RNA–Protein interactions for RNA: ENST00000436786.1

LINC01239-202, Transcript of long intergenic non-protein coding RNA 1239, humanhuman

TSL 2 BASIC

Gene LINC01239, Length 2,347 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01239-202ENST00000436786 RTP3Q9BQQ7 232 aa4.9□□□□□ -1.63
LINC01239-202ENST00000436786 PAAF1Q9BRP4 392 aa4.9□□□□□ -1.63
LINC01239-202ENST00000436786 NFKBIZQ9BYH8 718 aa4.9□□□□□ -1.63
LINC01239-202ENST00000436786 CXCL16Q9H2A7 254 aa4.9□□□□□ -1.63
LINC01239-202ENST00000436786 PLEKHA4Q9H4M7 779 aa4.9□□□□□ -1.63
LINC01239-202ENST00000436786 PIDD1Q9HB75 910 aa4.9□□□□□ -1.63
LINC01239-202ENST00000436786 GPRC5CQ9NQ84 441 aa4.9□□□□□ -1.63
LINC01239-202ENST00000436786 ADAM28Q9UKQ2 775 aa4.9□□□□□ -1.63
LINC01239-202ENST00000436786 CA14Q9ULX7 337 aa4.9□□□□□ -1.63
LINC01239-202ENST00000436786 DENND4AQ7Z401 1863 aa4.9□□□□□ -1.63
LINC01239-202ENST00000436786 LRRIQ4A6NIV6 560 aa4.89□□□□□ -1.63
LINC01239-202ENST00000436786 ANHXE9PGG2 379 aa4.89□□□□□ -1.63
LINC01239-202ENST00000436786 DPYSL4O14531 572 aa4.89□□□□□ -1.63
LINC01239-202ENST00000436786 NEMFO60524 1076 aa4.89□□□□□ -1.63
LINC01239-202ENST00000436786 USO1O60763 962 aaKnown RBP4.89□□□□□ -1.63
LINC01239-202ENST00000436786 LARGE1O95461 756 aa4.89□□□□□ -1.63
LINC01239-202ENST00000436786 C1RP00736 705 aa4.89□□□□□ -1.63
LINC01239-202ENST00000436786 SPATA31C1P0DKV0 1188 aa4.89□□□□□ -1.63
LINC01239-202ENST00000436786 SRFP11831 508 aa4.89□□□□□ -1.63
LINC01239-202ENST00000436786 XRCC6P12956 609 aaKnown RBP eCLIP4.89□□□□□ -1.63
LINC01239-202ENST00000436786 LAMP2P13473 410 aa4.89□□□□□ -1.63
LINC01239-202ENST00000436786 NTHL1P78549 312 aa4.89□□□□□ -1.63
LINC01239-202ENST00000436786 GRIK3Q13003 919 aa4.89□□□□□ -1.63
LINC01239-202ENST00000436786 HSP90AA2PQ14568 343 aaPredicted RBP4.89□□□□□ -1.63
LINC01239-202ENST00000436786 ME3Q16798 604 aa4.89□□□□□ -1.63
LINC01239-202ENST00000436786 RTP2Q5QGT7 225 aa4.89□□□□□ -1.63
LINC01239-202ENST00000436786 GET4Q7L5D6 327 aaPredicted RBP4.89□□□□□ -1.63
LINC01239-202ENST00000436786 TTC13Q8NBP0 860 aa4.89□□□□□ -1.63
LINC01239-202ENST00000436786 GPR152Q8TDT2 470 aa4.89□□□□□ -1.63
LINC01239-202ENST00000436786 HASPINQ8TF76 798 aa4.89□□□□□ -1.63
LINC01239-202ENST00000436786 NXPE3Q969Y0 559 aa4.89□□□□□ -1.63
LINC01239-202ENST00000436786 CCDC43Q96MW1 224 aaKnown RBP4.89□□□□□ -1.63
