RNA–Protein interactions for RNA: ENST00000434601.7

LINC00539-203, long intergenic non-protein coding RNA 539, humanhuman

TSL 5 BASIC

Gene LINC00539, Length 960 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00539-203ENST00000434601 GBP6Q6ZN66 633 aa12.22□□□□□ -0.45
LINC00539-203ENST00000434601 ZBTB33Q86T24 672 aa12.22□□□□□ -0.45
LINC00539-203ENST00000434601 RSPH3Q86UC2 560 aa12.22□□□□□ -0.45
LINC00539-203ENST00000434601 SERINC5Q86VE9 423 aa12.22□□□□□ -0.45
LINC00539-203ENST00000434601 TC2NQ8N9U0 490 aa12.22□□□□□ -0.45
LINC00539-203ENST00000434601 CCDC112Q8NEF3 446 aa12.22□□□□□ -0.45
LINC00539-203ENST00000434601 PLEKHO2Q8TD55 490 aa12.22□□□□□ -0.45
LINC00539-203ENST00000434601 PARD3BQ8TEW8 1205 aa12.22□□□□□ -0.45
LINC00539-203ENST00000434601 HLA-CQ95604 372 aa12.22□□□□□ -0.45
LINC00539-203ENST00000434601 ZNF830Q96NB3 372 aaPredicted RBP12.22□□□□□ -0.45
LINC00539-203ENST00000434601 RAD9AQ99638 391 aa12.22□□□□□ -0.45
LINC00539-203ENST00000434601 TCHPQ9BT92 498 aa12.22□□□□□ -0.45
LINC00539-203ENST00000434601 C1QTNF1Q9BXJ1 281 aa12.22□□□□□ -0.45
LINC00539-203ENST00000434601 CDT1Q9H211 546 aa12.22□□□□□ -0.45
LINC00539-203ENST00000434601 PDZD7Q9H5P4 517 aa12.22□□□□□ -0.45
LINC00539-203ENST00000434601 MMRN2Q9H8L6 949 aa12.22□□□□□ -0.45
LINC00539-203ENST00000434601 PTPRHQ9HD43 1115 aa12.22□□□□□ -0.45
LINC00539-203ENST00000434601 RBAKQ9NYW8 714 aaPredicted RBP12.22□□□□□ -0.45
LINC00539-203ENST00000434601 GCNT4Q9P109 453 aa12.22□□□□□ -0.45
LINC00539-203ENST00000434601 ZKSCAN5Q9Y2L8 839 aa12.22□□□□□ -0.45
LINC00539-203ENST00000434601 LRRIQ3A6PVS8 624 aaPredicted RBP12.21□□□□□ -0.45
LINC00539-203ENST00000434601 M0QZ92 97 aa12.21□□□□□ -0.45
LINC00539-203ENST00000434601 P4HA2O15460 535 aa12.21□□□□□ -0.45
LINC00539-203ENST00000434601 NRDCO43847 1150 aa12.21□□□□□ -0.45
LINC00539-203ENST00000434601 FAM189A1O60320 539 aa12.21□□□□□ -0.45
LINC00539-203ENST00000434601 STX10O60499 249 aa12.21□□□□□ -0.45
LINC00539-203ENST00000434601 MCF2P10911 925 aa12.21□□□□□ -0.45
LINC00539-203ENST00000434601 ARF4P18085 180 aaPredicted RBP12.21□□□□□ -0.45
LINC00539-203ENST00000434601 ACOT2P49753 483 aa12.21□□□□□ -0.45
LINC00539-203ENST00000434601 MXI1P50539 228 aa12.21□□□□□ -0.45
LINC00539-203ENST00000434601 CRYBB1P53674 252 aaPredicted RBP12.21□□□□□ -0.45
LINC00539-203ENST00000434601 ADKP55263 362 aaKnown RBP12.21□□□□□ -0.45
LINC00539-203ENST00000434601 MRPS6P82932 125 aaKnown RBP12.21□□□□□ -0.45
LINC00539-203ENST00000434601 CCZ1BP86790 482 aa12.21□□□□□ -0.45
LINC00539-203ENST00000434601 CCZ1P86791 482 aaPredicted RBP12.21□□□□□ -0.45
LINC00539-203ENST00000434601 TFF2Q03403 129 aa12.21□□□□□ -0.45
LINC00539-203ENST00000434601 PPP3CAQ08209 521 aa12.21□□□□□ -0.45
LINC00539-203ENST00000434601 PSMD6Q15008 389 aa12.21□□□□□ -0.45
LINC00539-203ENST00000434601 CBWD6Q4V339 395 aa12.21□□□□□ -0.45
LINC00539-203ENST00000434601 CBWD3Q5JTY5 395 aa12.21□□□□□ -0.45
LINC00539-203ENST00000434601 CBWD5Q5RIA9 395 aa12.21□□□□□ -0.45
LINC00539-203ENST00000434601 ZBTB41Q5SVQ8 909 aa12.21□□□□□ -0.45
LINC00539-203ENST00000434601 CRELD2Q6UXH1 353 aaPredicted RBP12.21□□□□□ -0.45
LINC00539-203ENST00000434601 CATSPER4Q7RTX7 472 aa12.21□□□□□ -0.45
LINC00539-203ENST00000434601 RPAINQ86UA6 219 aa12.21□□□□□ -0.45
LINC00539-203ENST00000434601 BRSK2Q8IWQ3 736 aa12.21□□□□□ -0.45
LINC00539-203ENST00000434601 NEK11Q8NG66 645 aa12.21□□□□□ -0.45
LINC00539-203ENST00000434601 CPLX3Q8WVH0 158 aa12.21□□□□□ -0.45
LINC00539-203ENST00000434601 CCDC127Q96BQ5 260 aa12.21□□□□□ -0.45
LINC00539-203ENST00000434601 CCDC51Q96ER9 411 aa12.21□□□□□ -0.45
LINC00539-203ENST00000434601 CPB2Q96IY4 423 aa12.21□□□□□ -0.45
LINC00539-203ENST00000434601 CRACR2AQ9BSW2 395 aa12.21□□□□□ -0.45
LINC00539-203ENST00000434601 CDHR5Q9HBB8 845 aa12.21□□□□□ -0.45
LINC00539-203ENST00000434601 FAM207AQ9NSI2 230 aaPredicted RBP12.21□□□□□ -0.45
LINC00539-203ENST00000434601 CAPN11Q9UMQ6 739 aa12.21□□□□□ -0.45
LINC00539-203ENST00000434601 TRPV2Q9Y5S1 764 aa12.21□□□□□ -0.45
LINC00539-203ENST00000434601 RALGAPA2Q2PPJ7 1873 aa12.21□□□□□ -0.46
LINC00539-203ENST00000434601 COL4A4P53420 1690 aaPredicted RBP12.2□□□□□ -0.46
LINC00539-203ENST00000434601 TTC26A0AVF1 554 aa12.2□□□□□ -0.46
LINC00539-203ENST00000434601 EPOPA6NHQ4 379 aa12.2□□□□□ -0.46
LINC00539-203ENST00000434601 PMM2O15305 246 aa12.2□□□□□ -0.46
LINC00539-203ENST00000434601 NBNO60934 754 aa12.2□□□□□ -0.46
LINC00539-203ENST00000434601 GJB5O95377 273 aa12.2□□□□□ -0.46
LINC00539-203ENST00000434601 FGFR4P22455 802 aa12.2□□□□□ -0.46
LINC00539-203ENST00000434601 EIF4BP23588 611 aaKnown RBP12.2□□□□□ -0.46
LINC00539-203ENST00000434601 PON1P27169 355 aa12.2□□□□□ -0.46
