RNA–Protein interactions for RNA: ENST00000431473.3

RIMKLA-202, Transcript of ribosomal modification protein rimK like family member A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RIMKLA, Length 8,909 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RIMKLA-202ENST00000431473 PSMC3IPQ9P2W1 217 aaPredicted RBP12.34□□□□□ -0.43
RIMKLA-202ENST00000431473 ARHGAP31Q2M1Z3 1444 aa12.34□□□□□ -0.43
RIMKLA-202ENST00000431473 PRDX5P30044 214 aa12.34□□□□□ -0.43
RIMKLA-202ENST00000431473 TMED10P49755 219 aaKnown RBP12.34□□□□□ -0.43
RIMKLA-202ENST00000431473 NFX1Q12986 1120 aaKnown RBP12.34□□□□□ -0.43
RIMKLA-202ENST00000431473 CDR2LQ86X02 465 aaPredicted RBP12.34□□□□□ -0.43
RIMKLA-202ENST00000431473 SMG5Q9UPR3 1016 aaKnown RBP12.34□□□□□ -0.43
RIMKLA-202ENST00000431473 TMEM2Q9UHN6 1383 aa12.34□□□□□ -0.43
RIMKLA-202ENST00000431473 SERPINB4P48594 390 aa12.34□□□□□ -0.43
RIMKLA-202ENST00000431473 NR1I3Q14994 352 aa12.34□□□□□ -0.43
RIMKLA-202ENST00000431473 SLC18A3Q16572 532 aa12.34□□□□□ -0.43
RIMKLA-202ENST00000431473 MB21D2Q8IYB1 491 aaPredicted RBP12.34□□□□□ -0.43
RIMKLA-202ENST00000431473 MDM1Q8TC05 714 aa12.34□□□□□ -0.43
RIMKLA-202ENST00000431473 GABBR1Q9UBS5 961 aa12.34□□□□□ -0.43
RIMKLA-202ENST00000431473 CAND2O75155 1236 aa12.34□□□□□ -0.43
RIMKLA-202ENST00000431473 PHKA2P46019 1235 aa12.34□□□□□ -0.43
RIMKLA-202ENST00000431473 SUSD4Q5VX71 490 aa12.34□□□□□ -0.43
RIMKLA-202ENST00000431473 ZNF710Q8N1W2 664 aa12.34□□□□□ -0.43
RIMKLA-202ENST00000431473 GFM2Q969S9 779 aaKnown RBP12.34□□□□□ -0.43
RIMKLA-202ENST00000431473 SLC40A1Q9NP59 571 aa12.34□□□□□ -0.43
RIMKLA-202ENST00000431473 SENP1Q9P0U3 644 aa12.34□□□□□ -0.43
RIMKLA-202ENST00000431473 SEC24CP53992 1094 aa12.34□□□□□ -0.43
RIMKLA-202ENST00000431473 PTK2BQ14289 1009 aa12.34□□□□□ -0.43
RIMKLA-202ENST00000431473 ACCSLQ4AC99 568 aa12.34□□□□□ -0.43
RIMKLA-202ENST00000431473 C16orf89Q6UX73 402 aa12.34□□□□□ -0.43
RIMKLA-202ENST00000431473 C3orf62Q6ZUJ4 267 aa12.34□□□□□ -0.43
RIMKLA-202ENST00000431473 DGKHQ86XP1 1220 aa12.34□□□□□ -0.43
RIMKLA-202ENST00000431473 DTNBP1Q96EV8 351 aa12.34□□□□□ -0.43
RIMKLA-202ENST00000431473 ZNF212Q9UDV6 495 aa12.34□□□□□ -0.43
RIMKLA-202ENST00000431473 MYO3BQ8WXR4 1341 aa12.34□□□□□ -0.43
RIMKLA-202ENST00000431473 ATMINO43313 823 aaPredicted RBP12.34□□□□□ -0.43
