RNA–Protein interactions for RNA: ENST00000438317.5

ERGIC3-207, Transcript of ERGIC and golgi 3, humanhuman

TSL 3

Gene ERGIC3, Length 590 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERGIC3-207ENST00000438317 CUL1Q13616 776 aa11.86□□□□□ -0.51
ERGIC3-207ENST00000438317 PSMD6Q15008 389 aa11.86□□□□□ -0.51
ERGIC3-207ENST00000438317 PWP2Q15269 919 aaKnown RBP11.86□□□□□ -0.51
ERGIC3-207ENST00000438317 SHHQ15465 462 aa11.86□□□□□ -0.51
ERGIC3-207ENST00000438317 MORN1Q5T089 497 aa11.86□□□□□ -0.51
ERGIC3-207ENST00000438317 C11orf63Q6NUN7 778 aa11.86□□□□□ -0.51
ERGIC3-207ENST00000438317 SND1Q7KZF4 910 aaKnown RBP eCLIP11.86□□□□□ -0.517e-29■■■□□ 18.4
ERGIC3-207ENST00000438317 HDAC7Q8WUI4 952 aa11.86□□□□□ -0.51
ERGIC3-207ENST00000438317 MYLIPQ8WY64 445 aa11.86□□□□□ -0.51
ERGIC3-207ENST00000438317 BSNDQ8WZ55 320 aa11.86□□□□□ -0.51
ERGIC3-207ENST00000438317 BICD1Q96G01 975 aa11.86□□□□□ -0.51
ERGIC3-207ENST00000438317 FAM167AQ96KS9 214 aa11.86□□□□□ -0.51
ERGIC3-207ENST00000438317 KRT12Q99456 494 aa11.86□□□□□ -0.51
ERGIC3-207ENST00000438317 SH2D3AQ9BRG2 576 aa11.86□□□□□ -0.51
ERGIC3-207ENST00000438317 POLR3FQ9H1D9 316 aaPredicted RBP11.86□□□□□ -0.51
ERGIC3-207ENST00000438317 PORCNQ9H237 461 aa11.86□□□□□ -0.51
ERGIC3-207ENST00000438317 CARD9Q9H257 536 aa11.86□□□□□ -0.51
ERGIC3-207ENST00000438317 TTYH1Q9H313 450 aaPredicted RBP11.86□□□□□ -0.51
ERGIC3-207ENST00000438317 DHX33Q9H6R0 707 aaKnown RBP11.86□□□□□ -0.51
ERGIC3-207ENST00000438317 SEPT11Q9NVA2 429 aaKnown RBP11.86□□□□□ -0.51
ERGIC3-207ENST00000438317 RBPJLQ9UBG7 517 aa11.86□□□□□ -0.51
ERGIC3-207ENST00000438317 LTBP2Q14767 1821 aa11.86□□□□□ -0.51
ERGIC3-207ENST00000438317 FRMPD3Q5JV73 1810 aa11.86□□□□□ -0.51
ERGIC3-207ENST00000438317 SYNGAP1Q96PV0 1343 aa11.86□□□□□ -0.51
ERGIC3-207ENST00000438317 CCDC66A2RUB6 948 aa11.85□□□□□ -0.51
ERGIC3-207ENST00000438317 GOLGA6BA6NDN3 693 aa11.85□□□□□ -0.51
ERGIC3-207ENST00000438317 A6NNZ2 444 aa11.85□□□□□ -0.51
ERGIC3-207ENST00000438317 KRIT1O00522 736 aa11.85□□□□□ -0.51
ERGIC3-207ENST00000438317 HNRNPDLO14979 420 aaKnown RBP11.85□□□□□ -0.51
ERGIC3-207ENST00000438317 BUB1BO60566 1050 aaPredicted RBP11.85□□□□□ -0.51
ERGIC3-207ENST00000438317 HSF2BPO75031 334 aa11.85□□□□□ -0.51
