RNA–Protein interactions for RNA: ENST00000433297.2

HMGCS1-202, Transcript of 3-hydroxy-3-methylglutaryl-CoA synthase 1, humanhuman

APPRIS P1 TSL 5 BASIC

Gene HMGCS1, Length 3,466 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCS1-202ENST00000433297 WASF2Q9Y6W5 498 aa12.28□□□□□ -0.44
HMGCS1-202ENST00000433297 ADGRA3Q8IWK6 1321 aa12.28□□□□□ -0.44
HMGCS1-202ENST00000433297 MYO3BQ8WXR4 1341 aa12.28□□□□□ -0.44
HMGCS1-202ENST00000433297 DLEC1Q9Y238 1755 aa12.28□□□□□ -0.44
HMGCS1-202ENST00000433297 COL5A2P05997 1499 aaPredicted RBP12.28□□□□□ -0.44
HMGCS1-202ENST00000433297 ARAP2Q8WZ64 1704 aa12.28□□□□□ -0.44
HMGCS1-202ENST00000433297 A0A1W2PPM1 405 aa12.28□□□□□ -0.44
HMGCS1-202ENST00000433297 MAGEA13PA6NCF6 341 aa12.28□□□□□ -0.44
HMGCS1-202ENST00000433297 TJP3O95049 919 aa12.28□□□□□ -0.44
HMGCS1-202ENST00000433297 CALCAP01258 141 aa12.28□□□□□ -0.44
HMGCS1-202ENST00000433297 AKR1B1P15121 316 aa12.28□□□□□ -0.44
HMGCS1-202ENST00000433297 MAGEA4P43358 317 aa12.28□□□□□ -0.44
HMGCS1-202ENST00000433297 SLC34A1Q06495 639 aa12.28□□□□□ -0.44
HMGCS1-202ENST00000433297 CYP1B1Q16678 543 aa12.28□□□□□ -0.44
HMGCS1-202ENST00000433297 TBC1D10BQ4KMP7 808 aaPredicted RBP12.28□□□□□ -0.44
HMGCS1-202ENST00000433297 ASPRV1Q53RT3 343 aa12.28□□□□□ -0.44
HMGCS1-202ENST00000433297 CADPS2Q86UW7 1296 aa12.28□□□□□ -0.44
HMGCS1-202ENST00000433297 WDR60Q8WVS4 1066 aa12.28□□□□□ -0.44
HMGCS1-202ENST00000433297 KLF6Q99612 283 aaPredicted RBP12.28□□□□□ -0.44
HMGCS1-202ENST00000433297 TMX4Q9H1E5 349 aaPredicted RBP12.28□□□□□ -0.44
HMGCS1-202ENST00000433297 HEY2Q9UBP5 337 aa12.28□□□□□ -0.44
HMGCS1-202ENST00000433297 R3HDM2Q9Y2K5 976 aaKnown RBP12.28□□□□□ -0.44
HMGCS1-202ENST00000433297 hCG_2014768A0A024R1R8 64 aa12.27□□□□□ -0.44
HMGCS1-202ENST00000433297 hCG_1984214I3L0E3 225 aa12.27□□□□□ -0.44
HMGCS1-202ENST00000433297 LDHCP07864 332 aa12.27□□□□□ -0.44
HMGCS1-202ENST00000433297 PLS3P13797 630 aa12.27□□□□□ -0.44
HMGCS1-202ENST00000433297 GSTO1P78417 241 aa12.27□□□□□ -0.44
HMGCS1-202ENST00000433297 STAT4Q14765 748 aa12.27□□□□□ -0.44
HMGCS1-202ENST00000433297 CLNKQ7Z7G1 428 aa12.27□□□□□ -0.44
HMGCS1-202ENST00000433297 ZNF713Q8N859 430 aaPredicted RBP12.27□□□□□ -0.44
HMGCS1-202ENST00000433297 FAM81AQ8TBF8 368 aa12.27□□□□□ -0.44
HMGCS1-202ENST00000433297 C10orf82Q8WW14 230 aa12.27□□□□□ -0.44
HMGCS1-202ENST00000433297 OCEL1Q9H607 264 aa12.27□□□□□ -0.44
HMGCS1-202ENST00000433297 ARL8BQ9NVJ2 186 aa12.27□□□□□ -0.44
HMGCS1-202ENST00000433297 MTMR4Q9NYA4 1195 aa12.27□□□□□ -0.44
HMGCS1-202ENST00000433297 SH3BP1Q9Y3L3 701 aa12.27□□□□□ -0.44
HMGCS1-202ENST00000433297 NUMBLQ9Y6R0 609 aa12.27□□□□□ -0.44
HMGCS1-202ENST00000433297 EMSYQ7Z589 1322 aa12.27□□□□□ -0.44
HMGCS1-202ENST00000433297 TAF1P21675 1872 aa12.27□□□□□ -0.45
HMGCS1-202ENST00000433297 LRP5O75197 1615 aa12.27□□□□□ -0.45
HMGCS1-202ENST00000433297 C2orf71A6NGG8 1288 aa12.27□□□□□ -0.45
HMGCS1-202ENST00000433297 CCDC22O60826 627 aa12.27□□□□□ -0.45
HMGCS1-202ENST00000433297 USH1GQ495M9 461 aa12.27□□□□□ -0.45
HMGCS1-202ENST00000433297 CFAP157Q5JU67 520 aa12.27□□□□□ -0.45
HMGCS1-202ENST00000433297 RHBDF2Q6PJF5 856 aa12.27□□□□□ -0.45
HMGCS1-202ENST00000433297 ZNF804AQ7Z570 1209 aa12.27□□□□□ -0.45
HMGCS1-202ENST00000433297 SLC47A2Q86VL8 602 aa12.27□□□□□ -0.45
HMGCS1-202ENST00000433297 FAM178BQ8IXR5 827 aa12.27□□□□□ -0.45
HMGCS1-202ENST00000433297 SLFN12Q8IYM2 578 aa12.27□□□□□ -0.45
HMGCS1-202ENST00000433297 RFWD2Q8NHY2 731 aa12.27□□□□□ -0.45
HMGCS1-202ENST00000433297 CYP2W1Q8TAV3 490 aa12.27□□□□□ -0.45
HMGCS1-202ENST00000433297 WDR66Q8TBY9 1149 aa12.27□□□□□ -0.45
HMGCS1-202ENST00000433297 TTC1Q99614 292 aa12.27□□□□□ -0.45
HMGCS1-202ENST00000433297 KIAA1586Q9HCI6 787 aa12.27□□□□□ -0.45
HMGCS1-202ENST00000433297 LRRC4BQ9NT99 713 aa12.27□□□□□ -0.45
HMGCS1-202ENST00000433297 ANAPC7Q9UJX3 599 aa12.27□□□□□ -0.45
HMGCS1-202ENST00000433297 ZBED4O75132 1171 aa12.27□□□□□ -0.45
HMGCS1-202ENST00000433297 HAUS5O94927 633 aa12.27□□□□□ -0.45
HMGCS1-202ENST00000433297 PSMG1O95456 288 aa12.27□□□□□ -0.45
HMGCS1-202ENST00000433297 SLURP2P0DP57 97 aa12.27□□□□□ -0.45
HMGCS1-202ENST00000433297 TROVE2P10155 538 aaKnown RBP eCLIP12.27□□□□□ -0.45
HMGCS1-202ENST00000433297 TAL1P17542 331 aaPredicted RBP12.27□□□□□ -0.45
HMGCS1-202ENST00000433297 RPA1P27694 616 aa12.27□□□□□ -0.45
HMGCS1-202ENST00000433297 SMARCA1P28370 1054 aa12.27□□□□□ -0.45
HMGCS1-202ENST00000433297 NEK3P51956 506 aa12.27□□□□□ -0.45
HMGCS1-202ENST00000433297 MCL1Q07820 350 aa12.27□□□□□ -0.45
