RNA–Protein interactions for RNA: ENST00000428868.1

SMC6-204, Transcript of structural maintenance of chromosomes 6, humanhuman

TSL 4

Gene SMC6, Length 544 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC6-204ENST00000428868 APOBEC3GQ9HC16 384 aaKnown RBP9.61□□□□□ -0.87
SMC6-204ENST00000428868 PLCB1Q9NQ66 1216 aa9.61□□□□□ -0.87
SMC6-204ENST00000428868 CEP72Q9P209 647 aa9.61□□□□□ -0.87
SMC6-204ENST00000428868 PADI3Q9ULW8 664 aa9.61□□□□□ -0.87
SMC6-204ENST00000428868 COQ4Q9Y3A0 265 aa9.61□□□□□ -0.87
SMC6-204ENST00000428868 GBF1Q92538 1859 aa9.61□□□□□ -0.87
SMC6-204ENST00000428868 A0A0U1RQJ8 604 aa9.6□□□□□ -0.87
SMC6-204ENST00000428868 USP27XA6NNY8 438 aa9.6□□□□□ -0.87
SMC6-204ENST00000428868 PMM2O15305 246 aa9.6□□□□□ -0.87
SMC6-204ENST00000428868 PQBP1O60828 265 aaKnown RBP9.6□□□□□ -0.87
SMC6-204ENST00000428868 N4BP1O75113 896 aaKnown RBP9.6□□□□□ -0.87
SMC6-204ENST00000428868 RECQL4O94761 1208 aa9.6□□□□□ -0.87
SMC6-204ENST00000428868 CLTAP09496 248 aa9.6□□□□□ -0.87
SMC6-204ENST00000428868 COL6A1P12109 1028 aa9.6□□□□□ -0.87
SMC6-204ENST00000428868 SKILP12757 684 aa9.6□□□□□ -0.87
SMC6-204ENST00000428868 UCHL3P15374 230 aa9.6□□□□□ -0.87
SMC6-204ENST00000428868 AXLP30530 894 aa9.6□□□□□ -0.87
SMC6-204ENST00000428868 ZBED6P86452 979 aa9.6□□□□□ -0.87
SMC6-204ENST00000428868 ENPEPQ07075 957 aa9.6□□□□□ -0.87
SMC6-204ENST00000428868 NFX1Q12986 1120 aaKnown RBP9.6□□□□□ -0.87
SMC6-204ENST00000428868 DSC3Q14574 896 aa9.6□□□□□ -0.87
SMC6-204ENST00000428868 TRIM60Q495X7 471 aa9.6□□□□□ -0.87
SMC6-204ENST00000428868 SLC39A5Q6ZMH5 540 aa9.6□□□□□ -0.87
SMC6-204ENST00000428868 WDR49Q8IV35 697 aa9.6□□□□□ -0.87
SMC6-204ENST00000428868 CNGA4Q8IV77 575 aa9.6□□□□□ -0.87
SMC6-204ENST00000428868 ATRIPQ8WXE1 791 aa9.6□□□□□ -0.87
SMC6-204ENST00000428868 LPPQ93052 612 aa9.6□□□□□ -0.87
SMC6-204ENST00000428868 SNX27Q96L92 541 aa9.6□□□□□ -0.87
SMC6-204ENST00000428868 KREMEN1Q96MU8 473 aa9.6□□□□□ -0.87
SMC6-204ENST00000428868 PANX2Q96RD6 677 aa9.6□□□□□ -0.87
SMC6-204ENST00000428868 BAG1Q99933 345 aaPredicted RBP9.6□□□□□ -0.87
SMC6-204ENST00000428868 ADPGKQ9BRR6 497 aa9.6□□□□□ -0.87
SMC6-204ENST00000428868 NUP58Q9BVL2 599 aa9.6□□□□□ -0.87
SMC6-204ENST00000428868 KLK14Q9P0G3 267 aa9.6□□□□□ -0.87
SMC6-204ENST00000428868 DNAJC12Q9UKB3 198 aa9.6□□□□□ -0.87
SMC6-204ENST00000428868 LUC7L2Q9Y383 392 aaKnown RBP9.6□□□□□ -0.87
SMC6-204ENST00000428868 IPPQ9Y573 584 aa9.6□□□□□ -0.87
SMC6-204ENST00000428868 COL4A6Q14031 1691 aa9.6□□□□□ -0.87
SMC6-204ENST00000428868 PTPRDP23468 1912 aa9.6□□□□□ -0.87
SMC6-204ENST00000428868 NLRC5Q86WI3 1866 aa9.59□□□□□ -0.87
SMC6-204ENST00000428868 PPEF2O14830 753 aa9.59□□□□□ -0.87
SMC6-204ENST00000428868 P4HA2O15460 535 aa9.59□□□□□ -0.87
SMC6-204ENST00000428868 CST3P01034 146 aaPredicted RBP9.59□□□□□ -0.87
SMC6-204ENST00000428868 CALCAP01258 141 aa9.59□□□□□ -0.87
SMC6-204ENST00000428868 IBSPP21815 317 aaPredicted RBP9.59□□□□□ -0.87
SMC6-204ENST00000428868 GTF2H1P32780 548 aa9.59□□□□□ -0.87
SMC6-204ENST00000428868 PIK3CAP42336 1068 aa9.59□□□□□ -0.87
SMC6-204ENST00000428868 GJA8P48165 433 aa9.59□□□□□ -0.87
SMC6-204ENST00000428868 TFAMQ00059 246 aaKnown RBP9.59□□□□□ -0.87
