RNA–Protein interactions for RNA: ENST00000438362.6

CSDE1-205, Transcript of cold shock domain containing E1, humanhuman

TSL 1 (best) BASIC

Gene CSDE1, Length 4,167 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSDE1-205ENST00000438362 HGSNATQ68CP4 663 aa7.09□□□□□ -1.28
CSDE1-205ENST00000438362 CAPRIN2Q6IMN6 1127 aaKnown RBP7.09□□□□□ -1.28
CSDE1-205ENST00000438362 NCAPG2Q86XI2 1143 aa7.09□□□□□ -1.28
CSDE1-205ENST00000438362 CRLF3Q8IUI8 442 aa7.09□□□□□ -1.28
CSDE1-205ENST00000438362 CNPY4Q8N129 248 aa7.09□□□□□ -1.28
CSDE1-205ENST00000438362 AFAP1L2Q8N4X5 818 aa7.09□□□□□ -1.28
CSDE1-205ENST00000438362 CYP2W1Q8TAV3 490 aa7.09□□□□□ -1.28
CSDE1-205ENST00000438362 SPDL1Q96EA4 605 aa7.09□□□□□ -1.28
CSDE1-205ENST00000438362 GMCL1Q96IK5 515 aa7.09□□□□□ -1.28
CSDE1-205ENST00000438362 YY1AP1Q9H869 796 aa7.09□□□□□ -1.28
CSDE1-205ENST00000438362 NGRNQ9NPE2 291 aaKnown RBP7.09□□□□□ -1.28
CSDE1-205ENST00000438362 KCNH7Q9NS40 1196 aa7.09□□□□□ -1.28
CSDE1-205ENST00000438362 PCSK1NQ9UHG2 260 aa7.09□□□□□ -1.28
CSDE1-205ENST00000438362 KDM3BQ7LBC6 1761 aa7.08□□□□□ -1.28
CSDE1-205ENST00000438362 FAM86B1E9PN63 330 aa7.08□□□□□ -1.28
CSDE1-205ENST00000438362 RBAK-RBAKDNI3L0D1 243 aa7.08□□□□□ -1.28
CSDE1-205ENST00000438362 KRT38O76015 456 aa7.08□□□□□ -1.28
CSDE1-205ENST00000438362 FAM86B2P0C5J1 330 aa7.08□□□□□ -1.28
CSDE1-205ENST00000438362 SH3BGRP55822 239 aaPredicted RBP7.08□□□□□ -1.28
CSDE1-205ENST00000438362 RHBDL3P58872 404 aa7.08□□□□□ -1.28
CSDE1-205ENST00000438362 ZNF699Q32M78 642 aa7.08□□□□□ -1.28
CSDE1-205ENST00000438362 PLA2G4FQ68DD2 849 aa7.08□□□□□ -1.28
CSDE1-205ENST00000438362 RAB3IL1Q8TBN0 382 aa7.08□□□□□ -1.28
CSDE1-205ENST00000438362 SCFD2Q8WU76 684 aa7.08□□□□□ -1.28
CSDE1-205ENST00000438362 ATG4AQ8WYN0 398 aa7.08□□□□□ -1.28
CSDE1-205ENST00000438362 PGM2Q96G03 612 aa7.08□□□□□ -1.28
CSDE1-205ENST00000438362 ADAM33Q9BZ11 813 aa7.08□□□□□ -1.28
CSDE1-205ENST00000438362 UBXN6Q9BZV1 441 aa7.08□□□□□ -1.28
CSDE1-205ENST00000438362 WHRNQ9P202 907 aa7.08□□□□□ -1.28
CSDE1-205ENST00000438362 GGA2Q9UJY4 613 aa7.08□□□□□ -1.28
CSDE1-205ENST00000438362 TPX2Q9ULW0 747 aaKnown RBP7.08□□□□□ -1.28
CSDE1-205ENST00000438362 SPDYE2BA6NHP3 402 aa7.08□□□□□ -1.28
