RNA–Protein interactions for RNA: ENST00000439681.1

UBR3-205, Transcript of ubiquitin protein ligase E3 component n-recognin 3, humanhuman

TSL 2

Gene UBR3, Length 2,183 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR3-205ENST00000439681 GAD1Q99259 594 aa8.11□□□□□ -1.11
UBR3-205ENST00000439681 TMEM161AQ9NX61 479 aa8.11□□□□□ -1.11
UBR3-205ENST00000439681 PLAGL2Q9UPG8 496 aa8.11□□□□□ -1.11
UBR3-205ENST00000439681 ARL5CA6NH57 179 aa8.1□□□□□ -1.11
UBR3-205ENST00000439681 FGFR1P11362 822 aa8.1□□□□□ -1.11
UBR3-205ENST00000439681 TNNI1P19237 187 aa8.1□□□□□ -1.11
UBR3-205ENST00000439681 IBSPP21815 317 aaPredicted RBP8.1□□□□□ -1.11
UBR3-205ENST00000439681 PBX1P40424 430 aa8.1□□□□□ -1.11
UBR3-205ENST00000439681 KCNMA1Q12791 1236 aa8.1□□□□□ -1.11
UBR3-205ENST00000439681 NAB2Q15742 525 aa8.1□□□□□ -1.11
UBR3-205ENST00000439681 PTPN21Q16825 1174 aa8.1□□□□□ -1.11
UBR3-205ENST00000439681 DUOXA2Q1HG44 320 aa8.1□□□□□ -1.11
UBR3-205ENST00000439681 ZACNQ401N2 412 aa8.1□□□□□ -1.11
UBR3-205ENST00000439681 CLLU1OSQ5K130 101 aa8.1□□□□□ -1.11
UBR3-205ENST00000439681 TMEM240Q5SV17 173 aa8.1□□□□□ -1.11
UBR3-205ENST00000439681 DPY19L2P1Q6NXN4 242 aa8.1□□□□□ -1.11
UBR3-205ENST00000439681 HACE1Q8IYU2 909 aa8.1□□□□□ -1.11
UBR3-205ENST00000439681 TRIM5Q9C035 493 aa8.1□□□□□ -1.11
UBR3-205ENST00000439681 RSAD1Q9HA92 442 aa8.1□□□□□ -1.11
UBR3-205ENST00000439681 TMEM8AQ9HCN3 771 aa8.1□□□□□ -1.11
UBR3-205ENST00000439681 UBN1Q9NPG3 1134 aa8.1□□□□□ -1.11
UBR3-205ENST00000439681 DERAQ9Y315 318 aa8.1□□□□□ -1.11
UBR3-205ENST00000439681 C2CD2Q9Y426 696 aa8.1□□□□□ -1.11
UBR3-205ENST00000439681 STX10O60499 249 aa8.1□□□□□ -1.11
UBR3-205ENST00000439681 LRRN2O75325 713 aa8.1□□□□□ -1.11
UBR3-205ENST00000439681 VNN1O95497 513 aa8.1□□□□□ -1.11
UBR3-205ENST00000439681 ADCY5O95622 1261 aa8.1□□□□□ -1.11
UBR3-205ENST00000439681 CST3P01034 146 aaPredicted RBP8.1□□□□□ -1.11
UBR3-205ENST00000439681 FGBP02675 491 aa8.1□□□□□ -1.11
UBR3-205ENST00000439681 MLH1P40692 756 aa8.1□□□□□ -1.11
UBR3-205ENST00000439681 WDR5P61964 334 aaKnown RBP8.1□□□□□ -1.11
UBR3-205ENST00000439681 TFAMQ00059 246 aaKnown RBP8.1□□□□□ -1.11
UBR3-205ENST00000439681 UBXN1Q04323 297 aa8.1□□□□□ -1.11
UBR3-205ENST00000439681 TMEM132DQ14C87 1099 aa8.1□□□□□ -1.11
UBR3-205ENST00000439681 FILIP1LQ4L180 1135 aa8.1□□□□□ -1.11
UBR3-205ENST00000439681 GLRA4Q5JXX5 417 aa8.1□□□□□ -1.11
UBR3-205ENST00000439681 TDRD10Q5VZ19 366 aaKnown RBP8.1□□□□□ -1.11
UBR3-205ENST00000439681 KRT39Q6A163 491 aa8.1□□□□□ -1.11
UBR3-205ENST00000439681 OTOP2Q7RTS6 562 aa8.1□□□□□ -1.11
UBR3-205ENST00000439681 TRAPPC11Q7Z392 1133 aa8.1□□□□□ -1.11
UBR3-205ENST00000439681 USP37Q86T82 979 aa8.1□□□□□ -1.11
UBR3-205ENST00000439681 LMO3Q8TAP4 145 aa8.1□□□□□ -1.11
UBR3-205ENST00000439681 SEMA4DQ92854 862 aa8.1□□□□□ -1.11
UBR3-205ENST00000439681 C18orf25Q96B23 403 aaPredicted RBP8.1□□□□□ -1.11
UBR3-205ENST00000439681 KIF12Q96FN5 646 aa8.1□□□□□ -1.11
UBR3-205ENST00000439681 PPP1R10Q96QC0 940 aaKnown RBP8.1□□□□□ -1.11
UBR3-205ENST00000439681 TSPAN18Q96SJ8 248 aa8.1□□□□□ -1.11
UBR3-205ENST00000439681 BUD13Q9BRD0 619 aaKnown RBP eCLIP8.1□□□□□ -1.11
UBR3-205ENST00000439681 MTMR12Q9C0I1 747 aa8.1□□□□□ -1.11
