RNA–Protein interactions for RNA: ENST00000429440.5

CDC42BPA-206, Transcript of CDC42 binding protein kinase alpha, humanhuman

TSL 2

Gene CDC42BPA, Length 2,501 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPA-206ENST00000429440 GOLGA8CPA6NN73 597 aa9.4□□□□□ -0.91
CDC42BPA-206ENST00000429440 COBLO75128 1261 aa9.4□□□□□ -0.91
CDC42BPA-206ENST00000429440 FARP2O94887 1054 aaPredicted RBP9.4□□□□□ -0.91
CDC42BPA-206ENST00000429440 PGM3O95394 542 aa9.4□□□□□ -0.91
CDC42BPA-206ENST00000429440 VCLP18206 1134 aa9.4□□□□□ -0.91
CDC42BPA-206ENST00000429440 CASP1P29466 404 aa9.4□□□□□ -0.91
CDC42BPA-206ENST00000429440 VCPP55072 806 aaKnown RBP9.4□□□□□ -0.91
CDC42BPA-206ENST00000429440 PDK3Q15120 406 aa9.4□□□□□ -0.91
CDC42BPA-206ENST00000429440 ANKRD20A4Q4UJ75 823 aa9.4□□□□□ -0.91
CDC42BPA-206ENST00000429440 SLC27A3Q5K4L6 730 aa9.4□□□□□ -0.91
CDC42BPA-206ENST00000429440 RWDD4Q6NW29 188 aaKnown RBP9.4□□□□□ -0.91
CDC42BPA-206ENST00000429440 ZNF410Q86VK4 478 aa9.4□□□□□ -0.91
CDC42BPA-206ENST00000429440 RASSF3Q86WH2 238 aa9.4□□□□□ -0.91
CDC42BPA-206ENST00000429440 GABPB2Q8TAK5 448 aaPredicted RBP9.4□□□□□ -0.91
CDC42BPA-206ENST00000429440 MCUR1Q96AQ8 359 aa9.4□□□□□ -0.91
CDC42BPA-206ENST00000429440 OTUD5Q96G74 571 aa9.4□□□□□ -0.91
CDC42BPA-206ENST00000429440 PCMTD1Q96MG8 357 aaPredicted RBP9.4□□□□□ -0.91
CDC42BPA-206ENST00000429440 BTBD9Q96Q07 612 aa9.4□□□□□ -0.91
CDC42BPA-206ENST00000429440 HAUS7Q99871 368 aa9.4□□□□□ -0.91
CDC42BPA-206ENST00000429440 GPAMQ9HCL2 828 aa9.4□□□□□ -0.91
CDC42BPA-206ENST00000429440 ITGB4P16144 1822 aa9.39□□□□□ -0.91
CDC42BPA-206ENST00000429440 C2CD2LO14523 706 aa9.39□□□□□ -0.91
CDC42BPA-206ENST00000429440 ADCY6O43306 1168 aa9.39□□□□□ -0.91
CDC42BPA-206ENST00000429440 BUD23O43709 281 aaKnown RBP9.39□□□□□ -0.91
CDC42BPA-206ENST00000429440 EXOC3O60645 756 aa9.39□□□□□ -0.91
CDC42BPA-206ENST00000429440 LDHCP07864 332 aa9.39□□□□□ -0.91
CDC42BPA-206ENST00000429440 CHRNB1P11230 501 aa9.39□□□□□ -0.91
CDC42BPA-206ENST00000429440 RARGP13631 454 aa9.39□□□□□ -0.91
CDC42BPA-206ENST00000429440 IL2RBP14784 551 aa9.39□□□□□ -0.91
CDC42BPA-206ENST00000429440 HOXD13P35453 343 aa9.39□□□□□ -0.91
CDC42BPA-206ENST00000429440 SLC1A4P43007 532 aa9.39□□□□□ -0.91
CDC42BPA-206ENST00000429440 PCYT1AP49585 367 aa9.39□□□□□ -0.91
