RNA–Protein interactions for RNA: ENST00000439128.6

NEK1-201, Transcript of NIMA related kinase 1, humanhuman

TSL 1 (best) BASIC

Gene NEK1, Length 5,653 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK1-201ENST00000439128 ZNF609O15014 1411 aa12.81□□□□□ -0.36
NEK1-201ENST00000439128 GLTPD2A6NH11 291 aa12.8□□□□□ -0.36
NEK1-201ENST00000439128 GOLGA8MH3BSY2 632 aa12.8□□□□□ -0.36
NEK1-201ENST00000439128 ZMYND10O75800 440 aa12.8□□□□□ -0.36
NEK1-201ENST00000439128 CCL23P55773 120 aa12.8□□□□□ -0.36
NEK1-201ENST00000439128 LBRQ14739 615 aaKnown RBP12.8□□□□□ -0.36
NEK1-201ENST00000439128 SEZ6Q53EL9 994 aa12.8□□□□□ -0.36
NEK1-201ENST00000439128 CDKL3Q8IVW4 592 aaPredicted RBP12.8□□□□□ -0.36
NEK1-201ENST00000439128 GMCL1P1Q8NEA9 526 aa12.8□□□□□ -0.36
NEK1-201ENST00000439128 NLGN2Q8NFZ4 835 aa12.8□□□□□ -0.36
NEK1-201ENST00000439128 RAPGEF5Q92565 580 aa12.8□□□□□ -0.36
NEK1-201ENST00000439128 PHF20Q9BVI0 1012 aa12.8□□□□□ -0.36
NEK1-201ENST00000439128 KCND2Q9NZV8 630 aa12.8□□□□□ -0.36
NEK1-201ENST00000439128 TBK1Q9UHD2 729 aa12.8□□□□□ -0.36
NEK1-201ENST00000439128 G3BP2Q9UN86 482 aaKnown RBP12.8□□□□□ -0.36
NEK1-201ENST00000439128 APOL1O14791 398 aa12.8□□□□□ -0.36
NEK1-201ENST00000439128 ADCYAP1R1P41586 468 aa12.8□□□□□ -0.36
NEK1-201ENST00000439128 MNAT1P51948 309 aa12.8□□□□□ -0.36
NEK1-201ENST00000439128 CUL4AQ13619 759 aa12.8□□□□□ -0.36
NEK1-201ENST00000439128 ZC2HC1CQ53FD0 456 aaPredicted RBP12.8□□□□□ -0.36
NEK1-201ENST00000439128 GJC2Q5T442 439 aaPredicted RBP12.8□□□□□ -0.36
NEK1-201ENST00000439128 NKX2-3Q8TAU0 364 aa12.8□□□□□ -0.36
NEK1-201ENST00000439128 UBA3Q8TBC4 463 aa12.8□□□□□ -0.36
NEK1-201ENST00000439128 ASAP3Q8TDY4 903 aa12.8□□□□□ -0.36
NEK1-201ENST00000439128 GOLGA8QA0A0J9YX86 632 aa12.8□□□□□ -0.36
NEK1-201ENST00000439128 GOLGA8OA6NCC3 632 aa12.8□□□□□ -0.36
NEK1-201ENST00000439128 LRRC53A6NM62 1247 aa12.8□□□□□ -0.36
NEK1-201ENST00000439128 GOLGA8NF8WBI6 632 aa12.8□□□□□ -0.36
NEK1-201ENST00000439128 VWA5AO00534 786 aa12.8□□□□□ -0.36
NEK1-201ENST00000439128 TTI1O43156 1089 aa12.8□□□□□ -0.36
NEK1-201ENST00000439128 FTLP02792 175 aaPredicted RBP12.8□□□□□ -0.36
NEK1-201ENST00000439128 WEE2P0C1S8 567 aa12.8□□□□□ -0.36
NEK1-201ENST00000439128 ZNF280DQ6N043 979 aa12.8□□□□□ -0.36
NEK1-201ENST00000439128 CES5AQ6NT32 575 aa12.8□□□□□ -0.36
NEK1-201ENST00000439128 SDCCAG3Q96C92 435 aa12.8□□□□□ -0.36
NEK1-201ENST00000439128 VCX3BQ9H321 246 aa12.8□□□□□ -0.36
NEK1-201ENST00000439128 VTA1Q9NP79 307 aa12.8□□□□□ -0.36
NEK1-201ENST00000439128 BCL9O00512 1426 aa12.8□□□□□ -0.36
NEK1-201ENST00000439128 GRAP2O75791 330 aa12.8□□□□□ -0.36
NEK1-201ENST00000439128 NCAM1P13591 858 aa12.8□□□□□ -0.36
NEK1-201ENST00000439128 ETFBP38117 255 aa12.8□□□□□ -0.36
NEK1-201ENST00000439128 PSEN2P49810 448 aa12.8□□□□□ -0.36
NEK1-201ENST00000439128 ROR1Q01973 937 aa12.8□□□□□ -0.36
NEK1-201ENST00000439128 TTC8Q8TAM2 541 aa12.8□□□□□ -0.36
NEK1-201ENST00000439128 HPS3Q969F9 1004 aa12.8□□□□□ -0.36
NEK1-201ENST00000439128 TRPM5Q9NZQ8 1165 aa12.8□□□□□ -0.36
NEK1-201ENST00000439128 KANSL3Q9P2N6 904 aa12.8□□□□□ -0.36
NEK1-201ENST00000439128 ATP8A1Q9Y2Q0 1164 aa12.8□□□□□ -0.36
NEK1-201ENST00000439128 FAM205CA6NFA0 338 aa12.79□□□□□ -0.36
