RNA–Protein interactions for RNA: ENST00000429411.5

HPS4-205, Transcript of HPS4, biogenesis of lysosomal organelles complex 3 subunit 2, humanhuman

TSL 2

Gene HPS4, Length 3,492 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS4-205ENST00000429411 KRT39Q6A163 491 aa8.59□□□□□ -1.03
HPS4-205ENST00000429411 TRIM68Q6AZZ1 485 aa8.59□□□□□ -1.03
HPS4-205ENST00000429411 SWSAP1Q6NVH7 229 aa8.59□□□□□ -1.03
HPS4-205ENST00000429411 CYB5D1Q6P9G0 228 aa8.59□□□□□ -1.03
HPS4-205ENST00000429411 ZBTB33Q86T24 672 aa8.59□□□□□ -1.03
HPS4-205ENST00000429411 TTC30AQ86WT1 665 aa8.59□□□□□ -1.03
HPS4-205ENST00000429411 SIAH1Q8IUQ4 282 aa8.59□□□□□ -1.03
HPS4-205ENST00000429411 PRELID2Q8N945 189 aa8.59□□□□□ -1.03
HPS4-205ENST00000429411 SEL1LQ9UBV2 794 aa8.59□□□□□ -1.03
HPS4-205ENST00000429411 CCDC88AQ3V6T2 1871 aa8.59□□□□□ -1.03
HPS4-205ENST00000429411 UBR3Q6ZT12 1888 aa8.59□□□□□ -1.03
HPS4-205ENST00000429411 FAM187AA6NFU0 413 aa8.59□□□□□ -1.04
HPS4-205ENST00000429411 EIF3DO15371 548 aaKnown RBP eCLIP8.59□□□□□ -1.04
HPS4-205ENST00000429411 CREB1P16220 341 aa8.59□□□□□ -1.04
HPS4-205ENST00000429411 TNFRSF8P28908 595 aa8.59□□□□□ -1.04
HPS4-205ENST00000429411 CNGA1P29973 690 aa8.59□□□□□ -1.04
HPS4-205ENST00000429411 COILP38432 576 aaPredicted RBP8.59□□□□□ -1.04
HPS4-205ENST00000429411 SCTRP47872 440 aa8.59□□□□□ -1.04
HPS4-205ENST00000429411 HIRAP54198 1017 aaPredicted RBP8.59□□□□□ -1.04
HPS4-205ENST00000429411 MYO1EQ12965 1108 aa8.59□□□□□ -1.04
HPS4-205ENST00000429411 DHX34Q14147 1143 aaKnown RBP8.59□□□□□ -1.04
HPS4-205ENST00000429411 PUS10Q3MIT2 529 aaKnown RBP8.59□□□□□ -1.04
HPS4-205ENST00000429411 BRDTQ58F21 947 aaPredicted RBP8.59□□□□□ -1.04
HPS4-205ENST00000429411 SLC13A5Q86YT5 568 aaPredicted RBP8.59□□□□□ -1.04
HPS4-205ENST00000429411 TAAR1Q96RJ0 339 aa8.59□□□□□ -1.04
HPS4-205ENST00000429411 PPP1R16BQ96T49 567 aa8.59□□□□□ -1.04
HPS4-205ENST00000429411 ALG13Q9NP73 1137 aaKnown RBP8.59□□□□□ -1.04
HPS4-205ENST00000429411 SAYSD1Q9NPB0 183 aa8.59□□□□□ -1.04
HPS4-205ENST00000429411 CHST7Q9NS84 486 aa8.59□□□□□ -1.04
HPS4-205ENST00000429411 DONSONQ9NYP3 566 aa8.59□□□□□ -1.04
HPS4-205ENST00000429411 IRS2Q9Y4H2 1338 aa8.58□□□□□ -1.04
HPS4-205ENST00000429411 CYP3A7-CYP3A51PA0A087WV96 503 aa8.58□□□□□ -1.04
HPS4-205ENST00000429411 WNT10BO00744 389 aa8.58□□□□□ -1.04
HPS4-205ENST00000429411 PSMD10O75832 226 aa8.58□□□□□ -1.04
HPS4-205ENST00000429411 KRT10P13645 584 aa8.58□□□□□ -1.04
HPS4-205ENST00000429411 ITGB5P18084 799 aa8.58□□□□□ -1.04
HPS4-205ENST00000429411 RRM1P23921 792 aa8.58□□□□□ -1.04
HPS4-205ENST00000429411 CYP3A7P24462 503 aa8.58□□□□□ -1.04
HPS4-205ENST00000429411 ZNF157P51786 506 aaPredicted RBP8.58□□□□□ -1.04
HPS4-205ENST00000429411 POLGP54098 1239 aaPredicted RBP8.58□□□□□ -1.04
HPS4-205ENST00000429411 SESN3P58005 492 aa8.58□□□□□ -1.04
HPS4-205ENST00000429411 ZBTB16Q05516 673 aa8.58□□□□□ -1.04
HPS4-205ENST00000429411 PPATQ06203 517 aa8.58□□□□□ -1.04
HPS4-205ENST00000429411 SLMAPQ14BN4 828 aa8.58□□□□□ -1.04
HPS4-205ENST00000429411 PPP2R5AQ15172 486 aa8.58□□□□□ -1.04
HPS4-205ENST00000429411 DACT2Q5SW24 774 aa8.58□□□□□ -1.04
HPS4-205ENST00000429411 LIN9Q5TKA1 542 aa8.58□□□□□ -1.04
HPS4-205ENST00000429411 AGBL2Q5U5Z8 902 aa8.58□□□□□ -1.04
