPD3-204ENST00000439775 XYLBO75191 536 aa17.77■□□□□ 0.44
SNRPD3-204ENST00000439775 PIGRP01833 764 aa17.77■□□□□ 0.44
SNRPD3-204ENST00000439775 ABCD1P33897 745 aa17.77■□□□□ 0.44
SNRPD3-204ENST00000439775 BRCC3P46736 316 aa17.77■□□□□ 0.44
SNRPD3-204ENST00000439775 TCF15Q12870 199 aa17.77■□□□□ 0.44
SNRPD3-204ENST00000439775 PTPAQ15257 358 aa17.77■□□□□ 0.44
SNRPD3-204ENST00000439775 KYAT1Q16773 422 aa17.77■□□□□ 0.44
SNRPD3-204ENST00000439775 UVSSAQ2YD98 709 aa17.77■□□□□ 0.44
SNRPD3-204ENST00000439775 AXDND1Q5T1B0 1012 aaPredicted RBP17.77■□□□□ 0.44
SNRPD3-204ENST00000439775 SLC8B1Q6J4K2 584 aa17.77■□□□□ 0.44
SNRPD3-204ENST00000439775 RSPO2Q6UXX9 243 aaPredicted RBP17.77■□□□□ 0.44
SNRPD3-204ENST00000439775 GET4Q7L5D6 327 aaPredicted RBP17.77■□□□□ 0.44
SNRPD3-204ENST00000439775 SLC7A14Q8TBB6 771 aa17.77■□□□□ 0.44
SNRPD3-204ENST00000439775 LARP4BQ92615 738 aaKnown RBP17.77■□□□□ 0.44
SNRPD3-204ENST00000439775 C18orf25Q96B23 403 aaPredicted RBP17.77■□□□□ 0.44
SNRPD3-204ENST00000439775 BICD1Q96G01 975 aa17.77■□□□□ 0.44
SNRPD3-204ENST00000439775 INTS4Q96HW7 963 aaKnown RBP17.77■□□□□ 0.44
SNRPD3-204ENST00000439775 ZFP37Q9Y6Q3 630 aaPredicted RBP17.77■□□□□ 0.44
SNRPD3-204ENST00000439775 MYH11P35749 1972 aa17.77■□□□□ 0.43
SNRPD3-204ENST00000439775 K7ENM7 598 aa17.76■□□□□ 0.43
SNRPD3-204ENST00000439775 HNRNPDLO14979 420 aaKnown RBP17.76■□□□□ 0.43
SNRPD3-204ENST00000439775 FAM13AO94988 1023 aa17.76■□□□□ 0.43
SNRPD3-204ENST00000439775 CLTAP09496 248 aa17.76■□□□□ 0.43
SNRPD3-204ENST00000439775 CXCL8P10145 99 aa17.76■□□□□ 0.43
SNRPD3-204ENST00000439775 LAMP2P13473 410 aa17.76■□□□□ 0.43
SNRPD3-204ENST00000439775 SYT1P21579 422 aa17.76■□□□□ 0.43
SNRPD3-204ENST00000439775 FSHRP23945 695 aa17.76■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms