RNA–Protein interactions for RNA: ENST00000435525.1

CTDSPL-204, Transcript of CTD small phosphatase like, humanhuman

TSL 3

Gene CTDSPL, Length 371 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDSPL-204ENST00000435525 DDX27Q96GQ7 796 aaKnown RBP17.92■□□□□ 0.46
CTDSPL-204ENST00000435525 SAMD11Q96NU1 681 aa17.92■□□□□ 0.46
CTDSPL-204ENST00000435525 DUSP9Q99956 384 aaKnown RBP17.92■□□□□ 0.46
CTDSPL-204ENST00000435525 TMEM175Q9BSA9 504 aa17.92■□□□□ 0.46
CTDSPL-204ENST00000435525 COLQQ9Y215 455 aaPredicted RBP17.92■□□□□ 0.46
CTDSPL-204ENST00000435525 PCDHB12Q9Y5F1 795 aa17.92■□□□□ 0.46
CTDSPL-204ENST00000435525 ALDH2P05091 517 aa17.91■□□□□ 0.46
CTDSPL-204ENST00000435525 CASP4P49662 377 aa17.91■□□□□ 0.46
CTDSPL-204ENST00000435525 GATMP50440 423 aa17.91■□□□□ 0.46
CTDSPL-204ENST00000435525 VAMP7P51809 220 aa17.91■□□□□ 0.46
CTDSPL-204ENST00000435525 RABGGTBP53611 331 aa17.91■□□□□ 0.46
CTDSPL-204ENST00000435525 LRIT3Q3SXY7 679 aa17.91■□□□□ 0.46
CTDSPL-204ENST00000435525 GLRA4Q5JXX5 417 aa17.91■□□□□ 0.46
CTDSPL-204ENST00000435525 JADE1Q6IE81 842 aa17.91■□□□□ 0.46
CTDSPL-204ENST00000435525 LRRC55Q6ZSA7 311 aa17.91■□□□□ 0.46
CTDSPL-204ENST00000435525 C11orf57Q6ZUT1 292 aaPredicted RBP17.91■□□□□ 0.46
CTDSPL-204ENST00000435525 SP7Q8TDD2 431 aaPredicted RBP17.91■□□□□ 0.46
CTDSPL-204ENST00000435525 ZNF558Q96NG5 402 aa17.91■□□□□ 0.46
CTDSPL-204ENST00000435525 CGRRF1Q99675 332 aa17.91■□□□□ 0.46
CTDSPL-204ENST00000435525 SLC28A3Q9HAS3 691 aa17.91■□□□□ 0.46
CTDSPL-204ENST00000435525 PDE11AQ9HCR9 933 aa17.91■□□□□ 0.46
CTDSPL-204ENST00000435525 NFE2L3Q9Y4A8 694 aa17.91■□□□□ 0.46
CTDSPL-204ENST00000435525 GRXCR1A8MXD5 290 aa17.9■□□□□ 0.46
CTDSPL-204ENST00000435525 GOLGA6L19H0YKK7 550 aa17.9■□□□□ 0.46
CTDSPL-204ENST00000435525 PTGESO14684 152 aa17.9■□□□□ 0.46
CTDSPL-204ENST00000435525 IKBKBO14920 756 aa17.9■□□□□ 0.46
CTDSPL-204ENST00000435525 ZC3H11AO75152 810 aaKnown RBP eCLIP17.9■□□□□ 0.46
CTDSPL-204ENST00000435525 PRKCSHP14314 528 aaPredicted RBP17.9■□□□□ 0.46
CTDSPL-204ENST00000435525 RPL9P32969 192 aaKnown RBP17.9■□□□□ 0.46
CTDSPL-204ENST00000435525 PPM1AP35813 382 aa17.9■□□□□ 0.46
CTDSPL-204ENST00000435525 SPAG1Q07617 926 aa17.9■□□□□ 0.46
CTDSPL-204ENST00000435525 BFSP1Q12934 665 aa17.9■□□□□ 0.46
CTDSPL-204ENST00000435525 TCERG1LQ5VWI1 586 aa17.9■□□□□ 0.46
CTDSPL-204ENST00000435525 ZSWIM2Q8NEG5 633 aa17.9■□□□□ 0.46
CTDSPL-204ENST00000435525 EEF2KMTQ96G04 330 aa17.9■□□□□ 0.46
CTDSPL-204ENST00000435525 PPP1R10Q96QC0 940 aaKnown RBP17.9■□□□□ 0.46
CTDSPL-204ENST00000435525 FUCA2Q9BTY2 467 aa17.9■□□□□ 0.46
CTDSPL-204ENST00000435525 COLEC11Q9BWP8 271 aa17.9■□□□□ 0.46
CTDSPL-204ENST00000435525 RC3H2Q9HBD1 1191 aaKnown RBP17.9■□□□□ 0.46
CTDSPL-204ENST00000435525 STK39Q9UEW8 545 aa17.9■□□□□ 0.46
CTDSPL-204ENST00000435525 PDE4DIPQ5VU43 2346 aa17.9■□□□□ 0.46
CTDSPL-204ENST00000435525 MICAL3Q7RTP6 2002 aa17.89■□□□□ 0.46
CTDSPL-204ENST00000435525 PHACTR2O75167 634 aa17.89■□□□□ 0.45
CTDSPL-204ENST00000435525 CDK11BP21127 795 aaKnown RBP17.89■□□□□ 0.45
CTDSPL-204ENST00000435525 PAX3P23760 479 aa17.89■□□□□ 0.45
CTDSPL-204ENST00000435525 GTF2H1P32780 548 aa17.89■□□□□ 0.45
CTDSPL-204ENST00000435525 MTIF2P46199 727 aaKnown RBP17.89■□□□□ 0.45
CTDSPL-204ENST00000435525 OR1G1P47890 313 aa17.89■□□□□ 0.45
CTDSPL-204ENST00000435525 ZNF445P59923 1031 aa17.89■□□□□ 0.45
CTDSPL-204ENST00000435525 CETN1Q12798 172 aa17.89■□□□□ 0.45
CTDSPL-204ENST00000435525 DCAF17Q5H9S7 520 aaPredicted RBP17.89■□□□□ 0.45
CTDSPL-204ENST00000435525 AOPEPQ8N6M6 819 aa17.89■□□□□ 0.45
CTDSPL-204ENST00000435525 PARD3BQ8TEW8 1205 aa17.89■□□□□ 0.45
CTDSPL-204ENST00000435525 PBX4Q9BYU1 374 aa17.89■□□□□ 0.45
CTDSPL-204ENST00000435525 INTS13Q9NVM9 706 aa17.89■□□□□ 0.45
CTDSPL-204ENST00000435525 FAN1Q9Y2M0 1017 aa17.89■□□□□ 0.45
CTDSPL-204ENST00000435525 TTC3P53804 2025 aa17.89■□□□□ 0.45
CTDSPL-204ENST00000435525 RBAK-RBAKDNI3L0D1 243 aa17.88■□□□□ 0.45
CTDSPL-204ENST00000435525 N4BP1O75113 896 aaKnown RBP17.88■□□□□ 0.45
CTDSPL-204ENST00000435525 CA3P07451 260 aa17.88■□□□□ 0.45
CTDSPL-204ENST00000435525 NFICP08651 508 aa17.88■□□□□ 0.45
CTDSPL-204ENST00000435525 BIRC3Q13489 604 aa17.88■□□□□ 0.45
CTDSPL-204ENST00000435525 TRPC3Q13507 836 aa17.88■□□□□ 0.45
CTDSPL-204ENST00000435525 PPP2R2DQ66LE6 453 aa17.88■□□□□ 0.45
CTDSPL-204ENST00000435525 FAM109BQ6ICB4 259 aaPredicted RBP17.88■□□□□ 0.45
CTDSPL-204ENST00000435525 GSTCDQ8NEC7 633 aa17.88■□□□□ 0.45