CDC42BPA-206ENST00000429440 NUP107P57740 925 aa9.39□□□□□ -0.91
CDC42BPA-206ENST00000429440 ARHGAP4P98171 946 aa9.39□□□□□ -0.91
CDC42BPA-206ENST00000429440 THOC5Q13769 683 aaKnown RBP9.39□□□□□ -0.91
CDC42BPA-206ENST00000429440 KCTD21Q4G0X4 260 aa9.39□□□□□ -0.91
CDC42BPA-206ENST00000429440 MAMSTRQ6ZN01 415 aa9.39□□□□□ -0.91
CDC42BPA-206ENST00000429440 FASTKD5Q7L8L6 764 aaKnown RBP9.39□□□□□ -0.91
CDC42BPA-206ENST00000429440 VPS52Q8N1B4 723 aa9.39□□□□□ -0.91
CDC42BPA-206ENST00000429440 EPS8L3Q8TE67 593 aaKnown RBP9.39□□□□□ -0.91
CDC42BPA-206ENST00000429440 GIPC2Q8TF65 315 aa9.39□□□□□ -0.91
CDC42BPA-206ENST00000429440 CHPT1Q8WUD6 406 aa9.39□□□□□ -0.91
CDC42BPA-206ENST00000429440 SCFD1Q8WVM8 642 aa9.39□□□□□ -0.91
CDC42BPA-206ENST00000429440 ERP44Q9BS26 406 aa9.39□□□□□ -0.91
CDC42BPA-206ENST00000429440 RRN3Q9NYV6 651 aa9.39□□□□□ -0.91
CDC42BPA-206ENST00000429440 ZFP69BQ9UJL9 534 aa9.39□□□□□ -0.91
CDC42BPA-206ENST00000429440 DBR1Q9UK59 544 aaKnown RBP9.39□□□□□ -0.91
CDC42BPA-206ENST00000429440 NOC2LQ9Y3T9 749 aaKnown RBP9.39□□□□□ -0.91
CDC42BPA-206ENST00000429440 RPTORQ8N122 1335 aa9.39□□□□□ -0.91
CDC42BPA-206ENST00000429440 FAM187AA6NFU0 413 aa9.39□□□□□ -0.91
CDC42BPA-206ENST00000429440 GYG2O15488 501 aa9.39□□□□□ -0.91
CDC42BPA-206ENST00000429440 LDHBP07195 334 aaKnown RBP9.39□□□□□ -0.91
CDC42BPA-206ENST00000429440 ZBTB48P10074 688 aaPredicted RBP9.39□□□□□ -0.91
CDC42BPA-206ENST00000429440 HSPD1P10809 573 aaKnown RBP9.39□□□□□ -0.91
CDC42BPA-206ENST00000429440 CDH2P19022 906 aaPredicted RBP9.39□□□□□ -0.91
CDC42BPA-206ENST00000429440 DNA2P51530 1060 aa9.39□□□□□ -0.91
CDC42BPA-206ENST00000429440 IL9RQ01113 521 aa9.39□□□□□ -0.91
CDC42BPA-206ENST00000429440 C16orf72Q14CZ0 275 aa9.39□□□□□ -0.91
CDC42BPA-206ENST00000429440 TAF1BQ53T94 588 aaPredicted RBP9.39□□□□□ -0.91
CDC42BPA-206ENST00000429440 TMCO4Q5TGY1 634 aa9.39□□□□□ -0.91
CDC42BPA-206ENST00000429440 POTEHQ6S545 545 aa9.39□□□□□ -0.91
CDC42BPA-206ENST00000429440 BARGINQ6ZT62 677 aa9.39□□□□□ -0.91
CDC42BPA-206ENST00000429440 MB21D2Q8IYB1 491 aaPredicted RBP9.39□□□□□ -0.91
CDC42BPA-206ENST00000429440 BORCS5Q969J3 196 aa9.39□□□□□ -0.91
CDC42BPA-206ENST00000429440 EGLN2Q96KS0 407 aa9.39□□□□□ -0.91
CDC42BPA-206ENST00000429440 TRIM55Q9BYV6 548 aa9.39□□□□□ -0.91
