RNA–Protein interactions for RNA: ENST00000438462.1

RTN4-211, Transcript of reticulon 4, humanhuman

TSL 5

Gene RTN4, Length 656 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN4-211ENST00000438462 DKK1O94907 266 aa12.59□□□□□ -0.39
RTN4-211ENST00000438462 PARP1P09874 1014 aaKnown RBP12.59□□□□□ -0.39
RTN4-211ENST00000438462 PTPN2P17706 415 aa12.59□□□□□ -0.39
RTN4-211ENST00000438462 FCHO2Q0JRZ9 810 aa12.59□□□□□ -0.39
RTN4-211ENST00000438462 CCDC173Q0VFZ6 552 aa12.59□□□□□ -0.39
RTN4-211ENST00000438462 PSMD5Q16401 504 aa12.59□□□□□ -0.39
RTN4-211ENST00000438462 DUOXA1Q1HG43 343 aa12.59□□□□□ -0.39
RTN4-211ENST00000438462 PREPLQ4J6C6 727 aaPredicted RBP12.59□□□□□ -0.39
RTN4-211ENST00000438462 HSP90AB4PQ58FF6 505 aa12.59□□□□□ -0.39
RTN4-211ENST00000438462 LYSMD4Q5XG99 296 aa12.59□□□□□ -0.39
RTN4-211ENST00000438462 HOMER1Q86YM7 354 aa12.59□□□□□ -0.39
RTN4-211ENST00000438462 SPACA3Q8IXA5 215 aa12.59□□□□□ -0.39
RTN4-211ENST00000438462 NLRP7Q8WX94 980 aa12.59□□□□□ -0.39
RTN4-211ENST00000438462 MTMR8Q96EF0 704 aa12.59□□□□□ -0.39
RTN4-211ENST00000438462 KIF1BPQ96EK5 621 aa12.59□□□□□ -0.39
RTN4-211ENST00000438462 GAD1Q99259 594 aa12.59□□□□□ -0.39
RTN4-211ENST00000438462 CORO1BQ9BR76 489 aa12.59□□□□□ -0.39
RTN4-211ENST00000438462 ZKSCAN3Q9BRR0 538 aa12.59□□□□□ -0.39
RTN4-211ENST00000438462 TRPV4Q9HBA0 871 aa12.59□□□□□ -0.39
RTN4-211ENST00000438462 PCOLCE2Q9UKZ9 415 aa12.59□□□□□ -0.39
RTN4-211ENST00000438462 PCDHB2Q9Y5E7 798 aa12.59□□□□□ -0.39
RTN4-211ENST00000438462 CNTNAP2Q9UHC6 1331 aa12.59□□□□□ -0.39
RTN4-211ENST00000438462 DNHD1Q96M86 4753 aa12.58□□□□□ -0.4
RTN4-211ENST00000438462 GOLGA8CPA6NN73 597 aa12.58□□□□□ -0.4
RTN4-211ENST00000438462 ARHGAP33O14559 1287 aa12.58□□□□□ -0.4
RTN4-211ENST00000438462 BACH1O14867 736 aa12.58□□□□□ -0.4
RTN4-211ENST00000438462 EGFP01133 1207 aa12.58□□□□□ -0.4
RTN4-211ENST00000438462 ZFYP08048 801 aaPredicted RBP12.58□□□□□ -0.4
RTN4-211ENST00000438462 SERPINF2P08697 491 aa12.58□□□□□ -0.4
RTN4-211ENST00000438462 ATXN1LP0C7T5 689 aaKnown RBP12.58□□□□□ -0.4
RTN4-211ENST00000438462 ITPKAP23677 461 aa12.58□□□□□ -0.4
RTN4-211ENST00000438462 DPP6P42658 865 aa12.58□□□□□ -0.4
RTN4-211ENST00000438462 DSC1Q08554 894 aa12.58□□□□□ -0.4
RTN4-211ENST00000438462 GRSF1Q12849 480 aaKnown RBP eCLIP12.58□□□□□ -0.4
RTN4-211ENST00000438462 TMEM196Q5HYL7 178 aa12.58□□□□□ -0.4
RTN4-211ENST00000438462 ARHGAP40Q5TG30 622 aa12.58□□□□□ -0.4
RTN4-211ENST00000438462 CEP85Q6P2H3 762 aa12.58□□□□□ -0.4
RTN4-211ENST00000438462 PDZD4Q76G19 769 aaPredicted RBP12.58□□□□□ -0.4
RTN4-211ENST00000438462 SYT13Q7L8C5 426 aa12.58□□□□□ -0.4
RTN4-211ENST00000438462 TMEM57Q8N5G2 664 aa12.58□□□□□ -0.4
RTN4-211ENST00000438462 LINC01465Q8N7H1 131 aa12.58□□□□□ -0.4
RTN4-211ENST00000438462 TSTD1Q8NFU3 115 aa12.58□□□□□ -0.4
RTN4-211ENST00000438462 RPLP0P6Q8NHW5 317 aa12.58□□□□□ -0.4
RTN4-211ENST00000438462 PSMG3-AS1Q96PY0 264 aa12.58□□□□□ -0.4
RTN4-211ENST00000438462 COLEC11Q9BWP8 271 aa12.58□□□□□ -0.4
RTN4-211ENST00000438462 ADAM28Q9UKQ2 775 aa12.58□□□□□ -0.4
RTN4-211ENST00000438462 MAN2B2Q9Y2E5 1009 aa12.58□□□□□ -0.4
RTN4-211ENST00000438462 ZMYM6O95789 1325 aa12.58□□□□□ -0.4
RTN4-211ENST00000438462 HOXD12P35452 270 aa12.57□□□□□ -0.4
RTN4-211ENST00000438462 TNK2Q07912 1038 aa12.57□□□□□ -0.4
RTN4-211ENST00000438462 KCNH2Q12809 1159 aa12.57□□□□□ -0.4
RTN4-211ENST00000438462 ANO7Q6IWH7 933 aa12.57□□□□□ -0.4
RTN4-211ENST00000438462 EFCAB12Q6NXP0 572 aa12.57□□□□□ -0.4
RTN4-211ENST00000438462 ATG14Q6ZNE5 492 aa12.57□□□□□ -0.4
RTN4-211ENST00000438462 TRMT1LQ7Z2T5 733 aaKnown RBP12.57□□□□□ -0.4
RTN4-211ENST00000438462 CCDC60Q8IWA6 550 aaPredicted RBP12.57□□□□□ -0.4
RTN4-211ENST00000438462 CEP76Q8TAP6 659 aa12.57□□□□□ -0.4
RTN4-211ENST00000438462 CPNE5Q9HCH3 593 aa12.57□□□□□ -0.4
RTN4-211ENST00000438462 ZFHX3Q15911 3703 aa12.57□□□□□ -0.4
RTN4-211ENST00000438462 IGKV6D-21A0A0A0MT36 114 aa12.56□□□□□ -0.4
RTN4-211ENST00000438462 ZNF197O14709 1029 aa12.56□□□□□ -0.4
RTN4-211ENST00000438462 NR1I2O75469 434 aa12.56□□□□□ -0.4
RTN4-211ENST00000438462 MICAL2O94851 1124 aa12.56□□□□□ -0.4
RTN4-211ENST00000438462 GJA1P17302 382 aa12.56□□□□□ -0.4
RTN4-211ENST00000438462 SFPQP23246 707 aaKnown RBP eCLIP12.56□□□□□ -0.42e-6■■■□□ 15.5
RTN4-211ENST00000438462 NFKB2Q00653 900 aa12.56□□□□□ -0.4