CTDSPL-204ENST00000435525 FAM200AQ8TCP9 573 aa17.88■□□□□ 0.45
CTDSPL-204ENST00000435525 TIFAQ96CG3 184 aa17.88■□□□□ 0.45
CTDSPL-204ENST00000435525 CNOT6LQ96LI5 555 aaKnown RBP17.88■□□□□ 0.45
CTDSPL-204ENST00000435525 TGS1Q96RS0 853 aaKnown RBP17.88■□□□□ 0.45
CTDSPL-204ENST00000435525 PLVAPQ9BX97 442 aa17.88■□□□□ 0.45
CTDSPL-204ENST00000435525 NRDE2Q9H7Z3 1164 aa17.88■□□□□ 0.45
CTDSPL-204ENST00000435525 MIOSQ9NXC5 875 aa17.88■□□□□ 0.45
CTDSPL-204ENST00000435525 DPP3Q9NY33 737 aa17.88■□□□□ 0.45
CTDSPL-204ENST00000435525 ITGA11Q9UKX5 1188 aa17.88■□□□□ 0.45
CTDSPL-204ENST00000435525 UTP18Q9Y5J1 556 aaKnown RBP eCLIP17.88■□□□□ 0.45
CTDSPL-204ENST00000435525 MRPL42Q9Y6G3 142 aaKnown RBP17.88■□□□□ 0.45
CTDSPL-204ENST00000435525 CEP290O15078 2479 aa17.88■□□□□ 0.45
CTDSPL-204ENST00000435525 ARHGEF37A1IGU5 675 aa17.87■□□□□ 0.45
CTDSPL-204ENST00000435525 TRAPPC3O43617 180 aa17.87■□□□□ 0.45
CTDSPL-204ENST00000435525 CLSTN1O94985 981 aa17.87■□□□□ 0.45
CTDSPL-204ENST00000435525 RB1P06400 928 aa17.87■□□□□ 0.45
CTDSPL-204ENST00000435525 DNAJB2P25686 324 aa17.87■□□□□ 0.45
CTDSPL-204ENST00000435525 EEF1GP26641 437 aaKnown RBP17.87■□□□□ 0.45
CTDSPL-204ENST00000435525 PNPLA4P41247 253 aa17.87■□□□□ 0.45
CTDSPL-204ENST00000435525 MARSP56192 900 aaKnown RBP17.87■□□□□ 0.45
CTDSPL-204ENST00000435525 BCAR1P56945 870 aa17.87■□□□□ 0.45
CTDSPL-204ENST00000435525 RBP5P82980 135 aa17.87■□□□□ 0.45
CTDSPL-204ENST00000435525 KRT17Q04695 432 aa17.87■□□□□ 0.45
CTDSPL-204ENST00000435525 DSC1Q08554 894 aa17.87■□□□□ 0.45
CTDSPL-204ENST00000435525 BMS1Q14692 1282 aaKnown RBP17.87■□□□□ 0.45
CTDSPL-204ENST00000435525 DCLRE1AQ6PJP8 1040 aa17.87■□□□□ 0.45
CTDSPL-204ENST00000435525 KCNT2Q6UVM3 1135 aa17.87■□□□□ 0.45
CTDSPL-204ENST00000435525 COLGALT2Q8IYK4 626 aa17.87■□□□□ 0.45
CTDSPL-204ENST00000435525 CCDC150Q8NCX0 1101 aa17.87■□□□□ 0.45
CTDSPL-204ENST00000435525 CLP1Q92989 425 aaKnown RBP17.87■□□□□ 0.45
CTDSPL-204ENST00000435525 ZNF560Q96MR9 790 aa17.87■□□□□ 0.45
CTDSPL-204ENST00000435525 ZMAT2Q96NC0 199 aaKnown RBP17.87■□□□□ 0.45
CTDSPL-204ENST00000435525 NKX2-4Q9H2Z4 354 aa17.87■□□□□ 0.45
CTDSPL-204ENST00000435525 SPG21Q9NZD8 308 aa17.87■□□□□ 0.45
Retrieved 100 of 20,778 RNA–protein pairs in 33.8 ms