RNA–Protein interactions for RNA: ENST00000429846.1

MSH5-208, Transcript of mutS homolog 5, humanhuman

TSL 3

Gene MSH5, Length 616 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH5-208ENST00000429846 MRPL4Q9BYD3 311 aaKnown RBP16.35■□□□□ 0.21
MSH5-208ENST00000429846 TBC1D17Q9HA65 648 aa16.35■□□□□ 0.21
MSH5-208ENST00000429846 ARHGEF3Q9NR81 526 aa16.35■□□□□ 0.21
MSH5-208ENST00000429846 RBM19Q9Y4C8 960 aaKnown RBP16.35■□□□□ 0.21
MSH5-208ENST00000429846 PCDHB6Q9Y5E3 794 aa16.35■□□□□ 0.21
MSH5-208ENST00000429846 BACE2Q9Y5Z0 518 aa16.35■□□□□ 0.21
MSH5-208ENST00000429846 PDCD11Q14690 1871 aaKnown RBP16.35■□□□□ 0.21
MSH5-208ENST00000429846 PTPRZ1P23471 2315 aaPredicted RBP16.34■□□□□ 0.21
MSH5-208ENST00000429846 SMIM28A0A1B0GU29 152 aa16.34■□□□□ 0.21
MSH5-208ENST00000429846 E9PMD0 336 aa16.34■□□□□ 0.21
MSH5-208ENST00000429846 STK25O00506 426 aa16.34■□□□□ 0.21
MSH5-208ENST00000429846 HIP1RO75146 1068 aa16.34■□□□□ 0.21
MSH5-208ENST00000429846 OR1D2P34982 312 aa16.34■□□□□ 0.21
MSH5-208ENST00000429846 TOB1P50616 345 aaPredicted RBP16.34■□□□□ 0.21
MSH5-208ENST00000429846 PEX3P56589 373 aa16.34■□□□□ 0.21
MSH5-208ENST00000429846 AXDND1Q5T1B0 1012 aaPredicted RBP16.34■□□□□ 0.21
MSH5-208ENST00000429846 KIF2CQ99661 725 aa16.34■□□□□ 0.21
MSH5-208ENST00000429846 CDT1Q9H211 546 aa16.34■□□□□ 0.21
MSH5-208ENST00000429846 PTPRHQ9HD43 1115 aa16.34■□□□□ 0.21
MSH5-208ENST00000429846 KCNG1Q9UIX4 513 aa16.34■□□□□ 0.21
MSH5-208ENST00000429846 CA14Q9ULX7 337 aa16.34■□□□□ 0.21
MSH5-208ENST00000429846 CDY1Q9Y6F8 540 aa16.34■□□□□ 0.21
MSH5-208ENST00000429846 MYO15AQ9UKN7 3530 aa16.33■□□□□ 0.2
MSH5-208ENST00000429846 CCL16O15467 120 aa16.33■□□□□ 0.2
MSH5-208ENST00000429846 ADAM12O43184 909 aa16.33■□□□□ 0.2
MSH5-208ENST00000429846 MCF2P10911 925 aa16.33■□□□□ 0.2
MSH5-208ENST00000429846 RILPL1Q5EBL4 403 aa16.33■□□□□ 0.2
MSH5-208ENST00000429846 ALKAL1Q6UXT8 129 aa16.33■□□□□ 0.2
MSH5-208ENST00000429846 DTHD1Q6ZMT9 781 aa16.33■□□□□ 0.2
MSH5-208ENST00000429846 FRMD5Q7Z6J6 570 aa16.33■□□□□ 0.2
MSH5-208ENST00000429846 DAW1Q8N136 415 aa16.33■□□□□ 0.2
MSH5-208ENST00000429846 CEP120Q8N960 986 aa16.33■□□□□ 0.2
MSH5-208ENST00000429846 FGF13Q92913 245 aa16.33■□□□□ 0.2
MSH5-208ENST00000429846 SHDQ96IW2 340 aa16.33■□□□□ 0.2
MSH5-208ENST00000429846 SNX27Q96L92 541 aa16.33■□□□□ 0.2
MSH5-208ENST00000429846 POLD4Q9HCU8 107 aa16.33■□□□□ 0.2
MSH5-208ENST00000429846 KMT5AQ9NQR1 393 aa16.33■□□□□ 0.2
MSH5-208ENST00000429846 EIF4ENIF1Q9NRA8 985 aaKnown RBP16.33■□□□□ 0.2
MSH5-208ENST00000429846 KCNH3Q9ULD8 1083 aa16.33■□□□□ 0.2
MSH5-208ENST00000429846 POLIQ9UNA4 740 aa16.33■□□□□ 0.2
MSH5-208ENST00000429846 MIA3Q5JRA6 1907 aa16.33■□□□□ 0.2
MSH5-208ENST00000429846 NOTCH4Q99466 2003 aa16.33■□□□□ 0.2
MSH5-208ENST00000429846 PROZP22891 400 aa16.32■□□□□ 0.2
MSH5-208ENST00000429846 GUCY2CP25092 1073 aa16.32■□□□□ 0.2
MSH5-208ENST00000429846 TKTP29401 623 aaKnown RBP16.32■□□□□ 0.2
MSH5-208ENST00000429846 MAPK7Q13164 816 aa16.32■□□□□ 0.2
MSH5-208ENST00000429846 PABPC1LQ4VXU2 614 aaKnown RBP16.32■□□□□ 0.2
MSH5-208ENST00000429846 SLC8B1Q6J4K2 584 aa16.32■□□□□ 0.2
MSH5-208ENST00000429846 RINT1Q6NUQ1 792 aa16.32■□□□□ 0.2
