RNA–Protein interactions for RNA: ENST00000439235.5

CHD3-204, Transcript of chromodomain helicase DNA binding protein 3, humanhuman

TSL 5

Gene CHD3, Length 1,263 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD3-204ENST00000439235 ALKAL1Q6UXT8 129 aa22.39■■□□□ 1.17
CHD3-204ENST00000439235 ZNF598Q86UK7 904 aaKnown RBP22.39■■□□□ 1.17
CHD3-204ENST00000439235 EFCAB13Q8IY85 973 aa22.39■■□□□ 1.17
CHD3-204ENST00000439235 KIF12Q96FN5 646 aa22.39■■□□□ 1.17
CHD3-204ENST00000439235 RSAD1Q9HA92 442 aa22.39■■□□□ 1.17
CHD3-204ENST00000439235 IL23AQ9NPF7 189 aa22.39■■□□□ 1.17
CHD3-204ENST00000439235 TMEM161AQ9NX61 479 aa22.39■■□□□ 1.17
CHD3-204ENST00000439235 GTF3C5Q9Y5Q8 519 aaPredicted RBP22.39■■□□□ 1.17
CHD3-204ENST00000439235 ALPK3Q96L96 1907 aa22.39■■□□□ 1.17
CHD3-204ENST00000439235 ITIH6Q6UXX5 1313 aa22.38■■□□□ 1.17
CHD3-204ENST00000439235 ABHD14A-ACY1A0A1B0GW23 586 aa22.38■■□□□ 1.17
CHD3-204ENST00000439235 RBAK-RBAKDNI3L0D1 243 aa22.38■■□□□ 1.17
CHD3-204ENST00000439235 ACTN1P12814 892 aa22.38■■□□□ 1.17
CHD3-204ENST00000439235 KCNE1P15382 129 aa22.38■■□□□ 1.17
CHD3-204ENST00000439235 IBSPP21815 317 aaPredicted RBP22.38■■□□□ 1.17
CHD3-204ENST00000439235 PBX1P40424 430 aa22.38■■□□□ 1.17
CHD3-204ENST00000439235 FPGSQ05932 587 aa22.38■■□□□ 1.17
CHD3-204ENST00000439235 BIRC3Q13489 604 aa22.38■■□□□ 1.17
CHD3-204ENST00000439235 SYCP1Q15431 976 aa22.38■■□□□ 1.17
CHD3-204ENST00000439235 EXOC3L4Q17RC7 722 aa22.38■■□□□ 1.17
CHD3-204ENST00000439235 TCTN1Q2MV58 587 aa22.38■■□□□ 1.17
CHD3-204ENST00000439235 ZACNQ401N2 412 aa22.38■■□□□ 1.17
CHD3-204ENST00000439235 AGMOQ6ZNB7 445 aa22.38■■□□□ 1.17
CHD3-204ENST00000439235 SV2AQ7L0J3 742 aa22.38■■□□□ 1.17
CHD3-204ENST00000439235 VSTM4Q8IW00 320 aa22.38■■□□□ 1.17
CHD3-204ENST00000439235 ZNF516Q92618 1163 aa22.38■■□□□ 1.17
CHD3-204ENST00000439235 LPPQ93052 612 aa22.38■■□□□ 1.17
CHD3-204ENST00000439235 PCMTD1Q96MG8 357 aaPredicted RBP22.38■■□□□ 1.17
CHD3-204ENST00000439235 MTMR12Q9C0I1 747 aa22.38■■□□□ 1.17
CHD3-204ENST00000439235 KLK14Q9P0G3 267 aa22.38■■□□□ 1.17
CHD3-204ENST00000439235 GCNT4Q9P109 453 aa22.38■■□□□ 1.17
CHD3-204ENST00000439235 SCN5AQ14524 2016 aa22.37■■□□□ 1.17
CHD3-204ENST00000439235 PHACTR2O75167 634 aa22.37■■□□□ 1.17
CHD3-204ENST00000439235 C4BPAP04003 597 aaKnown RBP22.37■■□□□ 1.17
CHD3-204ENST00000439235 MLH1P40692 756 aa22.37■■□□□ 1.17
CHD3-204ENST00000439235 C15orf39Q6ZRI6 1047 aa22.37■■□□□ 1.17
CHD3-204ENST00000439235 DRC7Q8IY82 874 aa22.37■■□□□ 1.17
CHD3-204ENST00000439235 BEST2Q8NFU1 509 aa22.37■■□□□ 1.17
CHD3-204ENST00000439235 OR5B17Q8NGF7 314 aa22.37■■□□□ 1.17
CHD3-204ENST00000439235 LRFN2Q9ULH4 789 aa22.37■■□□□ 1.17
CHD3-204ENST00000439235 UBQLN1Q9UMX0 589 aaKnown RBP22.37■■□□□ 1.17
CHD3-204ENST00000439235 BRCA2P51587 3418 aa22.37■■□□□ 1.17
CHD3-204ENST00000439235 HOXA2O43364 376 aa22.36■■□□□ 1.17
CHD3-204ENST00000439235 BAIAP3O94812 1187 aa22.36■■□□□ 1.17
CHD3-204ENST00000439235 PIK3CAP42336 1068 aa22.36■■□□□ 1.17
CHD3-204ENST00000439235 EPC2Q52LR7 807 aa22.36■■□□□ 1.17
CHD3-204ENST00000439235 TDRD10Q5VZ19 366 aaKnown RBP22.36■■□□□ 1.17
CHD3-204ENST00000439235 SPECC1LQ69YQ0 1117 aa22.36■■□□□ 1.17
CHD3-204ENST00000439235 GLB1LQ6UWU2 654 aa22.36■■□□□ 1.17
