RNA–Protein interactions for RNA: ENST00000434472.6

CD44-210, Transcript of CD44 molecule (Indian blood group), humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CD44, Length 1,634 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-210ENST00000434472 CATSPERGQ6ZRH7 1159 aa11.15□□□□□ -0.62
CD44-210ENST00000434472 CCDC60Q8IWA6 550 aaPredicted RBP11.15□□□□□ -0.62
CD44-210ENST00000434472 MCOLN2Q8IZK6 566 aa11.15□□□□□ -0.62
CD44-210ENST00000434472 CHST13Q8NET6 341 aa11.15□□□□□ -0.62
CD44-210ENST00000434472 DNERQ8NFT8 737 aa11.15□□□□□ -0.62
CD44-210ENST00000434472 DEPTORQ8TB45 409 aa11.15□□□□□ -0.62
CD44-210ENST00000434472 PSPC1Q8WXF1 523 aaKnown RBP11.15□□□□□ -0.62
CD44-210ENST00000434472 ART4Q93070 314 aa11.15□□□□□ -0.62
CD44-210ENST00000434472 WHRNQ9P202 907 aa11.15□□□□□ -0.62
CD44-210ENST00000434472 AGO2Q9UKV8 859 aaKnown RBP11.15□□□□□ -0.62
CD44-210ENST00000434472 PPME1Q9Y570 386 aa11.15□□□□□ -0.62
CD44-210ENST00000434472 PARP14Q460N5 1801 aa11.14□□□□□ -0.63
CD44-210ENST00000434472 PHIPQ8WWQ0 1821 aa11.14□□□□□ -0.63
CD44-210ENST00000434472 ADGRA3Q8IWK6 1321 aa11.14□□□□□ -0.63
CD44-210ENST00000434472 LTBP3Q9NS15 1303 aa11.14□□□□□ -0.63
CD44-210ENST00000434472 TRAPPC3O43617 180 aa11.14□□□□□ -0.63
CD44-210ENST00000434472 RGS20O76081 388 aa11.14□□□□□ -0.63
CD44-210ENST00000434472 ATG7O95352 703 aa11.14□□□□□ -0.63
CD44-210ENST00000434472 AGTP01019 485 aa11.14□□□□□ -0.63
CD44-210ENST00000434472 HLA-DRAP01903 254 aa11.14□□□□□ -0.63
CD44-210ENST00000434472 OATP04181 439 aa11.14□□□□□ -0.63
CD44-210ENST00000434472 CYP1A1P04798 512 aaPredicted RBP11.14□□□□□ -0.63
CD44-210ENST00000434472 RARGP13631 454 aa11.14□□□□□ -0.63
CD44-210ENST00000434472 TBXAS1P24557 533 aaPredicted RBP11.14□□□□□ -0.63
CD44-210ENST00000434472 PIK3CAP42336 1068 aa11.14□□□□□ -0.63
CD44-210ENST00000434472 NSFP46459 744 aaKnown RBP11.14□□□□□ -0.63
CD44-210ENST00000434472 RPL21P46778 160 aaKnown RBP11.14□□□□□ -0.63
CD44-210ENST00000434472 AP3M2P53677 418 aa11.14□□□□□ -0.63
CD44-210ENST00000434472 HMGCS2P54868 508 aa11.14□□□□□ -0.63
CD44-210ENST00000434472 MAGOHP61326 146 aaKnown RBP11.14□□□□□ -0.63
CD44-210ENST00000434472 CAV1Q03135 178 aa11.14□□□□□ -0.63
CD44-210ENST00000434472 TMEM132BQ14DG7 1078 aa11.14□□□□□ -0.63
CD44-210ENST00000434472 PPP1R7Q15435 360 aa11.14□□□□□ -0.63
CD44-210ENST00000434472 SIX1Q15475 284 aaPredicted RBP11.14□□□□□ -0.63
CD44-210ENST00000434472 STXBP2Q15833 593 aa11.14□□□□□ -0.63
CD44-210ENST00000434472 MTERF2Q49AM1 385 aa11.14□□□□□ -0.63
CD44-210ENST00000434472 TTC27Q6P3X3 843 aa11.14□□□□□ -0.63
CD44-210ENST00000434472 TRMT10CQ7L0Y3 403 aaKnown RBP11.14□□□□□ -0.63
CD44-210ENST00000434472 DHX30Q7L2E3 1194 aaKnown RBP eCLIP11.14□□□□□ -0.63
CD44-210ENST00000434472 TAS1R3Q7RTX0 852 aa11.14□□□□□ -0.63
CD44-210ENST00000434472 OTUD6BQ8N6M0 293 aa11.14□□□□□ -0.63
CD44-210ENST00000434472 FBXO25Q8TCJ0 367 aa11.14□□□□□ -0.63
CD44-210ENST00000434472 WNK4Q96J92 1243 aa11.14□□□□□ -0.63
CD44-210ENST00000434472 VCPIP1Q96JH7 1222 aa11.14□□□□□ -0.63
CD44-210ENST00000434472 WRNIP1Q96S55 665 aa11.14□□□□□ -0.63
CD44-210ENST00000434472 ROPN1BQ9BZX4 212 aaPredicted RBP11.14□□□□□ -0.63
CD44-210ENST00000434472 PDGFDQ9GZP0 370 aaPredicted RBP11.14□□□□□ -0.63
CD44-210ENST00000434472 TMEM134Q9H6X4 195 aa11.14□□□□□ -0.63
CD44-210ENST00000434472 ROPN1Q9HAT0 212 aaPredicted RBP11.14□□□□□ -0.63
CD44-210ENST00000434472 A1CFQ9NQ94 594 aaKnown RBP11.14□□□□□ -0.63
CD44-210ENST00000434472 ZNF302Q9NR11 478 aa11.14□□□□□ -0.63
CD44-210ENST00000434472 ANAPC7Q9UJX3 599 aa11.14□□□□□ -0.63
CD44-210ENST00000434472 SCAF8Q9UPN6 1271 aaKnown RBP11.14□□□□□ -0.63
CD44-210ENST00000434472 PPP2R3BQ9Y5P8 575 aa11.14□□□□□ -0.63
CD44-210ENST00000434472 MAFBQ9Y5Q3 323 aaPredicted RBP11.14□□□□□ -0.63
CD44-210ENST00000434472 ARID2Q68CP9 1835 aa11.14□□□□□ -0.63
CD44-210ENST00000434472 MEFVO15553 781 aaPredicted RBP11.13□□□□□ -0.63
CD44-210ENST00000434472 EGFRP00533 1210 aa11.13□□□□□ -0.63
CD44-210ENST00000434472 C4BPAP04003 597 aaKnown RBP11.13□□□□□ -0.63
CD44-210ENST00000434472 TNNI1P19237 187 aa11.13□□□□□ -0.63
CD44-210ENST00000434472 ITIH2P19823 946 aa11.13□□□□□ -0.63
CD44-210ENST00000434472 CENPCQ03188 943 aa11.13□□□□□ -0.63
CD44-210ENST00000434472 DRP2Q13474 957 aa11.13□□□□□ -0.63
CD44-210ENST00000434472 SGO2Q562F6 1265 aa11.13□□□□□ -0.63
CD44-210ENST00000434472 NOL9Q5SY16 702 aaKnown RBP11.13□□□□□ -0.63
CD44-210ENST00000434472 SAMD7Q7Z3H4 446 aa11.13□□□□□ -0.63
CD44-210ENST00000434472 ZNF516Q92618 1163 aa11.13□□□□□ -0.63
CD44-210ENST00000434472 CGRRF1Q99675 332 aa11.13□□□□□ -0.63
CD44-210ENST00000434472 PORCNQ9H237 461 aa11.13□□□□□ -0.63
CD44-210ENST00000434472 RABEP2Q9H5N1 569 aa11.13□□□□□ -0.63
CD44-210ENST00000434472 MRPL47Q9HD33 250 aaKnown RBP11.13□□□□□ -0.63
CD44-210ENST00000434472 ACP6Q9NPH0 428 aa11.13□□□□□ -0.63
CD44-210ENST00000434472 UTP3Q9NQZ2 479 aaKnown RBP eCLIP11.13□□□□□ -0.635e-38■■■■■ 698.7
CD44-210ENST00000434472 NRBP2Q9NSY0 501 aa11.13□□□□□ -0.63
CD44-210ENST00000434472 SCINQ9Y6U3 715 aa11.13□□□□□ -0.63
CD44-210ENST00000434472 C5orf60A6NFR6 353 aa11.13□□□□□ -0.63
CD44-210ENST00000434472 K7ERI5 159 aa11.13□□□□□ -0.63
CD44-210ENST00000434472 NFKBIEO00221 500 aa11.13□□□□□ -0.63
CD44-210ENST00000434472 RGS16O15492 202 aaPredicted RBP11.13□□□□□ -0.63
CD44-210ENST00000434472 PSTPIP1O43586 416 aa11.13□□□□□ -0.63
CD44-210ENST00000434472 PROSCO94903 275 aa11.13□□□□□ -0.63
CD44-210ENST00000434472 ARL2P36404 184 aa11.13□□□□□ -0.63
CD44-210ENST00000434472 CETN2P41208 172 aa11.13□□□□□ -0.63
CD44-210ENST00000434472 SOX10P56693 466 aa11.13□□□□□ -0.63
CD44-210ENST00000434472 CUL2Q13617 745 aa11.13□□□□□ -0.63
CD44-210ENST00000434472 PTK6Q13882 451 aa11.13□□□□□ -0.63
CD44-210ENST00000434472 CEP128Q6ZU80 1094 aa11.13□□□□□ -0.63
CD44-210ENST00000434472 ZDHHC14Q8IZN3 488 aa11.13□□□□□ -0.63
CD44-210ENST00000434472 MICALL1Q8N3F8 863 aa11.13□□□□□ -0.63
CD44-210ENST00000434472 BBOF1Q8ND07 529 aa11.13□□□□□ -0.63
CD44-210ENST00000434472 GADD45GIP1Q8TAE8 222 aaPredicted RBP11.13□□□□□ -0.63
CD44-210ENST00000434472 ZKSCAN4Q969J2 545 aaPredicted RBP11.13□□□□□ -0.63
CD44-210ENST00000434472 RNF25Q96BH1 459 aaPredicted RBP11.13□□□□□ -0.63
CD44-210ENST00000434472 BTBD6Q96KE9 485 aa11.13□□□□□ -0.63
CD44-210ENST00000434472 NIFKQ9BYG3 293 aaKnown RBP11.13□□□□□ -0.63
CD44-210ENST00000434472 EPB41L4BQ9H329 900 aa11.13□□□□□ -0.63
CD44-210ENST00000434472 DHX33Q9H6R0 707 aaKnown RBP11.13□□□□□ -0.63
CD44-210ENST00000434472 PPANQ9NQ55 473 aaKnown RBP11.13□□□□□ -0.63
CD44-210ENST00000434472 FBXO40Q9UH90 709 aa11.13□□□□□ -0.63
CD44-210ENST00000434472 GJA3Q9Y6H8 435 aa11.13□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 24.5 ms