MSH5-208ENST00000429846 PARM1Q6UWI2 310 aa16.32■□□□□ 0.2
MSH5-208ENST00000429846 MPZL3Q6UWV2 235 aa16.32■□□□□ 0.2
MSH5-208ENST00000429846 CD300LGQ6UXG3 332 aa16.32■□□□□ 0.2
MSH5-208ENST00000429846 C1orf186Q6ZWK4 172 aa16.32■□□□□ 0.2
MSH5-208ENST00000429846 C3orf58Q8NDZ4 430 aa16.32■□□□□ 0.2
MSH5-208ENST00000429846 FGF14Q92915 247 aa16.32■□□□□ 0.2
MSH5-208ENST00000429846 RUSC1Q9BVN2 902 aa16.32■□□□□ 0.2
MSH5-208ENST00000429846 SEMA4AQ9H3S1 761 aa16.32■□□□□ 0.2
MSH5-208ENST00000429846 GOLGA2P5Q9HBQ8 144 aa16.32■□□□□ 0.2
MSH5-208ENST00000429846 KCND2Q9NZV8 630 aa16.32■□□□□ 0.2
MSH5-208ENST00000429846 CNTN3Q9P232 1028 aa16.32■□□□□ 0.2
MSH5-208ENST00000429846 PODXLO00592 558 aa16.31■□□□□ 0.2
MSH5-208ENST00000429846 SYN3O14994 580 aa16.31■□□□□ 0.2
MSH5-208ENST00000429846 KCNE1P15382 129 aa16.31■□□□□ 0.2
MSH5-208ENST00000429846 NTHL1P78549 312 aa16.31■□□□□ 0.2
MSH5-208ENST00000429846 SOX4Q06945 474 aaPredicted RBP16.31■□□□□ 0.2
MSH5-208ENST00000429846 HYIQ5T013 277 aa16.31■□□□□ 0.2
MSH5-208ENST00000429846 TAS1R3Q7RTX0 852 aa16.31■□□□□ 0.2
MSH5-208ENST00000429846 ZNF461Q8TAF7 563 aa16.31■□□□□ 0.2
MSH5-208ENST00000429846 ACAP3Q96P50 834 aa16.31■□□□□ 0.2
MSH5-208ENST00000429846 NTPCRQ9BSD7 190 aaKnown RBP16.31■□□□□ 0.2
MSH5-208ENST00000429846 TCHPQ9BT92 498 aa16.31■□□□□ 0.2
MSH5-208ENST00000429846 MMTAG2Q9BU76 263 aaKnown RBP16.31■□□□□ 0.2
MSH5-208ENST00000429846 TARS2Q9BW92 718 aaKnown RBP16.31■□□□□ 0.2
MSH5-208ENST00000429846 AVENQ9NQS1 362 aaPredicted RBP16.31■□□□□ 0.2
MSH5-208ENST00000429846 SIT1Q9Y3P8 196 aa16.31■□□□□ 0.2
MSH5-208ENST00000429846 FANCMQ8IYD8 2048 aa16.3■□□□□ 0.2
MSH5-208ENST00000429846 PP2D1A8MPX8 630 aa16.3■□□□□ 0.2
MSH5-208ENST00000429846 ABLIM1O14639 778 aa16.3■□□□□ 0.2
MSH5-208ENST00000429846 TOM1L1O75674 476 aa16.3■□□□□ 0.2
MSH5-208ENST00000429846 RPL9P32969 192 aaKnown RBP16.3■□□□□ 0.2
MSH5-208ENST00000429846 BRCC3P46736 316 aa16.3■□□□□ 0.2
MSH5-208ENST00000429846 SMTNP53814 917 aa16.3■□□□□ 0.2
MSH5-208ENST00000429846 STARD6P59095 220 aa16.3■□□□□ 0.2
MSH5-208ENST00000429846 OSTNP61366 133 aa16.3■□□□□ 0.2
MSH5-208ENST00000429846 ATP2C1P98194 919 aaPredicted RBP16.3■□□□□ 0.2
MSH5-208ENST00000429846 PFKPQ01813 784 aa16.3■□□□□ 0.2
MSH5-208ENST00000429846 STRN3Q13033 797 aa16.3■□□□□ 0.2
MSH5-208ENST00000429846 NOLC1Q14978 699 aaKnown RBP eCLIP16.3■□□□□ 0.2
MSH5-208ENST00000429846 RABEP1Q15276 862 aa16.3■□□□□ 0.2
MSH5-208ENST00000429846 RSPO2Q6UXX9 243 aaPredicted RBP16.3■□□□□ 0.2
MSH5-208ENST00000429846 NPAS3Q8IXF0 933 aa16.3■□□□□ 0.2
MSH5-208ENST00000429846 PJA1Q8NG27 643 aa16.3■□□□□ 0.2
MSH5-208ENST00000429846 ITFG1Q8TB96 612 aa16.3■□□□□ 0.2
MSH5-208ENST00000429846 SPIRE2Q8WWL2 714 aa16.3■□□□□ 0.2
MSH5-208ENST00000429846 DLGAP2Q9P1A6 1054 aa16.3■□□□□ 0.2
MSH5-208ENST00000429846 DNMT3BQ9UBC3 853 aaKnown RBP16.3■□□□□ 0.2
MSH5-208ENST00000429846 NUB1Q9Y5A7 615 aa16.3■□□□□ 0.2
MSH5-208ENST00000429846 GTF3C5Q9Y5Q8 519 aaPredicted RBP16.3■□□□□ 0.2
MSH5-208ENST00000429846 GVINP1Q7Z2Y8 2422 aa16.29■□□□□ 0.2
MSH5-208ENST00000429846 ARHGEF37A1IGU5 675 aa16.29■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 39.1 ms