NEK1-201ENST00000439128 PDXKO00764 312 aa12.79□□□□□ -0.36
NEK1-201ENST00000439128 EXTL3O43909 919 aa12.79□□□□□ -0.36
NEK1-201ENST00000439128 ZFXP17010 805 aaPredicted RBP12.79□□□□□ -0.36
NEK1-201ENST00000439128 MAP4P27816 1152 aaKnown RBP12.79□□□□□ -0.36
NEK1-201ENST00000439128 SLC11A2P49281 568 aa12.79□□□□□ -0.36
NEK1-201ENST00000439128 CDR2Q01850 454 aa12.79□□□□□ -0.36
NEK1-201ENST00000439128 PRAMEF19Q5SWL8 479 aa12.79□□□□□ -0.36
NEK1-201ENST00000439128 NECAB2Q7Z6G3 386 aa12.79□□□□□ -0.36
NEK1-201ENST00000439128 COG4Q9H9E3 785 aa12.79□□□□□ -0.36
NEK1-201ENST00000439128 LRRC4BQ9NT99 713 aa12.79□□□□□ -0.36
NEK1-201ENST00000439128 KLHL14Q9P2G3 628 aa12.79□□□□□ -0.36
NEK1-201ENST00000439128 LRRIQ1Q96JM4 1722 aa12.79□□□□□ -0.36
NEK1-201ENST00000439128 IRF6O14896 467 aa12.79□□□□□ -0.36
NEK1-201ENST00000439128 DR1Q01658 176 aa12.79□□□□□ -0.36
NEK1-201ENST00000439128 METTL7BQ6UX53 244 aa12.79□□□□□ -0.36
NEK1-201ENST00000439128 ITIH5Q86UX2 942 aa12.79□□□□□ -0.36
NEK1-201ENST00000439128 STN1Q9H668 368 aaKnown RBP12.79□□□□□ -0.36
NEK1-201ENST00000439128 CYB561D2O14569 222 aa12.79□□□□□ -0.36
NEK1-201ENST00000439128 RPL10AP62906 217 aaKnown RBP12.79□□□□□ -0.36
NEK1-201ENST00000439128 DBN1Q16643 649 aa12.79□□□□□ -0.36
NEK1-201ENST00000439128 CENPKQ9BS16 269 aa12.79□□□□□ -0.36
NEK1-201ENST00000439128 EEF2KO00418 725 aaKnown RBP12.79□□□□□ -0.36
NEK1-201ENST00000439128 TXNDC9O14530 226 aa12.79□□□□□ -0.36
NEK1-201ENST00000439128 VIL1P09327 827 aaKnown RBP12.79□□□□□ -0.36
NEK1-201ENST00000439128 PDGFRAP16234 1089 aa12.79□□□□□ -0.36
NEK1-201ENST00000439128 DCAF6Q58WW2 860 aa12.79□□□□□ -0.36
NEK1-201ENST00000439128 PPM1LQ5SGD2 360 aa12.79□□□□□ -0.36
NEK1-201ENST00000439128 GUF1Q8N442 669 aaKnown RBP12.79□□□□□ -0.36
NEK1-201ENST00000439128 FOPNLQ96NB1 174 aa12.79□□□□□ -0.36
NEK1-201ENST00000439128 DDX56Q9NY93 547 aaKnown RBP12.79□□□□□ -0.36
NEK1-201ENST00000439128 ZNF212Q9UDV6 495 aa12.79□□□□□ -0.36
NEK1-201ENST00000439128 MID2Q9UJV3 735 aa12.79□□□□□ -0.36
NEK1-201ENST00000439128 AK9Q5TCS8 1911 aa12.79□□□□□ -0.36
NEK1-201ENST00000439128 GNGT2O14610 69 aa12.79□□□□□ -0.36
NEK1-201ENST00000439128 MSH4O15457 936 aa12.79□□□□□ -0.36
NEK1-201ENST00000439128 ATP9BO43861 1147 aa12.79□□□□□ -0.36
NEK1-201ENST00000439128 PRKAR2AP13861 404 aaKnown RBP12.79□□□□□ -0.36
NEK1-201ENST00000439128 RFX5P48382 616 aaPredicted RBP12.79□□□□□ -0.36
NEK1-201ENST00000439128 POU5F1BQ06416 359 aa12.79□□□□□ -0.36
NEK1-201ENST00000439128 C2orf54Q08AI8 447 aa12.79□□□□□ -0.36
NEK1-201ENST00000439128 CARNMT1Q8N4J0 409 aa12.79□□□□□ -0.36
NEK1-201ENST00000439128 EPB41L5Q9HCM4 733 aa12.79□□□□□ -0.36
NEK1-201ENST00000439128 XYLBO75191 536 aa12.78□□□□□ -0.36
NEK1-201ENST00000439128 CABYRO75952 493 aa12.78□□□□□ -0.36
NEK1-201ENST00000439128 PGK1P00558 417 aa12.78□□□□□ -0.36
NEK1-201ENST00000439128 FGGP02679 453 aa12.78□□□□□ -0.36
NEK1-201ENST00000439128 CTNNB1P35222 781 aa12.78□□□□□ -0.36
NEK1-201ENST00000439128 ACADSBP45954 432 aa12.78□□□□□ -0.36
NEK1-201ENST00000439128 TAP1Q03518 808 aa12.78□□□□□ -0.36
NEK1-201ENST00000439128 RASSF3Q86WH2 238 aa12.78□□□□□ -0.36
NEK1-201ENST00000439128 SRRM1Q8IYB3 904 aaKnown RBP12.78□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 25 ms