RNA–Protein interactions for RNA: ENST00000429940.6

LINC00839-202, long intergenic non-protein coding RNA 839, humanhuman

TSL 2 BASIC

Gene LINC00839, Length 2,253 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00839-202ENST00000429940 PRMT6Q96LA8 375 aaPredicted RBP16.03■□□□□ 0.16
LINC00839-202ENST00000429940 PLCD4Q9BRC7 762 aa16.03■□□□□ 0.16
LINC00839-202ENST00000429940 ARHGEF10LQ9HCE6 1279 aa16.03■□□□□ 0.16
LINC00839-202ENST00000429940 ANAPC7Q9UJX3 599 aa16.03■□□□□ 0.16
LINC00839-202ENST00000429940 SCAF8Q9UPN6 1271 aaKnown RBP16.03■□□□□ 0.16
LINC00839-202ENST00000429940 L3MBTL1Q9Y468 752 aa16.03■□□□□ 0.16
LINC00839-202ENST00000429940 A0A1B0GUA9 196 aa16.02■□□□□ 0.16
LINC00839-202ENST00000429940 ALADP13716 330 aa16.02■□□□□ 0.16
LINC00839-202ENST00000429940 ATF2P15336 505 aa16.02■□□□□ 0.16
LINC00839-202ENST00000429940 MAPK4P31152 587 aa16.02■□□□□ 0.16
LINC00839-202ENST00000429940 MPP2Q14168 576 aa16.02■□□□□ 0.16
LINC00839-202ENST00000429940 AGAP11Q8TF27 550 aa16.02■□□□□ 0.16
LINC00839-202ENST00000429940 TGS1Q96RS0 853 aaKnown RBP16.02■□□□□ 0.16
LINC00839-202ENST00000429940 MXRA8Q9BRK3 442 aa16.02■□□□□ 0.16
LINC00839-202ENST00000429940 TDRD3Q9H7E2 651 aaKnown RBP16.02■□□□□ 0.16
LINC00839-202ENST00000429940 SYNPO2Q9UMS6 1093 aa16.02■□□□□ 0.16
LINC00839-202ENST00000429940 ANP32DO95626 131 aa16.02■□□□□ 0.15
LINC00839-202ENST00000429940 GAS8O95995 478 aa16.02■□□□□ 0.15
LINC00839-202ENST00000429940 P4HBP07237 508 aaKnown RBP16.02■□□□□ 0.15
LINC00839-202ENST00000429940 IVDP26440 423 aa16.02■□□□□ 0.15
LINC00839-202ENST00000429940 STX2P32856 288 aa16.02■□□□□ 0.15
LINC00839-202ENST00000429940 MAN1A1P33908 653 aa16.02■□□□□ 0.15
LINC00839-202ENST00000429940 GTF2BQ00403 316 aa16.02■□□□□ 0.15
LINC00839-202ENST00000429940 CAV1Q03135 178 aa16.02■□□□□ 0.15
LINC00839-202ENST00000429940 TBC1D10BQ4KMP7 808 aaPredicted RBP16.02■□□□□ 0.15
LINC00839-202ENST00000429940 SAMD1Q6SPF0 538 aaPredicted RBP16.02■□□□□ 0.15
LINC00839-202ENST00000429940 GRK7Q8WTQ7 553 aa16.02■□□□□ 0.15
LINC00839-202ENST00000429940 NSMCE1Q8WV22 266 aa16.02■□□□□ 0.15
LINC00839-202ENST00000429940 MAIP1Q8WWC4 291 aa16.02■□□□□ 0.15
LINC00839-202ENST00000429940 KIFAP3Q92845 792 aa16.02■□□□□ 0.15
LINC00839-202ENST00000429940 CCDC127Q96BQ5 260 aa16.02■□□□□ 0.15