LINC01239-202ENST00000436786 TMEM60Q9H2L4 133 aa4.89□□□□□ -1.63
LINC01239-202ENST00000436786 TBC1D17Q9HA65 648 aa4.89□□□□□ -1.63
LINC01239-202ENST00000436786 BRMS1Q9HCU9 246 aa4.89□□□□□ -1.63
LINC01239-202ENST00000436786 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP4.89□□□□□ -1.63
LINC01239-202ENST00000436786 ZDHHC7Q9NXF8 308 aa4.89□□□□□ -1.63
LINC01239-202ENST00000436786 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP4.89□□□□□ -1.63
LINC01239-202ENST00000436786 FNIP2Q9P278 1114 aa4.89□□□□□ -1.63
LINC01239-202ENST00000436786 USP20Q9Y2K6 914 aa4.89□□□□□ -1.63
LINC01239-202ENST00000436786 CASTOR2A6NHX0 329 aa4.89□□□□□ -1.63
LINC01239-202ENST00000436786 PTGESO14684 152 aa4.89□□□□□ -1.63
LINC01239-202ENST00000436786 JAK2O60674 1132 aa4.89□□□□□ -1.63
LINC01239-202ENST00000436786 MED24O75448 989 aa4.89□□□□□ -1.63
LINC01239-202ENST00000436786 ZMYND10O75800 440 aa4.89□□□□□ -1.63
LINC01239-202ENST00000436786 ATP2B1P20020 1258 aa4.89□□□□□ -1.63
LINC01239-202ENST00000436786 RFX1P22670 979 aa4.89□□□□□ -1.63
LINC01239-202ENST00000436786 FSHRP23945 695 aa4.89□□□□□ -1.63
LINC01239-202ENST00000436786 IGFBP6P24592 240 aaPredicted RBP4.89□□□□□ -1.63
LINC01239-202ENST00000436786 CREMQ03060 361 aa4.89□□□□□ -1.63
LINC01239-202ENST00000436786 TUSC3Q13454 348 aa4.89□□□□□ -1.63
LINC01239-202ENST00000436786 CAMK2BQ13554 666 aa4.89□□□□□ -1.63
LINC01239-202ENST00000436786 HTR4Q13639 388 aa4.89□□□□□ -1.63
LINC01239-202ENST00000436786 ANKRD1Q15327 319 aa4.89□□□□□ -1.63
LINC01239-202ENST00000436786 SPECC1Q5M775 1068 aa4.89□□□□□ -1.63
LINC01239-202ENST00000436786 FAM171A1Q5VUB5 890 aa4.89□□□□□ -1.63
LINC01239-202ENST00000436786 CDCA2Q69YH5 1023 aaPredicted RBP4.89□□□□□ -1.63
LINC01239-202ENST00000436786 GRASPQ7Z6J2 395 aaPredicted RBP4.89□□□□□ -1.63
LINC01239-202ENST00000436786 CATSPER3Q86XQ3 398 aa4.89□□□□□ -1.63
LINC01239-202ENST00000436786 CEP57Q86XR8 500 aa4.89□□□□□ -1.63
LINC01239-202ENST00000436786 DIS3L2Q8IYB7 885 aaKnown RBP4.89□□□□□ -1.63
LINC01239-202ENST00000436786 GPR65Q8IYL9 337 aa4.89□□□□□ -1.63
LINC01239-202ENST00000436786 GALNT6Q8NCL4 622 aa4.89□□□□□ -1.63
LINC01239-202ENST00000436786 NSUN7Q8NE18 718 aaKnown RBP4.89□□□□□ -1.63
LINC01239-202ENST00000436786 BSNDQ8WZ55 320 aa4.89□□□□□ -1.63
LINC01239-202ENST00000436786 GTF3C6Q969F1 213 aa4.89□□□□□ -1.63
LINC01239-202ENST00000436786 MRGPRX2Q96LB1 330 aa4.89□□□□□ -1.63
LINC01239-202ENST00000436786 KRTAP4-12Q9BQ66 201 aa4.89□□□□□ -1.63
LINC01239-202ENST00000436786 CLSTN3Q9BQT9 956 aa4.89□□□□□ -1.63
LINC01239-202ENST00000436786 TTPALQ9BTX7 342 aa4.89□□□□□ -1.63
LINC01239-202ENST00000436786 RPP25Q9BUL9 199 aaKnown RBP4.89□□□□□ -1.63
LINC01239-202ENST00000436786 FZD8Q9H461 694 aa4.89□□□□□ -1.63
LINC01239-202ENST00000436786 PDZD7Q9H5P4 517 aa4.89□□□□□ -1.63
LINC01239-202ENST00000436786 PRMT7Q9NVM4 692 aaPredicted RBP4.89□□□□□ -1.63
LINC01239-202ENST00000436786 SNTG2Q9NY99 539 aa4.89□□□□□ -1.63
LINC01239-202ENST00000436786 NUMBLQ9Y6R0 609 aa4.89□□□□□ -1.63
LINC01239-202ENST00000436786 ZDBF2Q9HCK1 2354 aa4.88□□□□□ -1.63
LINC01239-202ENST00000436786 ZMYM2Q9UBW7 1377 aa4.88□□□□□ -1.63
LINC01239-202ENST00000436786 SF3B1O75533 1304 aaKnown RBP eCLIP4.88□□□□□ -1.63
LINC01239-202ENST00000436786 ARID2Q68CP9 1835 aa4.88□□□□□ -1.63
LINC01239-202ENST00000436786 ADAM12O43184 909 aa4.88□□□□□ -1.63
LINC01239-202ENST00000436786 KIF4AO95239 1232 aa4.88□□□□□ -1.63
LINC01239-202ENST00000436786 EDN1P05305 212 aa4.88□□□□□ -1.63
LINC01239-202ENST00000436786 DCNP07585 359 aaKnown RBP4.88□□□□□ -1.63
LINC01239-202ENST00000436786 LIG1P18858 919 aa4.88□□□□□ -1.63
LINC01239-202ENST00000436786 MCM7P33993 719 aa4.88□□□□□ -1.63
LINC01239-202ENST00000436786 PRPF4BQ13523 1007 aaKnown RBP4.88□□□□□ -1.63
LINC01239-202ENST00000436786 NAB2Q15742 525 aa4.88□□□□□ -1.63
LINC01239-202ENST00000436786 FAM187BQ17R55 369 aa4.88□□□□□ -1.63
LINC01239-202ENST00000436786 TMEM132AQ24JP5 1023 aa4.88□□□□□ -1.63
LINC01239-202ENST00000436786 PHLDB3Q6NSJ2 640 aa4.88□□□□□ -1.63
LINC01239-202ENST00000436786 DCLRE1AQ6PJP8 1040 aa4.88□□□□□ -1.63
LINC01239-202ENST00000436786 PADI6Q6TGC4 694 aa4.88□□□□□ -1.63
LINC01239-202ENST00000436786 PARM1Q6UWI2 310 aa4.88□□□□□ -1.63
LINC01239-202ENST00000436786 NOSTRINQ8IVI9 506 aa4.88□□□□□ -1.63
LINC01239-202ENST00000436786 ZBTB8OSQ8IWT0 167 aa4.88□□□□□ -1.63
LINC01239-202ENST00000436786 SCUBE3Q8IX30 993 aa4.88□□□□□ -1.63
LINC01239-202ENST00000436786 MCPH1Q8NEM0 835 aa4.88□□□□□ -1.63
LINC01239-202ENST00000436786 LNX1Q8TBB1 728 aaPredicted RBP4.88□□□□□ -1.63
LINC01239-202ENST00000436786 KCNG4Q8TDN1 519 aa4.88□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms