RNA–Protein interactions for RNA: ENST00000433888.5

PTPN4-205, Transcript of protein tyrosine phosphatase, non-receptor type 4, humanhuman

TSL 3

Gene PTPN4, Length 954 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN4-205ENST00000433888 CXADRP78310 365 aa5.37□□□□□ -1.55
PTPN4-205ENST00000433888 CCT2P78371 535 aaKnown RBP5.37□□□□□ -1.55
PTPN4-205ENST00000433888 MXRA7P84157 204 aa5.37□□□□□ -1.55
PTPN4-205ENST00000433888 NHLH1Q02575 133 aa5.37□□□□□ -1.55
PTPN4-205ENST00000433888 UBXN2BQ14CS0 331 aa5.37□□□□□ -1.55
PTPN4-205ENST00000433888 SPDYE7PQ495Y7 208 aa5.37□□□□□ -1.55
PTPN4-205ENST00000433888 THNSL2Q86YJ6 484 aa5.37□□□□□ -1.55
PTPN4-205ENST00000433888 FAM43AQ8N2R8 423 aa5.37□□□□□ -1.55
PTPN4-205ENST00000433888 PQLC1Q8N2U9 271 aa5.37□□□□□ -1.55
PTPN4-205ENST00000433888 STON2Q8WXE9 905 aa5.37□□□□□ -1.55
PTPN4-205ENST00000433888 AUTS2Q8WXX7 1259 aa5.37□□□□□ -1.55
PTPN4-205ENST00000433888 NELL1Q92832 810 aa5.37□□□□□ -1.55
PTPN4-205ENST00000433888 TTC1Q99614 292 aa5.37□□□□□ -1.55
PTPN4-205ENST00000433888 RSAD1Q9HA92 442 aa5.37□□□□□ -1.55
PTPN4-205ENST00000433888 IFT122Q9HBG6 1241 aa5.37□□□□□ -1.55
PTPN4-205ENST00000433888 VTA1Q9NP79 307 aa5.37□□□□□ -1.55
PTPN4-205ENST00000433888 SEMA4GQ9NTN9 838 aa5.37□□□□□ -1.55
PTPN4-205ENST00000433888 RBM12Q9NTZ6 932 aaKnown RBP5.37□□□□□ -1.55
PTPN4-205ENST00000433888 SLC23A1Q9UHI7 598 aa5.37□□□□□ -1.55
PTPN4-205ENST00000433888 NOX1Q9Y5S8 564 aa5.37□□□□□ -1.55
PTPN4-205ENST00000433888 MATN4O95460 622 aa5.36□□□□□ -1.55
PTPN4-205ENST00000433888 POMCP01189 267 aa5.36□□□□□ -1.55
PTPN4-205ENST00000433888 IL2RBP14784 551 aa5.36□□□□□ -1.55
PTPN4-205ENST00000433888 SLC6A2P23975 617 aa5.36□□□□□ -1.55
PTPN4-205ENST00000433888 CYP2A13Q16696 494 aa5.36□□□□□ -1.55
PTPN4-205ENST00000433888 ANO4Q32M45 955 aa5.36□□□□□ -1.55
PTPN4-205ENST00000433888 SEM1Q6ZVN7 128 aa5.36□□□□□ -1.55
PTPN4-205ENST00000433888 DDX46Q7L014 1031 aaKnown RBP5.36□□□□□ -1.55
PTPN4-205ENST00000433888 TGFBRAP1Q8WUH2 860 aa5.36□□□□□ -1.55
PTPN4-205ENST00000433888 PDLIM2Q96JY6 352 aa5.36□□□□□ -1.55
PTPN4-205ENST00000433888 DUSP26Q9BV47 211 aa5.36□□□□□ -1.55
PTPN4-205ENST00000433888 RNPEPQ9H4A4 650 aa5.36□□□□□ -1.55
PTPN4-205ENST00000433888 GALNT9Q9HCQ5 603 aa5.36□□□□□ -1.55
PTPN4-205ENST00000433888 FRMD4BQ9Y2L6 1034 aa5.36□□□□□ -1.55
PTPN4-205ENST00000433888 AATKQ6ZMQ8 1374 aa5.36□□□□□ -1.55
PTPN4-205ENST00000433888 COL3A1P02461 1466 aaPredicted RBP5.35□□□□□ -1.55
PTPN4-205ENST00000433888 FPR1P21462 350 aa5.35□□□□□ -1.55
PTPN4-205ENST00000433888 MCAMP43121 646 aa5.35□□□□□ -1.55
PTPN4-205ENST00000433888 ALDH1A3P47895 512 aa5.35□□□□□ -1.55
PTPN4-205ENST00000433888 GYS2P54840 703 aa5.35□□□□□ -1.55
PTPN4-205ENST00000433888 SEPT2Q15019 361 aa5.35□□□□□ -1.55
PTPN4-205ENST00000433888 GJC2Q5T442 439 aaPredicted RBP5.35□□□□□ -1.55
PTPN4-205ENST00000433888 RNF31Q96EP0 1072 aa5.35□□□□□ -1.55
PTPN4-205ENST00000433888 MYOCQ99972 504 aa5.35□□□□□ -1.55
PTPN4-205ENST00000433888 REXO4Q9GZR2 422 aaKnown RBP5.35□□□□□ -1.55
PTPN4-205ENST00000433888 QRSL1Q9H0R6 528 aaKnown RBP5.35□□□□□ -1.55
PTPN4-205ENST00000433888 DMRT3Q9NQL9 472 aa5.35□□□□□ -1.55
PTPN4-205ENST00000433888 FBXO34Q9NWN3 711 aa5.35□□□□□ -1.55
PTPN4-205ENST00000433888 TESQ9UGI8 421 aaKnown RBP5.35□□□□□ -1.55
PTPN4-205ENST00000433888 KCNE5Q9UJ90 142 aa5.35□□□□□ -1.55
PTPN4-205ENST00000433888 APOBEC2Q9Y235 224 aaKnown RBP5.35□□□□□ -1.55
PTPN4-205ENST00000433888 GOLGA8AA7E2F4 631 aa5.34□□□□□ -1.55
PTPN4-205ENST00000433888 ZFPL1O95159 310 aa5.34□□□□□ -1.55
PTPN4-205ENST00000433888 C1RP00736 705 aa5.34□□□□□ -1.55
PTPN4-205ENST00000433888 RAP2AP10114 183 aa5.34□□□□□ -1.55
PTPN4-205ENST00000433888 ATP5JP18859 108 aa5.34□□□□□ -1.55
PTPN4-205ENST00000433888 SLC6A9P48067 706 aa5.34□□□□□ -1.55
PTPN4-205ENST00000433888 ATXN1P54253 815 aaKnown RBP5.34□□□□□ -1.55
PTPN4-205ENST00000433888 CACNA2D1P54289 1103 aa5.34□□□□□ -1.55
PTPN4-205ENST00000433888 FOXF2Q12947 444 aa5.34□□□□□ -1.55
PTPN4-205ENST00000433888 STRN3Q13033 797 aa5.34□□□□□ -1.55
PTPN4-205ENST00000433888 MUM1L1Q5H9M0 696 aa5.34□□□□□ -1.55
PTPN4-205ENST00000433888 CASKIN2Q8WXE0 1202 aa5.34□□□□□ -1.55
PTPN4-205ENST00000433888 LDAHQ9H6V9 325 aa5.34□□□□□ -1.55
PTPN4-205ENST00000433888 UNKLQ9H9P5 680 aaKnown RBP5.34□□□□□ -1.55
PTPN4-205ENST00000433888 MOCS1Q9NZB8 636 aa5.34□□□□□ -1.55