LINC00839-202ENST00000429940 IFT74Q96LB3 600 aa16.02■□□□□ 0.15
LINC00839-202ENST00000429940 CSRNP1Q96S65 589 aa16.02■□□□□ 0.15
LINC00839-202ENST00000429940 RANBP17Q9H2T7 1088 aaKnown RBP16.02■□□□□ 0.15
LINC00839-202ENST00000429940 RXFP1Q9HBX9 757 aa16.02■□□□□ 0.15
LINC00839-202ENST00000429940 ANAPC5Q9UJX4 755 aa16.02■□□□□ 0.15
LINC00839-202ENST00000429940 CEP83Q9Y592 693 aa16.02■□□□□ 0.15
LINC00839-202ENST00000429940 ZHX2Q9Y6X8 837 aa16.02■□□□□ 0.15
LINC00839-202ENST00000429940 ZNFX1Q9P2E3 1918 aaKnown RBP16.02■□□□□ 0.15
LINC00839-202ENST00000429940 ADCY8P40145 1251 aa16.01■□□□□ 0.15
LINC00839-202ENST00000429940 RARRES1P49788 294 aa16.01■□□□□ 0.15
LINC00839-202ENST00000429940 CRYMQ14894 314 aa16.01■□□□□ 0.15
LINC00839-202ENST00000429940 SNRNP35Q16560 246 aaKnown RBP16.01■□□□□ 0.15
LINC00839-202ENST00000429940 KRT39Q6A163 491 aa16.01■□□□□ 0.15
LINC00839-202ENST00000429940 CBWD2Q8IUF1 395 aa16.01■□□□□ 0.15
LINC00839-202ENST00000429940 KIF2BQ8N4N8 673 aa16.01■□□□□ 0.15
LINC00839-202ENST00000429940 FITM2Q8N6M3 262 aa16.01■□□□□ 0.15
LINC00839-202ENST00000429940 HELQQ8TDG4 1101 aa16.01■□□□□ 0.15
LINC00839-202ENST00000429940 ACER1Q8TDN7 264 aa16.01■□□□□ 0.15
LINC00839-202ENST00000429940 L3MBTL3Q96JM7 780 aaPredicted RBP16.01■□□□□ 0.15
LINC00839-202ENST00000429940 GMLQ99445 158 aa16.01■□□□□ 0.15
LINC00839-202ENST00000429940 SH2D3AQ9BRG2 576 aa16.01■□□□□ 0.15
LINC00839-202ENST00000429940 TRAIPQ9BWF2 469 aa16.01■□□□□ 0.15
LINC00839-202ENST00000429940 NINJ2Q9NZG7 142 aa16.01■□□□□ 0.15
LINC00839-202ENST00000429940 TBK1Q9UHD2 729 aa16.01■□□□□ 0.15
LINC00839-202ENST00000429940 PNMA3Q9UL41 463 aa16.01■□□□□ 0.15
LINC00839-202ENST00000429940 C15orf41Q9Y2V0 281 aa16.01■□□□□ 0.15
LINC00839-202ENST00000429940 ATRNL1Q5VV63 1379 aa16.01■□□□□ 0.15
LINC00839-202ENST00000429940 SLC16A4O15374 487 aa16.01■□□□□ 0.15
LINC00839-202ENST00000429940 TCEA3O75764 348 aa16.01■□□□□ 0.15
LINC00839-202ENST00000429940 KRT16P08779 473 aa16.01■□□□□ 0.15
LINC00839-202ENST00000429940 ITGB5P18084 799 aa16.01■□□□□ 0.15
LINC00839-202ENST00000429940 MKRN3Q13064 507 aaKnown RBP16.01■□□□□ 0.15
LINC00839-202ENST00000429940 ARHGEF18Q6ZSZ5 1173 aa16.01■□□□□ 0.15
LINC00839-202ENST00000429940 CYP4X1Q8N118 509 aa16.01■□□□□ 0.15
LINC00839-202ENST00000429940 DDX1Q92499 740 aaKnown RBP16.01■□□□□ 0.15