RIMKLA-202ENST00000431473 DEAF1O75398 565 aaPredicted RBP12.34□□□□□ -0.43
RIMKLA-202ENST00000431473 KRT72Q14CN4 511 aa12.34□□□□□ -0.43
RIMKLA-202ENST00000431473 FAM182BQ5T319 152 aa12.34□□□□□ -0.43
RIMKLA-202ENST00000431473 ITPRIPL1Q6GPH6 555 aa12.34□□□□□ -0.43
RIMKLA-202ENST00000431473 FAM196AQ6ZSG2 479 aa12.34□□□□□ -0.43
RIMKLA-202ENST00000431473 SYNE4Q8N205 404 aa12.34□□□□□ -0.43
RIMKLA-202ENST00000431473 ZIM3Q96PE6 472 aa12.34□□□□□ -0.43
RIMKLA-202ENST00000431473 GIMAP4Q9NUV9 329 aa12.34□□□□□ -0.43
RIMKLA-202ENST00000431473 CDKL3Q8IVW4 592 aaPredicted RBP12.33□□□□□ -0.43
RIMKLA-202ENST00000431473 MOCS2O96007 188 aaPredicted RBP12.33□□□□□ -0.44
RIMKLA-202ENST00000431473 LTKP29376 864 aa12.33□□□□□ -0.44
RIMKLA-202ENST00000431473 CCDC142Q17RM4 750 aa12.33□□□□□ -0.44
RIMKLA-202ENST00000431473 TRIM72Q6ZMU5 477 aa12.33□□□□□ -0.44
RIMKLA-202ENST00000431473 PRDM5Q9NQX1 630 aaPredicted RBP12.33□□□□□ -0.44
RIMKLA-202ENST00000431473 CDYLQ9Y232 598 aa12.33□□□□□ -0.44
RIMKLA-202ENST00000431473 PRR23D1E9PI22 279 aaPredicted RBP12.33□□□□□ -0.44
RIMKLA-202ENST00000431473 BBOX1O75936 387 aa12.33□□□□□ -0.44
RIMKLA-202ENST00000431473 PRR23D2P0DMB1 279 aaPredicted RBP12.33□□□□□ -0.44
RIMKLA-202ENST00000431473 DSG1Q02413 1049 aa12.33□□□□□ -0.44
RIMKLA-202ENST00000431473 TNFAIP2Q03169 654 aa12.33□□□□□ -0.44
RIMKLA-202ENST00000431473 GJC2Q5T442 439 aaPredicted RBP12.33□□□□□ -0.44
RIMKLA-202ENST00000431473 LVRNQ6Q4G3 990 aa12.33□□□□□ -0.44
RIMKLA-202ENST00000431473 AGGF1Q8N302 714 aaeCLIP12.33□□□□□ -0.44
RIMKLA-202ENST00000431473 ANKARQ7Z5J8 1434 aa12.33□□□□□ -0.44
RIMKLA-202ENST00000431473 MROH7-TTC4A0A0A0MT08 1334 aa12.33□□□□□ -0.44
RIMKLA-202ENST00000431473 WDR19Q8NEZ3 1342 aa12.33□□□□□ -0.44
RIMKLA-202ENST00000431473 ARIH2O95376 493 aa12.33□□□□□ -0.44
RIMKLA-202ENST00000431473 ZC3H7BQ9UGR2 993 aaKnown RBP12.33□□□□□ -0.44
RIMKLA-202ENST00000431473 SRP68Q9UHB9 627 aaKnown RBP12.33□□□□□ -0.44
RIMKLA-202ENST00000431473 CLTCL1P53675 1640 aa12.33□□□□□ -0.44
RIMKLA-202ENST00000431473 CASZ1Q86V15 1759 aa12.33□□□□□ -0.44
RIMKLA-202ENST00000431473 CPDO75976 1380 aa12.33□□□□□ -0.44
RIMKLA-202ENST00000431473 PVALEFA0A1B0GWK0 134 aa12.33□□□□□ -0.44
RIMKLA-202ENST00000431473 PTK7Q13308 1070 aa12.33□□□□□ -0.44
RIMKLA-202ENST00000431473 SMTNL2Q2TAL5 461 aa12.33□□□□□ -0.44