CHD3-204ENST00000439235 TRAPPC11Q7Z392 1133 aa22.36■■□□□ 1.17
CHD3-204ENST00000439235 NPAS4Q8IUM7 802 aa22.36■■□□□ 1.17
CHD3-204ENST00000439235 FBXL13Q8NEE6 735 aa22.36■■□□□ 1.17
CHD3-204ENST00000439235 DPF3Q92784 378 aa22.36■■□□□ 1.17
CHD3-204ENST00000439235 BADQ92934 168 aa22.36■■□□□ 1.17
CHD3-204ENST00000439235 VWCEQ96DN2 955 aa22.36■■□□□ 1.17
CHD3-204ENST00000439235 IQCDQ96DY2 449 aa22.36■■□□□ 1.17
CHD3-204ENST00000439235 SLC38A7Q9NVC3 462 aa22.36■■□□□ 1.17
CHD3-204ENST00000439235 SIK3Q9Y2K2 1263 aa22.36■■□□□ 1.17
CHD3-204ENST00000439235 COQ4Q9Y3A0 265 aa22.36■■□□□ 1.17
CHD3-204ENST00000439235 PCDHB7Q9Y5E2 793 aa22.36■■□□□ 1.17
CHD3-204ENST00000439235 SMIM28A0A1B0GU29 152 aa22.35■■□□□ 1.17
CHD3-204ENST00000439235 LOC101059915A0A1B0GWI6 518 aaPredicted RBP22.35■■□□□ 1.17
CHD3-204ENST00000439235 MEIS3P2A8K0S8 358 aa22.35■■□□□ 1.17
CHD3-204ENST00000439235 GOLGA6L6A8MZA4 724 aa22.35■■□□□ 1.17
CHD3-204ENST00000439235 INPPL1O15357 1258 aa22.35■■□□□ 1.17
CHD3-204ENST00000439235 GLRA4Q5JXX5 417 aa22.35■■□□□ 1.17
CHD3-204ENST00000439235 TMC6Q7Z403 805 aa22.35■■□□□ 1.17
CHD3-204ENST00000439235 RSPH1Q8WYR4 309 aa22.35■■□□□ 1.17
CHD3-204ENST00000439235 ZMAT2Q96NC0 199 aaKnown RBP22.35■■□□□ 1.17
CHD3-204ENST00000439235 GAD1Q99259 594 aa22.35■■□□□ 1.17
CHD3-204ENST00000439235 CRACR2AQ9BSW2 395 aa22.35■■□□□ 1.17
CHD3-204ENST00000439235 LSM14BQ9BX40 385 aaKnown RBP22.35■■□□□ 1.17
CHD3-204ENST00000439235 INTS2Q9H0H0 1204 aaKnown RBP22.35■■□□□ 1.17
CHD3-204ENST00000439235 ITGA11Q9UKX5 1188 aa22.35■■□□□ 1.17
CHD3-204ENST00000439235 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP22.35■■□□□ 1.171e-6■■■■□ 19.3
CHD3-204ENST00000439235 ARL5CA6NH57 179 aa22.34■■□□□ 1.17
CHD3-204ENST00000439235 CYP3A5P20815 502 aa22.34■■□□□ 1.17
CHD3-204ENST00000439235 KCNMA1Q12791 1236 aa22.34■■□□□ 1.17
CHD3-204ENST00000439235 TRPC3Q13507 836 aa22.34■■□□□ 1.17
CHD3-204ENST00000439235 TRIM14Q14142 442 aa22.34■■□□□ 1.17
CHD3-204ENST00000439235 PSRC1Q6PGN9 363 aaPredicted RBP22.34■■□□□ 1.17
CHD3-204ENST00000439235 CCDC150Q8NCX0 1101 aa22.34■■□□□ 1.17
CHD3-204ENST00000439235 NEK11Q8NG66 645 aa22.34■■□□□ 1.17
CHD3-204ENST00000439235 URGCPQ8TCY9 931 aa22.34■■□□□ 1.17
CHD3-204ENST00000439235 TAS1R2Q8TE23 839 aa22.34■■□□□ 1.17
CHD3-204ENST00000439235 ZFP42Q96MM3 310 aa22.34■■□□□ 1.17
CHD3-204ENST00000439235 NUP58Q9BVL2 599 aa22.34■■□□□ 1.17
CHD3-204ENST00000439235 IMPG2Q9BZV3 1241 aa22.34■■□□□ 1.17
CHD3-204ENST00000439235 PLCB1Q9NQ66 1216 aa22.34■■□□□ 1.17
CHD3-204ENST00000439235 RAB20Q9NX57 234 aa22.34■■□□□ 1.17
CHD3-204ENST00000439235 R3HCC1Q9Y3T6 440 aaKnown RBP22.34■■□□□ 1.17
CHD3-204ENST00000439235 PTGESO14684 152 aa22.33■■□□□ 1.17
CHD3-204ENST00000439235 HLA-DRAP01903 254 aa22.33■■□□□ 1.17
CHD3-204ENST00000439235 AMHP03971 560 aa22.33■■□□□ 1.17
CHD3-204ENST00000439235 THP07101 528 aa22.33■■□□□ 1.17
CHD3-204ENST00000439235 TPM1P09493 284 aa22.33■■□□□ 1.17
CHD3-204ENST00000439235 PON1P27169 355 aa22.33■■□□□ 1.17
CHD3-204ENST00000439235 CCDC173Q0VFZ6 552 aa22.33■■□□□ 1.17
CHD3-204ENST00000439235 GRIK3Q13003 919 aa22.33■■□□□ 1.17
CHD3-204ENST00000439235 NCOA4Q13772 614 aa22.33■■□□□ 1.17
Retrieved 100 of 20,778 RNA–protein pairs in 105.7 ms