RNA–Protein interactions for RNA: ENST00000439374.6

CDC42SE1-202, Transcript of CDC42 small effector 1, humanhuman

APPRIS P1 TSL 5 BASIC

Gene CDC42SE1, Length 3,498 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42SE1-202ENST00000439374 UBN1Q9NPG3 1134 aa10.58□□□□□ -0.72
CDC42SE1-202ENST00000439374 MARCOQ9UEW3 520 aaPredicted RBP10.58□□□□□ -0.72
CDC42SE1-202ENST00000439374 PJA2O43164 708 aa10.58□□□□□ -0.72
CDC42SE1-202ENST00000439374 SNX3O60493 162 aa10.58□□□□□ -0.72
CDC42SE1-202ENST00000439374 PYGMP11217 842 aa10.58□□□□□ -0.72
CDC42SE1-202ENST00000439374 CD58P19256 250 aa10.58□□□□□ -0.72
CDC42SE1-202ENST00000439374 ABL2P42684 1182 aa10.58□□□□□ -0.72
CDC42SE1-202ENST00000439374 QARSP47897 775 aaKnown RBP10.58□□□□□ -0.72
CDC42SE1-202ENST00000439374 KRT17Q04695 432 aa10.58□□□□□ -0.72
CDC42SE1-202ENST00000439374 Q4G0T1 1027 aa10.58□□□□□ -0.72
CDC42SE1-202ENST00000439374 RSBN1LQ6PCB5 846 aaPredicted RBP10.58□□□□□ -0.72
CDC42SE1-202ENST00000439374 SLC30A9Q6PML9 568 aa10.58□□□□□ -0.72
CDC42SE1-202ENST00000439374 RNF207Q6ZRF8 634 aa10.58□□□□□ -0.72
CDC42SE1-202ENST00000439374 TMEM143Q96AN5 459 aa10.58□□□□□ -0.72
CDC42SE1-202ENST00000439374 MCUR1Q96AQ8 359 aa10.58□□□□□ -0.72
CDC42SE1-202ENST00000439374 ATG4CQ96DT6 458 aa10.58□□□□□ -0.72
CDC42SE1-202ENST00000439374 GMCL1Q96IK5 515 aa10.58□□□□□ -0.72
CDC42SE1-202ENST00000439374 ACCSQ96QU6 501 aa10.58□□□□□ -0.72
CDC42SE1-202ENST00000439374 AGPAT1Q99943 283 aa10.58□□□□□ -0.72
CDC42SE1-202ENST00000439374 CNOT10Q9H9A5 744 aaKnown RBP10.58□□□□□ -0.72
CDC42SE1-202ENST00000439374 HMGCS2P54868 508 aa10.57□□□□□ -0.72
CDC42SE1-202ENST00000439374 MPP2Q14168 576 aa10.57□□□□□ -0.72
CDC42SE1-202ENST00000439374 UGCGQ16739 394 aa10.57□□□□□ -0.72
CDC42SE1-202ENST00000439374 ZBTB33Q86T24 672 aa10.57□□□□□ -0.72
CDC42SE1-202ENST00000439374 VPS52Q8N1B4 723 aa10.57□□□□□ -0.72
CDC42SE1-202ENST00000439374 MXRA8Q9BRK3 442 aa10.57□□□□□ -0.72
CDC42SE1-202ENST00000439374 PAGR1Q9BTK6 254 aa10.57□□□□□ -0.72
CDC42SE1-202ENST00000439374 STK33Q9BYT3 514 aa10.57□□□□□ -0.72
CDC42SE1-202ENST00000439374 GINS2Q9Y248 185 aa10.57□□□□□ -0.72
CDC42SE1-202ENST00000439374 TMX2Q9Y320 296 aa10.57□□□□□ -0.72
CDC42SE1-202ENST00000439374 SLC4A7Q9Y6M7 1214 aa10.57□□□□□ -0.72
CDC42SE1-202ENST00000439374 PFASO15067 1338 aa10.57□□□□□ -0.72