PTPN4-205ENST00000433888 USP25Q9UHP3 1055 aa5.34□□□□□ -1.55
PTPN4-205ENST00000433888 MYADML2A6NDP7 307 aa5.33□□□□□ -1.56
PTPN4-205ENST00000433888 RBMXL2O75526 392 aaKnown RBP5.33□□□□□ -1.56
PTPN4-205ENST00000433888 GPANK1O95872 356 aa5.33□□□□□ -1.56
PTPN4-205ENST00000433888 CKBP12277 381 aa5.33□□□□□ -1.56
PTPN4-205ENST00000433888 MTHFD2P13995 350 aa5.33□□□□□ -1.56
PTPN4-205ENST00000433888 PCSK1P29120 753 aa5.33□□□□□ -1.56
PTPN4-205ENST00000433888 GPR3P46089 330 aa5.33□□□□□ -1.56
PTPN4-205ENST00000433888 HSD11B2P80365 405 aa5.33□□□□□ -1.56
PTPN4-205ENST00000433888 FAM180AQ6UWF9 173 aa5.33□□□□□ -1.56
PTPN4-205ENST00000433888 GLCCI1Q86VQ1 547 aa5.33□□□□□ -1.56
PTPN4-205ENST00000433888 LNX2Q8N448 690 aa5.33□□□□□ -1.56
PTPN4-205ENST00000433888 UBR7Q8N806 425 aa5.33□□□□□ -1.56
PTPN4-205ENST00000433888 Q8NA96 180 aa5.33□□□□□ -1.56
PTPN4-205ENST00000433888 ANKS1AQ92625 1134 aa5.33□□□□□ -1.56
PTPN4-205ENST00000433888 UHRF1Q96T88 793 aaPredicted RBP5.33□□□□□ -1.56
PTPN4-205ENST00000433888 SPATA5L1Q9BVQ7 753 aa5.33□□□□□ -1.56
PTPN4-205ENST00000433888 LANCL2Q9NS86 450 aa5.33□□□□□ -1.56
PTPN4-205ENST00000433888 TBCCD1Q9NVR7 557 aa5.33□□□□□ -1.56
PTPN4-205ENST00000433888 AJAP1Q9UKB5 411 aaPredicted RBP5.33□□□□□ -1.56
PTPN4-205ENST00000433888 LRRC3CA6NJW4 275 aa5.32□□□□□ -1.56
PTPN4-205ENST00000433888 VAV2P52735 878 aa5.32□□□□□ -1.56
PTPN4-205ENST00000433888 PER3P56645 1201 aa5.32□□□□□ -1.56
PTPN4-205ENST00000433888 SCAND1P57086 179 aa5.32□□□□□ -1.56
PTPN4-205ENST00000433888 MALLQ13021 153 aa5.32□□□□□ -1.56
PTPN4-205ENST00000433888 TOR2AQ5JU69 321 aa5.32□□□□□ -1.56
PTPN4-205ENST00000433888 PAPD7Q5XG87 772 aaKnown RBP5.32□□□□□ -1.56
PTPN4-205ENST00000433888 ZNF529Q6P280 563 aa5.32□□□□□ -1.56
PTPN4-205ENST00000433888 AIFM2Q9BRQ8 373 aa5.32□□□□□ -1.56
PTPN4-205ENST00000433888 ACE2Q9BYF1 805 aaPredicted RBP5.32□□□□□ -1.56
PTPN4-205ENST00000433888 SENP6Q9GZR1 1112 aaPredicted RBP5.32□□□□□ -1.56
PTPN4-205ENST00000433888 WDR26Q9H7D7 661 aa5.32□□□□□ -1.56
PTPN4-205ENST00000433888 CASS4Q9NQ75 786 aa5.32□□□□□ -1.56
PTPN4-205ENST00000433888 HSFX1Q9UBD0 423 aa5.32□□□□□ -1.56
Retrieved 100 of 20,778 RNA–protein pairs in 22.7 ms