UBR3-205ENST00000439681 MMRN2Q9H8L6 949 aa8.1□□□□□ -1.11
UBR3-205ENST00000439681 COQ4Q9Y3A0 265 aa8.1□□□□□ -1.11
UBR3-205ENST00000439681 PCDHB7Q9Y5E2 793 aa8.1□□□□□ -1.11
UBR3-205ENST00000439681 GTPBP10A4D1E9 387 aaKnown RBP8.09□□□□□ -1.11
UBR3-205ENST00000439681 PES1O00541 588 aaKnown RBP8.09□□□□□ -1.11
UBR3-205ENST00000439681 P4HA2O15460 535 aa8.09□□□□□ -1.11
UBR3-205ENST00000439681 CBFA2T2O43439 604 aa8.09□□□□□ -1.11
UBR3-205ENST00000439681 BAIAP3O94812 1187 aa8.09□□□□□ -1.11
UBR3-205ENST00000439681 TPM2P07951 284 aa8.09□□□□□ -1.11
UBR3-205ENST00000439681 KLK7P49862 253 aa8.09□□□□□ -1.11
UBR3-205ENST00000439681 GATMP50440 423 aa8.09□□□□□ -1.11
UBR3-205ENST00000439681 SCNN1GP51170 649 aa8.09□□□□□ -1.11
UBR3-205ENST00000439681 GUCY2FP51841 1108 aa8.09□□□□□ -1.11
UBR3-205ENST00000439681 AP3M2P53677 418 aa8.09□□□□□ -1.11
UBR3-205ENST00000439681 DEFB103AP81534 67 aa8.09□□□□□ -1.11
UBR3-205ENST00000439681 SOX4Q06945 474 aaPredicted RBP8.09□□□□□ -1.11
UBR3-205ENST00000439681 EPC2Q52LR7 807 aa8.09□□□□□ -1.11
UBR3-205ENST00000439681 NT5DC4Q86YG4 428 aa8.09□□□□□ -1.11
UBR3-205ENST00000439681 NPAS4Q8IUM7 802 aa8.09□□□□□ -1.11
UBR3-205ENST00000439681 C1orf127Q8N9H9 656 aa8.09□□□□□ -1.11
UBR3-205ENST00000439681 EHBP1Q8NDI1 1231 aa8.09□□□□□ -1.11
UBR3-205ENST00000439681 HELQQ8TDG4 1101 aa8.09□□□□□ -1.11
UBR3-205ENST00000439681 TAS1R2Q8TE23 839 aa8.09□□□□□ -1.11
UBR3-205ENST00000439681 TOP1MTQ969P6 601 aa8.09□□□□□ -1.11
UBR3-205ENST00000439681 MRFAP1L1Q96HT8 127 aa8.09□□□□□ -1.11
UBR3-205ENST00000439681 CASD1Q96PB1 797 aa8.09□□□□□ -1.11
UBR3-205ENST00000439681 ERGIC2Q96RQ1 377 aa8.09□□□□□ -1.11
UBR3-205ENST00000439681 CRACR2AQ9BSW2 395 aa8.09□□□□□ -1.11
UBR3-205ENST00000439681 TUBGCP4Q9UGJ1 667 aa8.09□□□□□ -1.11
UBR3-205ENST00000439681 SIX4Q9UIU6 781 aa8.09□□□□□ -1.11
UBR3-205ENST00000439681 SIK3Q9Y2K2 1263 aa8.09□□□□□ -1.11
UBR3-205ENST00000439681 A0A1W2PQC6 194 aa8.08□□□□□ -1.12
UBR3-205ENST00000439681 EFCAB14O75071 495 aa8.08□□□□□ -1.12
UBR3-205ENST00000439681 SLC9A1P19634 815 aa8.08□□□□□ -1.12
UBR3-205ENST00000439681 PON1P27169 355 aa8.08□□□□□ -1.12
UBR3-205ENST00000439681 MXI1P50539 228 aa8.08□□□□□ -1.12
UBR3-205ENST00000439681 MYL7Q01449 175 aa8.08□□□□□ -1.12
UBR3-205ENST00000439681 APBA1Q02410 837 aa8.08□□□□□ -1.12
UBR3-205ENST00000439681 SYCP1Q15431 976 aa8.08□□□□□ -1.12
UBR3-205ENST00000439681 NOMO2Q5JPE7 1267 aa8.08□□□□□ -1.12
UBR3-205ENST00000439681 FKBP15Q5T1M5 1219 aa8.08□□□□□ -1.12
UBR3-205ENST00000439681 GLB1LQ6UWU2 654 aa8.08□□□□□ -1.12
UBR3-205ENST00000439681 TMCO2Q7Z6W1 182 aaPredicted RBP8.08□□□□□ -1.12
UBR3-205ENST00000439681 CACTINQ8WUQ7 758 aaKnown RBP8.08□□□□□ -1.12
UBR3-205ENST00000439681 HERVK_113Q902F9 699 aa8.08□□□□□ -1.12
UBR3-205ENST00000439681 DPP3Q9NY33 737 aa8.08□□□□□ -1.12
UBR3-205ENST00000439681 CXXC1Q9P0U4 656 aaPredicted RBP8.08□□□□□ -1.12
UBR3-205ENST00000439681 NR2E3Q9Y5X4 410 aa8.08□□□□□ -1.12
UBR3-205ENST00000439681 ANO9A1A5B4 782 aa8.08□□□□□ -1.12
UBR3-205ENST00000439681 N4BP1O75113 896 aaKnown RBP8.08□□□□□ -1.12
UBR3-205ENST00000439681 DGKIO75912 1065 aa8.08□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 22.4 ms