LINC00539-203ENST00000434601 GTF2H1P32780 548 aa12.2□□□□□ -0.46
LINC00539-203ENST00000434601 KRT9P35527 623 aa12.2□□□□□ -0.46
LINC00539-203ENST00000434601 GCLMP48507 274 aa12.2□□□□□ -0.46
LINC00539-203ENST00000434601 CETN1Q12798 172 aa12.2□□□□□ -0.46
LINC00539-203ENST00000434601 APBB1IPQ7Z5R6 666 aaPredicted RBP12.2□□□□□ -0.46
LINC00539-203ENST00000434601 ZSCAN30Q86W11 494 aa12.2□□□□□ -0.46
LINC00539-203ENST00000434601 CDR2LQ86X02 465 aaPredicted RBP12.2□□□□□ -0.46
LINC00539-203ENST00000434601 DHX38Q92620 1227 aaKnown RBP12.2□□□□□ -0.46
LINC00539-203ENST00000434601 WNT8BQ93098 351 aa12.2□□□□□ -0.46
LINC00539-203ENST00000434601 PANX2Q96RD6 677 aa12.2□□□□□ -0.46
LINC00539-203ENST00000434601 TGS1Q96RS0 853 aaKnown RBP12.2□□□□□ -0.46
LINC00539-203ENST00000434601 FNBP1Q96RU3 617 aa12.2□□□□□ -0.46
LINC00539-203ENST00000434601 ADPGKQ9BRR6 497 aa12.2□□□□□ -0.46
LINC00539-203ENST00000434601 CELF4Q9BZC1 486 aaKnown RBP12.2□□□□□ -0.46
LINC00539-203ENST00000434601 GANQ9H2C0 597 aa12.2□□□□□ -0.46
LINC00539-203ENST00000434601 TMEM8AQ9HCN3 771 aa12.2□□□□□ -0.46
LINC00539-203ENST00000434601 PLCB1Q9NQ66 1216 aa12.2□□□□□ -0.46
LINC00539-203ENST00000434601 ABHD10Q9NUJ1 306 aa12.2□□□□□ -0.46
LINC00539-203ENST00000434601 AGPAT5Q9NUQ2 364 aa12.2□□□□□ -0.46
LINC00539-203ENST00000434601 CPSF3Q9UKF6 684 aaKnown RBP12.2□□□□□ -0.46
LINC00539-203ENST00000434601 LUC7L2Q9Y383 392 aaKnown RBP12.2□□□□□ -0.46
LINC00539-203ENST00000434601 CDY2AQ9Y6F7 541 aa12.2□□□□□ -0.46
LINC00539-203ENST00000434601 ANK1P16157 1881 aa12.19□□□□□ -0.46
LINC00539-203ENST00000434601 A0A1B0GUA9 196 aa12.19□□□□□ -0.46
LINC00539-203ENST00000434601 EPHB6O15197 1021 aa12.19□□□□□ -0.46
LINC00539-203ENST00000434601 DLATP10515 647 aaKnown RBP12.19□□□□□ -0.46
LINC00539-203ENST00000434601 AXLP30530 894 aa12.19□□□□□ -0.46
LINC00539-203ENST00000434601 TNFSF9P41273 254 aa12.19□□□□□ -0.46
LINC00539-203ENST00000434601 KCNQ1P51787 676 aa12.19□□□□□ -0.46
LINC00539-203ENST00000434601 ERVK-21P61565 698 aa12.19□□□□□ -0.46
LINC00539-203ENST00000434601 CLDN10P78369 228 aa12.19□□□□□ -0.46
LINC00539-203ENST00000434601 ZBED6P86452 979 aa12.19□□□□□ -0.46
LINC00539-203ENST00000434601 NCBP1Q09161 790 aaKnown RBP12.19□□□□□ -0.46
LINC00539-203ENST00000434601 MGAT3Q09327 533 aa12.19□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 34.1 ms