RTN4-211ENST00000438462 FAM160B1Q5W0V3 765 aa12.56□□□□□ -0.4
RTN4-211ENST00000438462 STAG2Q8N3U4 1231 aa12.56□□□□□ -0.4
RTN4-211ENST00000438462 SMARCC2Q8TAQ2 1214 aa12.56□□□□□ -0.4
RTN4-211ENST00000438462 LNX1Q8TBB1 728 aaPredicted RBP12.56□□□□□ -0.4
RTN4-211ENST00000438462 RABGGTAQ92696 567 aa12.56□□□□□ -0.4
RTN4-211ENST00000438462 E2F7Q96AV8 911 aa12.56□□□□□ -0.4
RTN4-211ENST00000438462 FNBP1Q96RU3 617 aa12.56□□□□□ -0.4
RTN4-211ENST00000438462 CIZ1Q9ULV3 898 aaPredicted RBP12.56□□□□□ -0.4
RTN4-211ENST00000438462 UBIAD1Q9Y5Z9 338 aa12.56□□□□□ -0.4
RTN4-211ENST00000438462 CEP192Q8TEP8 1941 aa12.56□□□□□ -0.4
RTN4-211ENST00000438462 BOD1L1Q8NFC6 3051 aa12.56□□□□□ -0.4
RTN4-211ENST00000438462 PLXND1Q9Y4D7 1925 aa12.55□□□□□ -0.4
RTN4-211ENST00000438462 BLACEA4D250 179 aa12.55□□□□□ -0.4
RTN4-211ENST00000438462 LRG1P02750 347 aa12.55□□□□□ -0.4
RTN4-211ENST00000438462 AFPP02771 609 aaKnown RBP12.55□□□□□ -0.4
RTN4-211ENST00000438462 ATP4AP20648 1035 aa12.55□□□□□ -0.4
RTN4-211ENST00000438462 ELAVL4P26378 380 aaKnown RBP12.55□□□□□ -0.4
RTN4-211ENST00000438462 TMOD1P28289 359 aa12.55□□□□□ -0.4
RTN4-211ENST00000438462 TMPRSS3P57727 454 aa12.55□□□□□ -0.4
RTN4-211ENST00000438462 SLFN5Q08AF3 891 aa12.55□□□□□ -0.4
RTN4-211ENST00000438462 SMAD1Q15797 465 aaKnown RBP12.55□□□□□ -0.4
RTN4-211ENST00000438462 USP17L6PQ6QN14 398 aa12.55□□□□□ -0.4
RTN4-211ENST00000438462 RASSF3Q86WH2 238 aa12.55□□□□□ -0.4
RTN4-211ENST00000438462 CEP57Q86XR8 500 aa12.55□□□□□ -0.4
RTN4-211ENST00000438462 CKAP2LQ8IYA6 745 aa12.55□□□□□ -0.4
RTN4-211ENST00000438462 SETD7Q8WTS6 366 aaKnown RBP12.55□□□□□ -0.4
RTN4-211ENST00000438462 ACDQ96AP0 544 aa12.55□□□□□ -0.4
RTN4-211ENST00000438462 SDF4Q9BRK5 362 aa12.55□□□□□ -0.4
RTN4-211ENST00000438462 SLITRK6Q9H5Y7 841 aa12.55□□□□□ -0.4
RTN4-211ENST00000438462 KAT14Q9H8E8 782 aa12.55□□□□□ -0.4
RTN4-211ENST00000438462 PRDM16Q9HAZ2 1276 aa12.55□□□□□ -0.4
RTN4-211ENST00000438462 AK5Q9Y6K8 562 aa12.55□□□□□ -0.4
RTN4-211ENST00000438462 ITPR2Q14571 2701 aa12.55□□□□□ -0.4
RTN4-211ENST00000438462 SF3B1O75533 1304 aaKnown RBP eCLIP12.55□□□□□ -0.42e-6■■■■■ 75.3
Retrieved 100 of 20,778 RNA–protein pairs in 57.6 ms