HPS4-205ENST00000429411 C15orf52Q6ZUT6 534 aaKnown RBP8.58□□□□□ -1.04
HPS4-205ENST00000429411 ZNF572Q7Z3I7 529 aaPredicted RBP8.58□□□□□ -1.04
HPS4-205ENST00000429411 MREGQ8N565 214 aa8.58□□□□□ -1.04
HPS4-205ENST00000429411 FBXL13Q8NEE6 735 aa8.58□□□□□ -1.04
HPS4-205ENST00000429411 SLC5A5Q92911 643 aa8.58□□□□□ -1.04
HPS4-205ENST00000429411 PCDHB18PQ96TA0 734 aa8.58□□□□□ -1.04
HPS4-205ENST00000429411 MXRA8Q9BRK3 442 aa8.58□□□□□ -1.04
HPS4-205ENST00000429411 CDC42EP4Q9H3Q1 356 aaKnown RBP8.58□□□□□ -1.04
HPS4-205ENST00000429411 VCPKMTQ9H867 229 aa8.58□□□□□ -1.04
HPS4-205ENST00000429411 ACTR5Q9H9F9 607 aaPredicted RBP8.58□□□□□ -1.04
HPS4-205ENST00000429411 DDX60Q8IY21 1712 aaKnown RBP8.58□□□□□ -1.04
HPS4-205ENST00000429411 EXOC1LA0A1B0GW35 172 aa8.58□□□□□ -1.04
HPS4-205ENST00000429411 RASA4BC9J798 803 aa8.58□□□□□ -1.04
HPS4-205ENST00000429411 H0Y3Z8 333 aa8.58□□□□□ -1.04
HPS4-205ENST00000429411 GOLGA8RI6L899 631 aa8.58□□□□□ -1.04
HPS4-205ENST00000429411 FZD9O00144 591 aa8.58□□□□□ -1.04
HPS4-205ENST00000429411 DNM1LO00429 736 aa8.58□□□□□ -1.04
HPS4-205ENST00000429411 KIAA0391O15091 583 aaKnown RBP8.58□□□□□ -1.04
HPS4-205ENST00000429411 RASA4O43374 803 aa8.58□□□□□ -1.04
HPS4-205ENST00000429411 SUN1O94901 812 aa8.58□□□□□ -1.04
HPS4-205ENST00000429411 CDC25CP30307 473 aa8.58□□□□□ -1.04
HPS4-205ENST00000429411 ZNF131P52739 623 aa8.58□□□□□ -1.04
HPS4-205ENST00000429411 ITGA8P53708 1063 aa8.58□□□□□ -1.04
HPS4-205ENST00000429411 SMAD1Q15797 465 aaKnown RBP8.58□□□□□ -1.04
HPS4-205ENST00000429411 SPRED3Q2MJR0 410 aa8.58□□□□□ -1.04
HPS4-205ENST00000429411 TTC27Q6P3X3 843 aa8.58□□□□□ -1.04
HPS4-205ENST00000429411 C4orf33Q8N1A6 199 aa8.58□□□□□ -1.04
HPS4-205ENST00000429411 TMEM143Q96AN5 459 aa8.58□□□□□ -1.04
HPS4-205ENST00000429411 MKNK1Q9BUB5 465 aa8.58□□□□□ -1.04
HPS4-205ENST00000429411 OSBPL7Q9BZF2 842 aa8.58□□□□□ -1.04
HPS4-205ENST00000429411 DEFB129Q9H1M3 183 aa8.58□□□□□ -1.04
HPS4-205ENST00000429411 SUDS3Q9H7L9 328 aaPredicted RBP8.58□□□□□ -1.04
HPS4-205ENST00000429411 ADAM22Q9P0K1 906 aa8.58□□□□□ -1.04
HPS4-205ENST00000429411 KLHL14Q9P2G3 628 aa8.58□□□□□ -1.04
HPS4-205ENST00000429411 SLX4Q8IY92 1834 aa8.58□□□□□ -1.04
HPS4-205ENST00000429411 LRRD1A4D1F6 860 aa8.57□□□□□ -1.04
HPS4-205ENST00000429411 SGK1O00141 431 aa8.57□□□□□ -1.04
HPS4-205ENST00000429411 DDX3YO15523 660 aaKnown RBP8.57□□□□□ -1.04
HPS4-205ENST00000429411 ADRB2P07550 413 aa8.57□□□□□ -1.04
HPS4-205ENST00000429411 RALAP11233 206 aa8.57□□□□□ -1.04
HPS4-205ENST00000429411 CYP11B1P15538 503 aa8.57□□□□□ -1.04
HPS4-205ENST00000429411 HOXA7P31268 230 aaPredicted RBP8.57□□□□□ -1.04
HPS4-205ENST00000429411 RARRES1P49788 294 aa8.57□□□□□ -1.04
HPS4-205ENST00000429411 RPS6P62753 249 aaKnown RBP8.57□□□□□ -1.04
HPS4-205ENST00000429411 SPP2Q13103 211 aa8.57□□□□□ -1.04
HPS4-205ENST00000429411 KCNV1Q6PIU1 500 aa8.57□□□□□ -1.04
HPS4-205ENST00000429411 MOXD1Q6UVY6 613 aa8.57□□□□□ -1.04
HPS4-205ENST00000429411 EPM2AIP1Q7L775 607 aaPredicted RBP8.57□□□□□ -1.04
HPS4-205ENST00000429411 DEPTORQ8TB45 409 aa8.57□□□□□ -1.04
HPS4-205ENST00000429411 GMCL1Q96IK5 515 aa8.57□□□□□ -1.04
HPS4-205ENST00000429411 RUNDC3BQ96NL0 473 aa8.57□□□□□ -1.04
HPS4-205ENST00000429411 RMI1Q9H9A7 625 aa8.57□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 19.6 ms