CSDE1-205ENST00000438362 KIAA0391O15091 583 aaKnown RBP7.08□□□□□ -1.28
CSDE1-205ENST00000438362 ASAP2O43150 1006 aa7.08□□□□□ -1.28
CSDE1-205ENST00000438362 TLR2O60603 784 aa7.08□□□□□ -1.28
CSDE1-205ENST00000438362 LPXNO60711 386 aa7.08□□□□□ -1.28
CSDE1-205ENST00000438362 SHOX2O60902 331 aaPredicted RBP7.08□□□□□ -1.28
CSDE1-205ENST00000438362 PDHA1P08559 390 aa7.08□□□□□ -1.28
CSDE1-205ENST00000438362 SPDYE6P0CI01 402 aa7.08□□□□□ -1.28
CSDE1-205ENST00000438362 CYP11B1P15538 503 aa7.08□□□□□ -1.28
CSDE1-205ENST00000438362 ARL1P40616 181 aaPredicted RBP7.08□□□□□ -1.28
CSDE1-205ENST00000438362 ACOT2P49753 483 aa7.08□□□□□ -1.28
CSDE1-205ENST00000438362 PSMC1P62191 440 aaKnown RBP7.08□□□□□ -1.28
CSDE1-205ENST00000438362 TAP1Q03518 808 aa7.08□□□□□ -1.28
CSDE1-205ENST00000438362 SPDYE2Q495Y8 402 aa7.08□□□□□ -1.28
CSDE1-205ENST00000438362 IRF2BP2Q7Z5L9 587 aa7.08□□□□□ -1.28
CSDE1-205ENST00000438362 ZC3H18Q86VM9 953 aaKnown RBP7.08□□□□□ -1.28
CSDE1-205ENST00000438362 ZNF677Q86XU0 584 aa7.08□□□□□ -1.28
CSDE1-205ENST00000438362 RHPN2Q8IUC4 686 aa7.08□□□□□ -1.28
CSDE1-205ENST00000438362 CBWD2Q8IUF1 395 aa7.08□□□□□ -1.28
CSDE1-205ENST00000438362 ANKMY2Q8IV38 441 aa7.08□□□□□ -1.28
CSDE1-205ENST00000438362 WDR75Q8IWA0 830 aaKnown RBP7.08□□□□□ -1.28
CSDE1-205ENST00000438362 EXOC8Q8IYI6 725 aa7.08□□□□□ -1.28
CSDE1-205ENST00000438362 NME8Q8N427 588 aa7.08□□□□□ -1.28
CSDE1-205ENST00000438362 PPM1NQ8N819 430 aa7.08□□□□□ -1.28
CSDE1-205ENST00000438362 GABPB2Q8TAK5 448 aaPredicted RBP7.08□□□□□ -1.28
CSDE1-205ENST00000438362 SENP7Q9BQF6 1050 aa7.08□□□□□ -1.28
CSDE1-205ENST00000438362 PI4K2AQ9BTU6 479 aa7.08□□□□□ -1.28
CSDE1-205ENST00000438362 KLC2Q9H0B6 622 aa7.08□□□□□ -1.28
CSDE1-205ENST00000438362 Q9H521 79 aa7.08□□□□□ -1.28
CSDE1-205ENST00000438362 PPCSQ9HAB8 311 aa7.08□□□□□ -1.28
CSDE1-205ENST00000438362 SLC24A3Q9HC58 644 aa7.08□□□□□ -1.28
CSDE1-205ENST00000438362 KCNMB3Q9NPA1 279 aa7.08□□□□□ -1.28
CSDE1-205ENST00000438362 DDX4Q9NQI0 724 aaKnown RBP7.08□□□□□ -1.28
CSDE1-205ENST00000438362 SEPT10Q9P0V9 454 aa7.08□□□□□ -1.28
CSDE1-205ENST00000438362 HNRNPCL1O60812 293 aaKnown RBP7.08□□□□□ -1.28