CDC42BPA-206ENST00000429440 ZBTB3Q9H5J0 574 aa9.39□□□□□ -0.91
CDC42BPA-206ENST00000429440 DISP2A7MBM2 1401 aa9.38□□□□□ -0.91
CDC42BPA-206ENST00000429440 XDHP47989 1333 aa9.38□□□□□ -0.91
CDC42BPA-206ENST00000429440 SLC26A4O43511 780 aa9.38□□□□□ -0.91
CDC42BPA-206ENST00000429440 MAGEC1O60732 1142 aa9.38□□□□□ -0.91
CDC42BPA-206ENST00000429440 FKBP6O75344 327 aa9.38□□□□□ -0.91
CDC42BPA-206ENST00000429440 FUCA1P04066 466 aa9.38□□□□□ -0.91
CDC42BPA-206ENST00000429440 MZF1P28698 734 aaPredicted RBP9.38□□□□□ -0.91
CDC42BPA-206ENST00000429440 UBA7P41226 1012 aa9.38□□□□□ -0.91
CDC42BPA-206ENST00000429440 KLK7P49862 253 aa9.38□□□□□ -0.91
CDC42BPA-206ENST00000429440 TRMT5Q32P41 509 aaKnown RBP9.38□□□□□ -0.91
CDC42BPA-206ENST00000429440 USP41Q3LFD5 358 aa9.38□□□□□ -0.91
CDC42BPA-206ENST00000429440 HERC4Q5GLZ8 1057 aaPredicted RBP9.38□□□□□ -0.91
CDC42BPA-206ENST00000429440 AAGABQ6PD74 315 aa9.38□□□□□ -0.91
CDC42BPA-206ENST00000429440 CLNKQ7Z7G1 428 aa9.38□□□□□ -0.91
CDC42BPA-206ENST00000429440 CRACR2BQ8N4Y2 399 aaPredicted RBP9.38□□□□□ -0.91
CDC42BPA-206ENST00000429440 METTL25Q8N6Q8 603 aa9.38□□□□□ -0.91
CDC42BPA-206ENST00000429440 KBTBD3Q8NAB2 608 aa9.38□□□□□ -0.91
CDC42BPA-206ENST00000429440 C10orf82Q8WW14 230 aa9.38□□□□□ -0.91
CDC42BPA-206ENST00000429440 WASF1Q92558 559 aa9.38□□□□□ -0.91
CDC42BPA-206ENST00000429440 PTCD3Q96EY7 689 aaKnown RBP9.38□□□□□ -0.91
CDC42BPA-206ENST00000429440 EPSTI1Q96J88 318 aa9.38□□□□□ -0.91
CDC42BPA-206ENST00000429440 AP1M1Q9BXS5 423 aa9.38□□□□□ -0.91
CDC42BPA-206ENST00000429440 PALMDQ9NP74 551 aa9.38□□□□□ -0.91
CDC42BPA-206ENST00000429440 NKIRAS1Q9NYS0 192 aa9.38□□□□□ -0.91
CDC42BPA-206ENST00000429440 STK17AQ9UEE5 414 aa9.38□□□□□ -0.91
CDC42BPA-206ENST00000429440 PARP2Q9UGN5 583 aa9.38□□□□□ -0.91
CDC42BPA-206ENST00000429440 PALLDQ8WX93 1383 aa9.38□□□□□ -0.91
CDC42BPA-206ENST00000429440 A0A1W2PQ67 120 aa9.38□□□□□ -0.91
CDC42BPA-206ENST00000429440 UNCXA6NJT0 531 aa9.38□□□□□ -0.91
CDC42BPA-206ENST00000429440 TTLL13PA6NNM8 815 aa9.38□□□□□ -0.91
CDC42BPA-206ENST00000429440 PLSCR1O15162 318 aa9.38□□□□□ -0.91
CDC42BPA-206ENST00000429440 ALOX15BO15296 676 aa9.38□□□□□ -0.91
CDC42BPA-206ENST00000429440 RIPK2O43353 540 aa9.38□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 22 ms