ERGIC3-207ENST00000438317 HEXIM1O94992 359 aaKnown RBP11.85□□□□□ -0.51
ERGIC3-207ENST00000438317 COL9A1P20849 921 aa11.85□□□□□ -0.51
ERGIC3-207ENST00000438317 EDNRBP24530 442 aa11.85□□□□□ -0.51
ERGIC3-207ENST00000438317 ARL2P36404 184 aa11.85□□□□□ -0.51
ERGIC3-207ENST00000438317 USP8P40818 1118 aa11.85□□□□□ -0.51
ERGIC3-207ENST00000438317 AP3M2P53677 418 aa11.85□□□□□ -0.51
ERGIC3-207ENST00000438317 SLC7A5Q01650 507 aa11.85□□□□□ -0.51
ERGIC3-207ENST00000438317 CDR2Q01850 454 aa11.85□□□□□ -0.51
ERGIC3-207ENST00000438317 GCNT1Q02742 428 aa11.85□□□□□ -0.51
ERGIC3-207ENST00000438317 PRPF4BQ13523 1007 aaKnown RBP11.85□□□□□ -0.51
ERGIC3-207ENST00000438317 EMC2Q15006 297 aa11.85□□□□□ -0.51
ERGIC3-207ENST00000438317 TUBB8Q3ZCM7 444 aa11.85□□□□□ -0.51
ERGIC3-207ENST00000438317 MTERF2Q49AM1 385 aa11.85□□□□□ -0.51
ERGIC3-207ENST00000438317 WDR44Q5JSH3 913 aa11.85□□□□□ -0.51
ERGIC3-207ENST00000438317 C9orf50Q5SZB4 431 aa11.85□□□□□ -0.51
ERGIC3-207ENST00000438317 PPP1R2P3Q6NXS1 205 aa11.85□□□□□ -0.51
ERGIC3-207ENST00000438317 SLC39A4Q6P5W5 647 aa11.85□□□□□ -0.51
ERGIC3-207ENST00000438317 SV2AQ7L0J3 742 aa11.85□□□□□ -0.51
ERGIC3-207ENST00000438317 CYFIP1Q7L576 1253 aa11.85□□□□□ -0.51
ERGIC3-207ENST00000438317 ZNF677Q86XU0 584 aa11.85□□□□□ -0.51
ERGIC3-207ENST00000438317 RPUSD2Q8IZ73 545 aaKnown RBP11.85□□□□□ -0.51
ERGIC3-207ENST00000438317 MREGQ8N565 214 aa11.85□□□□□ -0.51
ERGIC3-207ENST00000438317 UBL4BQ8N7F7 174 aa11.85□□□□□ -0.51
ERGIC3-207ENST00000438317 GPRC5AQ8NFJ5 357 aa11.85□□□□□ -0.51
ERGIC3-207ENST00000438317 DEPTORQ8TB45 409 aa11.85□□□□□ -0.51
ERGIC3-207ENST00000438317 HELQQ8TDG4 1101 aa11.85□□□□□ -0.51
ERGIC3-207ENST00000438317 AFAP1L1Q8TED9 768 aa11.85□□□□□ -0.51
ERGIC3-207ENST00000438317 PSPC1Q8WXF1 523 aaKnown RBP11.85□□□□□ -0.51
ERGIC3-207ENST00000438317 SOCS4Q8WXH5 440 aa11.85□□□□□ -0.51
ERGIC3-207ENST00000438317 SLC7A3Q8WY07 619 aa11.85□□□□□ -0.51
ERGIC3-207ENST00000438317 SEPT1Q8WYJ6 367 aa11.85□□□□□ -0.51
ERGIC3-207ENST00000438317 CCDC127Q96BQ5 260 aa11.85□□□□□ -0.51
ERGIC3-207ENST00000438317 SAAL1Q96ER3 474 aa11.85□□□□□ -0.51
ERGIC3-207ENST00000438317 LBHD1Q9BQE6 289 aaPredicted RBP11.85□□□□□ -0.51
ERGIC3-207ENST00000438317 SENP6Q9GZR1 1112 aaPredicted RBP11.85□□□□□ -0.51
ERGIC3-207ENST00000438317 SPATC1LQ9H0A9 340 aa11.85□□□□□ -0.51
ERGIC3-207ENST00000438317 WNT8AQ9H1J5 351 aa11.85□□□□□ -0.51
ERGIC3-207ENST00000438317 EPB41L5Q9HCM4 733 aa11.85□□□□□ -0.51
ERGIC3-207ENST00000438317 VPS18Q9P253 973 aa11.85□□□□□ -0.51
ERGIC3-207ENST00000438317 PACSIN2Q9UNF0 486 aaPredicted RBP11.85□□□□□ -0.51
ERGIC3-207ENST00000438317 SIP14410 1827 aa11.85□□□□□ -0.51
ERGIC3-207ENST00000438317 A0A0G2JMZ2 1700 aa11.84□□□□□ -0.51
ERGIC3-207ENST00000438317 GSTTP1A0A1W2PQM5 241 aa11.84□□□□□ -0.51
ERGIC3-207ENST00000438317 BHMG1C9JSJ3 638 aaPredicted RBP11.84□□□□□ -0.51
ERGIC3-207ENST00000438317 GOLGA8KD6RF30 607 aa11.84□□□□□ -0.51
ERGIC3-207ENST00000438317 GAS2O43903 313 aaKnown RBP11.84□□□□□ -0.51
ERGIC3-207ENST00000438317 LRRN2O75325 713 aa11.84□□□□□ -0.51
ERGIC3-207ENST00000438317 GGPS1O95749 300 aa11.84□□□□□ -0.51
ERGIC3-207ENST00000438317 SYF2O95926 243 aaKnown RBP11.84□□□□□ -0.51
ERGIC3-207ENST00000438317 CHRNB2P17787 502 aa11.84□□□□□ -0.51
ERGIC3-207ENST00000438317 ABCB4P21439 1286 aa11.84□□□□□ -0.51
ERGIC3-207ENST00000438317 STAT5BP51692 787 aa11.84□□□□□ -0.51
ERGIC3-207ENST00000438317 EFNA5P52803 228 aa11.84□□□□□ -0.51
ERGIC3-207ENST00000438317 IRX3P78415 501 aaPredicted RBP11.84□□□□□ -0.51
ERGIC3-207ENST00000438317 SP2Q02086 613 aa11.84□□□□□ -0.51
ERGIC3-207ENST00000438317 CNTN2Q02246 1040 aa11.84□□□□□ -0.51
ERGIC3-207ENST00000438317 GUCY2DQ02846 1103 aa11.84□□□□□ -0.51
ERGIC3-207ENST00000438317 ACAD10Q6JQN1 1059 aa11.84□□□□□ -0.51
ERGIC3-207ENST00000438317 C15orf39Q6ZRI6 1047 aa11.84□□□□□ -0.51
ERGIC3-207ENST00000438317 SEPT14Q6ZU15 432 aa11.84□□□□□ -0.51
ERGIC3-207ENST00000438317 TRMT1LQ7Z2T5 733 aaKnown RBP11.84□□□□□ -0.51
ERGIC3-207ENST00000438317 GPR142Q7Z601 462 aa11.84□□□□□ -0.51
ERGIC3-207ENST00000438317 PPM1KQ8N3J5 372 aa11.84□□□□□ -0.51
ERGIC3-207ENST00000438317 SEMA4DQ92854 862 aa11.84□□□□□ -0.51
ERGIC3-207ENST00000438317 KREMEN1Q96MU8 473 aa11.84□□□□□ -0.51
ERGIC3-207ENST00000438317 FNBP1Q96RU3 617 aa11.84□□□□□ -0.51
ERGIC3-207ENST00000438317 JPH2Q9BR39 696 aaPredicted RBP11.84□□□□□ -0.51
ERGIC3-207ENST00000438317 ZMYND15Q9H091 742 aa11.84□□□□□ -0.51
ERGIC3-207ENST00000438317 THAP2Q9H0W7 228 aa11.84□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 14.9 ms