CDC42SE1-202ENST00000439374 SPATA31A6Q5VVP1 1343 aa10.57□□□□□ -0.72
CDC42SE1-202ENST00000439374 A0A1B0GUL6 1792 aa10.57□□□□□ -0.72
CDC42SE1-202ENST00000439374 SMCHD1A6NHR9 2005 aa10.57□□□□□ -0.72
CDC42SE1-202ENST00000439374 BCORQ6W2J9 1755 aa10.57□□□□□ -0.72
CDC42SE1-202ENST00000439374 ZBED4O75132 1171 aa10.57□□□□□ -0.72
CDC42SE1-202ENST00000439374 PSMD10O75832 226 aa10.57□□□□□ -0.72
CDC42SE1-202ENST00000439374 PYGLP06737 847 aa10.57□□□□□ -0.72
CDC42SE1-202ENST00000439374 ASNSP08243 561 aa10.57□□□□□ -0.72
CDC42SE1-202ENST00000439374 SERPINB4P48594 390 aa10.57□□□□□ -0.72
CDC42SE1-202ENST00000439374 ATXN3P54252 364 aaPredicted RBP10.57□□□□□ -0.72
CDC42SE1-202ENST00000439374 AUHQ13825 339 aaKnown RBP10.57□□□□□ -0.72
CDC42SE1-202ENST00000439374 CNGA2Q16280 664 aa10.57□□□□□ -0.72
CDC42SE1-202ENST00000439374 CFAP157Q5JU67 520 aa10.57□□□□□ -0.72
CDC42SE1-202ENST00000439374 AGBL2Q5U5Z8 902 aa10.57□□□□□ -0.72
CDC42SE1-202ENST00000439374 SPOPLQ6IQ16 392 aa10.57□□□□□ -0.72
CDC42SE1-202ENST00000439374 TATDN1Q6P1N9 297 aa10.57□□□□□ -0.72
CDC42SE1-202ENST00000439374 LRIG3Q6UXM1 1119 aa10.57□□□□□ -0.72
CDC42SE1-202ENST00000439374 UBL4BQ8N7F7 174 aa10.57□□□□□ -0.72
CDC42SE1-202ENST00000439374 MYLK2Q9H1R3 596 aa10.57□□□□□ -0.72
CDC42SE1-202ENST00000439374 KDM4CQ9H3R0 1056 aa10.57□□□□□ -0.72
CDC42SE1-202ENST00000439374 ZFATQ9P243 1243 aa10.57□□□□□ -0.72
CDC42SE1-202ENST00000439374 COG5Q9UP83 839 aa10.57□□□□□ -0.72
CDC42SE1-202ENST00000439374 TELO2Q9Y4R8 837 aa10.57□□□□□ -0.72
CDC42SE1-202ENST00000439374 IGLV3-22A0A075B6J6 115 aa10.57□□□□□ -0.72
CDC42SE1-202ENST00000439374 CCDC195A0A1B0GUA6 201 aa10.57□□□□□ -0.72
CDC42SE1-202ENST00000439374 CCDC188H7C350 402 aa10.57□□□□□ -0.72
CDC42SE1-202ENST00000439374 TBX3O15119 743 aa10.57□□□□□ -0.72
CDC42SE1-202ENST00000439374 STK10O94804 968 aaKnown RBP10.57□□□□□ -0.72
CDC42SE1-202ENST00000439374 P4HBP07237 508 aaKnown RBP10.57□□□□□ -0.72
CDC42SE1-202ENST00000439374 CYP3A4P08684 503 aa10.57□□□□□ -0.72
CDC42SE1-202ENST00000439374 GBP1P32455 592 aa10.57□□□□□ -0.72
CDC42SE1-202ENST00000439374 SEMA3FQ13275 785 aa10.57□□□□□ -0.72
CDC42SE1-202ENST00000439374 DMP1Q13316 513 aaPredicted RBP10.57□□□□□ -0.72
CDC42SE1-202ENST00000439374 HHATQ5VTY9 493 aa10.57□□□□□ -0.72
CDC42SE1-202ENST00000439374 C3orf20Q8ND61 904 aa10.57□□□□□ -0.72
CDC42SE1-202ENST00000439374 RFFLQ8WZ73 363 aa10.57□□□□□ -0.72
CDC42SE1-202ENST00000439374 POLR3CQ9BUI4 534 aaPredicted RBP10.57□□□□□ -0.72
CDC42SE1-202ENST00000439374 NUP85Q9BW27 656 aa10.57□□□□□ -0.72
CDC42SE1-202ENST00000439374 RPAP3Q9H6T3 665 aaPredicted RBP10.57□□□□□ -0.72
CDC42SE1-202ENST00000439374 PAPOLBQ9NRJ5 636 aaKnown RBP10.57□□□□□ -0.72
CDC42SE1-202ENST00000439374 ARMCX1Q9P291 453 aa10.57□□□□□ -0.72
CDC42SE1-202ENST00000439374 F5H423 210 aaPredicted RBP10.56□□□□□ -0.72
CDC42SE1-202ENST00000439374 ENTPD3O75355 529 aa10.56□□□□□ -0.72
CDC42SE1-202ENST00000439374 ATP4AP20648 1035 aa10.56□□□□□ -0.72
CDC42SE1-202ENST00000439374 MAPK7Q13164 816 aa10.56□□□□□ -0.72
CDC42SE1-202ENST00000439374 KIF22Q14807 665 aa10.56□□□□□ -0.72
CDC42SE1-202ENST00000439374 PLCB4Q15147 1175 aa10.56□□□□□ -0.72
CDC42SE1-202ENST00000439374 SNRNP48Q6IEG0 339 aaKnown RBP10.56□□□□□ -0.72
CDC42SE1-202ENST00000439374 SCARA5Q6ZMJ2 495 aa10.56□□□□□ -0.72
CDC42SE1-202ENST00000439374 TAS1R2Q8TE23 839 aa10.56□□□□□ -0.72
CDC42SE1-202ENST00000439374 ATP8B4Q8TF62 1192 aa10.56□□□□□ -0.72
CDC42SE1-202ENST00000439374 FAM151AQ8WW52 585 aa10.56□□□□□ -0.72
CDC42SE1-202ENST00000439374 ZNF317Q96PQ6 595 aaPredicted RBP10.56□□□□□ -0.72
CDC42SE1-202ENST00000439374 ANAPC7Q9UJX3 599 aa10.56□□□□□ -0.72
CDC42SE1-202ENST00000439374 C2CD2Q9Y426 696 aa10.56□□□□□ -0.72
CDC42SE1-202ENST00000439374 PLCH1Q4KWH8 1693 aa10.56□□□□□ -0.72
CDC42SE1-202ENST00000439374 CYP3A7-CYP3A51PA0A087WV96 503 aa10.56□□□□□ -0.72
CDC42SE1-202ENST00000439374 ZSCAN5DPP0CG00 497 aa10.56□□□□□ -0.72
CDC42SE1-202ENST00000439374 CYP3A7P24462 503 aa10.56□□□□□ -0.72
CDC42SE1-202ENST00000439374 CAP2P40123 477 aa10.56□□□□□ -0.72
CDC42SE1-202ENST00000439374 PIK3CAP42336 1068 aa10.56□□□□□ -0.72
CDC42SE1-202ENST00000439374 LIG4P49917 911 aa10.56□□□□□ -0.72
CDC42SE1-202ENST00000439374 CXCL9Q07325 125 aa10.56□□□□□ -0.72
CDC42SE1-202ENST00000439374 TRAF1Q13077 416 aa10.56□□□□□ -0.72
CDC42SE1-202ENST00000439374 C6orf118Q5T5N4 469 aa10.56□□□□□ -0.72
CDC42SE1-202ENST00000439374 RFWD3Q6PCD5 774 aa10.56□□□□□ -0.72
CDC42SE1-202ENST00000439374 ZNF365Q70YC5 407 aa10.56□□□□□ -0.72
CDC42SE1-202ENST00000439374 ATXN2LQ8WWM7 1075 aaKnown RBP10.56□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 19.7 ms