CSDE1-205ENST00000438362 HLA-DRAP01903 254 aa7.08□□□□□ -1.28
CSDE1-205ENST00000438362 ARP10275 920 aa7.08□□□□□ -1.28
CSDE1-205ENST00000438362 NQO1P15559 274 aaKnown RBP7.08□□□□□ -1.28
CSDE1-205ENST00000438362 POLD1P28340 1107 aa7.08□□□□□ -1.28
CSDE1-205ENST00000438362 SLC12A2P55011 1212 aa7.08□□□□□ -1.28
CSDE1-205ENST00000438362 IGBP1P78318 339 aa7.08□□□□□ -1.28
CSDE1-205ENST00000438362 KCNA1Q09470 495 aa7.08□□□□□ -1.28
CSDE1-205ENST00000438362 MAP7Q14244 749 aa7.08□□□□□ -1.28
CSDE1-205ENST00000438362 MAPK6Q16659 721 aa7.08□□□□□ -1.28
CSDE1-205ENST00000438362 CDO1Q16878 200 aa7.08□□□□□ -1.28
CSDE1-205ENST00000438362 GEN1Q17RS7 908 aa7.08□□□□□ -1.28
CSDE1-205ENST00000438362 SPDYCQ5MJ68 293 aa7.08□□□□□ -1.28
CSDE1-205ENST00000438362 PDZD4Q76G19 769 aaPredicted RBP7.08□□□□□ -1.28
CSDE1-205ENST00000438362 RBBP8NLQ8NC74 664 aaPredicted RBP7.08□□□□□ -1.28
CSDE1-205ENST00000438362 ARHGEF26Q96DR7 871 aa7.08□□□□□ -1.28
CSDE1-205ENST00000438362 HEXIM2Q96MH2 286 aaKnown RBP7.08□□□□□ -1.28
CSDE1-205ENST00000438362 ZDHHC15Q96MV8 337 aa7.08□□□□□ -1.28
CSDE1-205ENST00000438362 YIPF3Q9GZM5 350 aa7.08□□□□□ -1.28
CSDE1-205ENST00000438362 KCTD10Q9H3F6 313 aa7.08□□□□□ -1.28
CSDE1-205ENST00000438362 RPF1Q9H9Y2 349 aaKnown RBP7.08□□□□□ -1.28
CSDE1-205ENST00000438362 ASNSD1Q9NWL6 643 aa7.08□□□□□ -1.28
CSDE1-205ENST00000438362 PSMC3IPQ9P2W1 217 aaPredicted RBP7.08□□□□□ -1.28
CSDE1-205ENST00000438362 SALL4Q9UJQ4 1053 aa7.08□□□□□ -1.28
CSDE1-205ENST00000438362 TTLL3Q9Y4R7 772 aa7.08□□□□□ -1.28
CSDE1-205ENST00000438362 ZHX2Q9Y6X8 837 aa7.08□□□□□ -1.28
CSDE1-205ENST00000438362 SPECC1L-ADORA2AF8WAN1 911 aa7.07□□□□□ -1.28
CSDE1-205ENST00000438362 RIPK2O43353 540 aa7.07□□□□□ -1.28
CSDE1-205ENST00000438362 UBOX5O94941 541 aa7.07□□□□□ -1.28
CSDE1-205ENST00000438362 RPL21P46778 160 aaKnown RBP7.07□□□□□ -1.28
CSDE1-205ENST00000438362 MARSP56192 900 aaKnown RBP7.07□□□□□ -1.28
CSDE1-205ENST00000438362 IFI35P80217 286 aaPredicted RBP7.07□□□□□ -1.28
CSDE1-205ENST00000438362 DNAJC3Q13217 504 aa7.07□□□□□ -1.28
CSDE1-205ENST00000438362 PSMD6Q15008 389 aa7.07□□□□□ -1.28
CSDE1-205ENST00000438362 TRADDQ15628 312 aa7.07□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 70.8 ms