HMGCS1-202ENST00000433297 SF3B3Q15393 1217 aaKnown RBP12.27□□□□□ -0.45
HMGCS1-202ENST00000433297 ZNF568Q3ZCX4 644 aa12.27□□□□□ -0.45
HMGCS1-202ENST00000433297 EPC2Q52LR7 807 aa12.27□□□□□ -0.45
HMGCS1-202ENST00000433297 PLEKHG4Q58EX7 1191 aa12.27□□□□□ -0.45
HMGCS1-202ENST00000433297 TAB3Q8N5C8 712 aaPredicted RBP12.27□□□□□ -0.45
HMGCS1-202ENST00000433297 BORCS6Q96GS4 357 aa12.27□□□□□ -0.45
HMGCS1-202ENST00000433297 HERPUD2Q9BSE4 406 aa12.27□□□□□ -0.45
HMGCS1-202ENST00000433297 KCNQ5Q9NR82 932 aa12.27□□□□□ -0.45
HMGCS1-202ENST00000433297 FBXO6Q9NRD1 293 aaPredicted RBP12.27□□□□□ -0.45
HMGCS1-202ENST00000433297 TISP43B9A030 160 aa12.26□□□□□ -0.45
HMGCS1-202ENST00000433297 GSC2O15499 205 aa12.26□□□□□ -0.45
HMGCS1-202ENST00000433297 KIF22Q14807 665 aa12.26□□□□□ -0.45
HMGCS1-202ENST00000433297 LRRC36Q1X8D7 754 aa12.26□□□□□ -0.45
HMGCS1-202ENST00000433297 EAPPQ56P03 285 aaPredicted RBP12.26□□□□□ -0.45
HMGCS1-202ENST00000433297 MDH1BQ5I0G3 518 aa12.26□□□□□ -0.45
HMGCS1-202ENST00000433297 ODR4Q5SWX8 454 aa12.26□□□□□ -0.45
HMGCS1-202ENST00000433297 RINT1Q6NUQ1 792 aa12.26□□□□□ -0.45
HMGCS1-202ENST00000433297 NOP9Q86U38 636 aaKnown RBP12.26□□□□□ -0.45
HMGCS1-202ENST00000433297 TRABD2AQ86V40 505 aa12.26□□□□□ -0.45
HMGCS1-202ENST00000433297 ZNF75CPQ92670 426 aaPredicted RBP12.26□□□□□ -0.45
HMGCS1-202ENST00000433297 NDNQ99608 321 aa12.26□□□□□ -0.45
HMGCS1-202ENST00000433297 BTBD10Q9BSF8 475 aa12.26□□□□□ -0.45
HMGCS1-202ENST00000433297 ANKRD2Q9GZV1 360 aa12.26□□□□□ -0.45
HMGCS1-202ENST00000433297 LMCD1Q9NZU5 365 aa12.26□□□□□ -0.45
HMGCS1-202ENST00000433297 SBDSQ9Y3A5 250 aaKnown RBP eCLIP12.26□□□□□ -0.45
HMGCS1-202ENST00000433297 GOLGA8SH3BPF8 625 aa12.26□□□□□ -0.45
HMGCS1-202ENST00000433297 GOLGA8MH3BSY2 632 aa12.26□□□□□ -0.45
HMGCS1-202ENST00000433297 ZBTB5O15062 677 aa12.26□□□□□ -0.45
HMGCS1-202ENST00000433297 GSTA2P09210 222 aa12.26□□□□□ -0.45
HMGCS1-202ENST00000433297 ESRRAP11474 423 aaPredicted RBP12.26□□□□□ -0.45
HMGCS1-202ENST00000433297 KRT4P19013 534 aa12.26□□□□□ -0.45
HMGCS1-202ENST00000433297 IVDP26440 423 aa12.26□□□□□ -0.45
HMGCS1-202ENST00000433297 MAPK4P31152 587 aa12.26□□□□□ -0.45
HMGCS1-202ENST00000433297 CLK2P49760 499 aaKnown RBP12.26□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 17.7 ms