SMC6-204ENST00000428868 BIRC3Q13489 604 aa9.59□□□□□ -0.87
SMC6-204ENST00000428868 RAPGEF1Q13905 1077 aa9.59□□□□□ -0.87
SMC6-204ENST00000428868 ARHGAP44Q17R89 818 aa9.59□□□□□ -0.87
SMC6-204ENST00000428868 GLRA4Q5JXX5 417 aa9.59□□□□□ -0.87
SMC6-204ENST00000428868 HGSNATQ68CP4 663 aa9.59□□□□□ -0.87
SMC6-204ENST00000428868 TWF2Q6IBS0 349 aaKnown RBP9.59□□□□□ -0.87
SMC6-204ENST00000428868 TOGARAM2Q6ZUX3 1019 aa9.59□□□□□ -0.87
SMC6-204ENST00000428868 TRAPPC11Q7Z392 1133 aa9.59□□□□□ -0.87
SMC6-204ENST00000428868 CACNA2D4Q7Z3S7 1137 aa9.59□□□□□ -0.87
SMC6-204ENST00000428868 ZSCAN30Q86W11 494 aa9.59□□□□□ -0.87
SMC6-204ENST00000428868 FBXL13Q8NEE6 735 aa9.59□□□□□ -0.87
SMC6-204ENST00000428868 OLIG1Q8TAK6 271 aa9.59□□□□□ -0.87
SMC6-204ENST00000428868 CXorf38Q8TB03 319 aa9.59□□□□□ -0.87
SMC6-204ENST00000428868 HELQQ8TDG4 1101 aa9.59□□□□□ -0.87
SMC6-204ENST00000428868 C18orf25Q96B23 403 aaPredicted RBP9.59□□□□□ -0.87
SMC6-204ENST00000428868 ACAP3Q96P50 834 aa9.59□□□□□ -0.87
SMC6-204ENST00000428868 ARID3AQ99856 593 aa9.59□□□□□ -0.87
SMC6-204ENST00000428868 DESI2Q9BSY9 194 aa9.59□□□□□ -0.87
SMC6-204ENST00000428868 RAB20Q9NX57 234 aa9.59□□□□□ -0.87
SMC6-204ENST00000428868 ARHGAP20Q9P2F6 1191 aa9.59□□□□□ -0.87
SMC6-204ENST00000428868 APEX2Q9UBZ4 518 aa9.59□□□□□ -0.87
SMC6-204ENST00000428868 TUBGCP4Q9UGJ1 667 aa9.59□□□□□ -0.87
SMC6-204ENST00000428868 SIX4Q9UIU6 781 aa9.59□□□□□ -0.87
SMC6-204ENST00000428868 STX10O60499 249 aa9.58□□□□□ -0.88
SMC6-204ENST00000428868 NBNO60934 754 aa9.58□□□□□ -0.88
SMC6-204ENST00000428868 IL18RAPO95256 599 aa9.58□□□□□ -0.88
SMC6-204ENST00000428868 TPM1P09493 284 aa9.58□□□□□ -0.88
SMC6-204ENST00000428868 TMEM191BP0C7N4 346 aa9.58□□□□□ -0.88
SMC6-204ENST00000428868 ATF7P17544 494 aaPredicted RBP9.58□□□□□ -0.88
SMC6-204ENST00000428868 AFF1P51825 1210 aaKnown RBP9.58□□□□□ -0.88
SMC6-204ENST00000428868 MYL6P60660 151 aa9.58□□□□□ -0.88
SMC6-204ENST00000428868 ARID5AQ03989 594 aa9.58□□□□□ -0.88
SMC6-204ENST00000428868 TLE2Q04725 743 aa9.58□□□□□ -0.88
SMC6-204ENST00000428868 SOX4Q06945 474 aaPredicted RBP9.58□□□□□ -0.88
SMC6-204ENST00000428868 FAAP100Q0VG06 881 aa9.58□□□□□ -0.88
SMC6-204ENST00000428868 PAK2Q13177 524 aa9.58□□□□□ -0.88
SMC6-204ENST00000428868 DRAP1Q14919 205 aaPredicted RBP9.58□□□□□ -0.88
SMC6-204ENST00000428868 PCBP1Q15365 356 aaKnown RBP eCLIP9.58□□□□□ -0.88
SMC6-204ENST00000428868 MEA1Q16626 185 aa9.58□□□□□ -0.88
SMC6-204ENST00000428868 LRRC26Q2I0M4 334 aa9.58□□□□□ -0.88
SMC6-204ENST00000428868 ALKAL1Q6UXT8 129 aa9.58□□□□□ -0.88
SMC6-204ENST00000428868 LRRC8DQ7L1W4 858 aa9.58□□□□□ -0.88
SMC6-204ENST00000428868 RTN4RL1Q86UN2 441 aaPredicted RBP9.58□□□□□ -0.88
SMC6-204ENST00000428868 C1orf127Q8N9H9 656 aa9.58□□□□□ -0.88
SMC6-204ENST00000428868 ACRBPQ8NEB7 543 aa9.58□□□□□ -0.88
SMC6-204ENST00000428868 OR8K1Q8NGG5 319 aa9.58□□□□□ -0.88
SMC6-204ENST00000428868 KIAA1524Q8TCG1 905 aa9.58□□□□□ -0.88
SMC6-204ENST00000428868 CCDC51Q96ER9 411 aa9.58□□□□□ -0.88
SMC6-204ENST00000428868 SCLYQ96I15 445 aa9.58□□□□□ -0.88
SMC6-204ENST00000428868 PAWRQ96IZ0 340 aaKnown RBP9.58□□□□□ -0.88
SMC6-204ENST00000428868 ZFP42Q96MM3 310 aa9.58□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 43.2 ms