RIMKLA-202ENST00000431473 GPD1LQ8N335 351 aa12.33□□□□□ -0.44
RIMKLA-202ENST00000431473 CCT7Q99832 543 aa12.33□□□□□ -0.44
RIMKLA-202ENST00000431473 TMEM117Q9H0C3 514 aa12.33□□□□□ -0.44
RIMKLA-202ENST00000431473 TMEM161AQ9NX61 479 aa12.33□□□□□ -0.44
RIMKLA-202ENST00000431473 CPA2P48052 419 aa12.33□□□□□ -0.44
RIMKLA-202ENST00000431473 CACNB2Q08289 660 aaPredicted RBP12.33□□□□□ -0.44
RIMKLA-202ENST00000431473 GPR162Q16538 588 aa12.33□□□□□ -0.44
RIMKLA-202ENST00000431473 SUPT20HL1Q3ZLR7 823 aa12.33□□□□□ -0.44
RIMKLA-202ENST00000431473 BEST2Q8NFU1 509 aa12.33□□□□□ -0.44
RIMKLA-202ENST00000431473 RMDN1Q96DB5 314 aa12.33□□□□□ -0.44
RIMKLA-202ENST00000431473 BFARQ9NZS9 450 aa12.33□□□□□ -0.44
RIMKLA-202ENST00000431473 NLRP1Q9C000 1473 aa12.33□□□□□ -0.44
RIMKLA-202ENST00000431473 CCT8L1PA6NM43 557 aa12.33□□□□□ -0.44
RIMKLA-202ENST00000431473 QARSP47897 775 aaKnown RBP12.33□□□□□ -0.44
RIMKLA-202ENST00000431473 ZNF200P98182 395 aaPredicted RBP12.33□□□□□ -0.44
RIMKLA-202ENST00000431473 TSPY1Q01534 308 aa12.33□□□□□ -0.44
RIMKLA-202ENST00000431473 GRM4Q14833 912 aa12.33□□□□□ -0.44
RIMKLA-202ENST00000431473 DNAL1Q4LDG9 190 aa12.33□□□□□ -0.44
RIMKLA-202ENST00000431473 LRIG3Q6UXM1 1119 aa12.33□□□□□ -0.44
RIMKLA-202ENST00000431473 CCNI2Q6ZMN8 369 aaPredicted RBP12.33□□□□□ -0.44
RIMKLA-202ENST00000431473 MRPL4Q9BYD3 311 aaKnown RBP12.33□□□□□ -0.44
RIMKLA-202ENST00000431473 RAB6BQ9NRW1 208 aa12.33□□□□□ -0.44
RIMKLA-202ENST00000431473 MYO1DO94832 1006 aa12.32□□□□□ -0.44
RIMKLA-202ENST00000431473 HSPA1AP0DMV8 641 aaKnown RBP12.32□□□□□ -0.44
RIMKLA-202ENST00000431473 HSPA1BP0DMV9 641 aaKnown RBP12.32□□□□□ -0.44
RIMKLA-202ENST00000431473 RECQLP46063 649 aaPredicted RBP12.32□□□□□ -0.44
RIMKLA-202ENST00000431473 TRIP10Q15642 601 aa12.32□□□□□ -0.44
RIMKLA-202ENST00000431473 GIMAP8Q8ND71 665 aaPredicted RBP12.32□□□□□ -0.44
RIMKLA-202ENST00000431473 CMTM5Q96DZ9 223 aa12.32□□□□□ -0.44
RIMKLA-202ENST00000431473 YWHABP31946 246 aaKnown RBP12.32□□□□□ -0.44
RIMKLA-202ENST00000431473 TAP1Q03518 808 aa12.32□□□□□ -0.44
RIMKLA-202ENST00000431473 STX3Q13277 289 aa12.32□□□□□ -0.44
RIMKLA-202ENST00000431473 RC3H1Q5TC82 1133 aaKnown RBP12.32□□□□□ -0.44
RIMKLA-202ENST00000431473 GUF1Q8N442 669 aaKnown RBP12.32□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 25.5 ms