LINC00839-202ENST00000429940 DHX38Q92620 1227 aaKnown RBP16.01■□□□□ 0.15
LINC00839-202ENST00000429940 PRCCQ92733 491 aaPredicted RBP16.01■□□□□ 0.15
LINC00839-202ENST00000429940 HERPUD2Q9BSE4 406 aa16.01■□□□□ 0.15
LINC00839-202ENST00000429940 DCLK3Q9C098 648 aa16.01■□□□□ 0.15
LINC00839-202ENST00000429940 PRKAG3Q9UGI9 489 aa16.01■□□□□ 0.15
LINC00839-202ENST00000429940 SERPINA10Q9UK55 444 aa16.01■□□□□ 0.15
LINC00839-202ENST00000429940 ZBTB21Q9ULJ3 1066 aa16.01■□□□□ 0.15
LINC00839-202ENST00000429940 GJA3Q9Y6H8 435 aa16.01■□□□□ 0.15
LINC00839-202ENST00000429940 ADGRA3Q8IWK6 1321 aa16■□□□□ 0.15
LINC00839-202ENST00000429940 EGFRP00533 1210 aa16■□□□□ 0.15
LINC00839-202ENST00000429940 VPS41P49754 854 aa16■□□□□ 0.15
LINC00839-202ENST00000429940 PEX3P56589 373 aa16■□□□□ 0.15
LINC00839-202ENST00000429940 SNRPFP62306 86 aaKnown RBP16■□□□□ 0.15
LINC00839-202ENST00000429940 CLEC16AQ2KHT3 1053 aa16■□□□□ 0.15
LINC00839-202ENST00000429940 SRRM1Q8IYB3 904 aaKnown RBP16■□□□□ 0.15
LINC00839-202ENST00000429940 SAAL1Q96ER3 474 aa16■□□□□ 0.15
LINC00839-202ENST00000429940 THOC1Q96FV9 657 aaKnown RBP16■□□□□ 0.15
LINC00839-202ENST00000429940 MAGEB18Q96M61 343 aa16■□□□□ 0.15
LINC00839-202ENST00000429940 PWWP2AQ96N64 755 aa16■□□□□ 0.15
LINC00839-202ENST00000429940 NT5C1BQ96P26 610 aa16■□□□□ 0.15
LINC00839-202ENST00000429940 XPO5Q9HAV4 1204 aaKnown RBP eCLIP16■□□□□ 0.15
LINC00839-202ENST00000429940 ARHGEF3Q9NR81 526 aa16■□□□□ 0.15
LINC00839-202ENST00000429940 NKIRAS1Q9NYS0 192 aa16■□□□□ 0.15
LINC00839-202ENST00000429940 NOP53Q9NZM5 478 aaKnown RBP16■□□□□ 0.15
LINC00839-202ENST00000429940 STK38LQ9Y2H1 464 aa16■□□□□ 0.15
LINC00839-202ENST00000429940 TMX2Q9Y320 296 aa16■□□□□ 0.15
LINC00839-202ENST00000429940 PSME4Q14997 1843 aa16■□□□□ 0.15
LINC00839-202ENST00000429940 GRIN3BO60391 1043 aa15.99■□□□□ 0.15
LINC00839-202ENST00000429940 SORBS3O60504 671 aa15.99■□□□□ 0.15
LINC00839-202ENST00000429940 ENTPD3O75355 529 aa15.99■□□□□ 0.15
LINC00839-202ENST00000429940 GPC3P51654 580 aa15.99■□□□□ 0.15
LINC00839-202ENST00000429940 ADCY1Q08828 1119 aa15.99■□□□□ 0.15
LINC00839-202ENST00000429940 NAA25Q14CX7 972 aa15.99■□□□□ 0.15
LINC00839-202ENST00000429940 TNIP1Q15025 636 aa15.99■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms