RNA–Protein interactions for RNA: ENST00000428361.5

CTDSP1-202, Transcript of CTD small phosphatase 1, humanhuman

TSL 5

Gene CTDSP1, Length 842 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDSP1-202ENST00000428361 FGFR3P22607 806 aa16.93■□□□□ 0.3
CTDSP1-202ENST00000428361 PROZP22891 400 aa16.93■□□□□ 0.3
CTDSP1-202ENST00000428361 RPL9P32969 192 aaKnown RBP16.93■□□□□ 0.3
CTDSP1-202ENST00000428361 VCPP55072 806 aaKnown RBP16.93■□□□□ 0.3
CTDSP1-202ENST00000428361 MAPK7Q13164 816 aa16.93■□□□□ 0.3
CTDSP1-202ENST00000428361 RAB33AQ14088 237 aa16.93■□□□□ 0.3
CTDSP1-202ENST00000428361 NOLC1Q14978 699 aaKnown RBP eCLIP16.93■□□□□ 0.3
CTDSP1-202ENST00000428361 XKR4Q5GH76 650 aa16.93■□□□□ 0.3
CTDSP1-202ENST00000428361 IER5LQ5T953 404 aa16.93■□□□□ 0.3
CTDSP1-202ENST00000428361 SPATA31D4Q6ZUB0 917 aa16.93■□□□□ 0.3
CTDSP1-202ENST00000428361 SNX27Q96L92 541 aa16.93■□□□□ 0.3
CTDSP1-202ENST00000428361 TBC1D32Q96NH3 1257 aa16.93■□□□□ 0.3
CTDSP1-202ENST00000428361 CLSTN3Q9BQT9 956 aa16.93■□□□□ 0.3
CTDSP1-202ENST00000428361 POLD4Q9HCU8 107 aa16.93■□□□□ 0.3
CTDSP1-202ENST00000428361 CACNG4Q9UBN1 327 aa16.93■□□□□ 0.3
CTDSP1-202ENST00000428361 USP20Q9Y2K6 914 aa16.93■□□□□ 0.3
CTDSP1-202ENST00000428361 BACE2Q9Y5Z0 518 aa16.93■□□□□ 0.3
CTDSP1-202ENST00000428361 SYN3O14994 580 aa16.92■□□□□ 0.3
CTDSP1-202ENST00000428361 CLDN3O15551 220 aa16.92■□□□□ 0.3
CTDSP1-202ENST00000428361 GALR2O43603 387 aaPredicted RBP16.92■□□□□ 0.3
CTDSP1-202ENST00000428361 KCNE1P15382 129 aa16.92■□□□□ 0.3
CTDSP1-202ENST00000428361 RFX1P22670 979 aa16.92■□□□□ 0.3
CTDSP1-202ENST00000428361 FSHRP23945 695 aa16.92■□□□□ 0.3
CTDSP1-202ENST00000428361 LONP1P36776 959 aaKnown RBP16.92■□□□□ 0.3
CTDSP1-202ENST00000428361 CLCNKBP51801 687 aa16.92■□□□□ 0.3
CTDSP1-202ENST00000428361 SLC12A3P55017 1021 aa16.92■□□□□ 0.3
CTDSP1-202ENST00000428361 ALKAL1Q6UXT8 129 aa16.92■□□□□ 0.3
CTDSP1-202ENST00000428361 GET4Q7L5D6 327 aaPredicted RBP16.92■□□□□ 0.3
CTDSP1-202ENST00000428361 KCNK18Q7Z418 384 aa16.92■□□□□ 0.3
CTDSP1-202ENST00000428361 KCNN1Q92952 543 aa16.92■□□□□ 0.3
CTDSP1-202ENST00000428361 BICD1Q96G01 975 aa16.92■□□□□ 0.3
CTDSP1-202ENST00000428361 RTP3Q9BQQ7 232 aa16.92■□□□□ 0.3
CTDSP1-202ENST00000428361 CNTN3Q9P232 1028 aa16.92■□□□□ 0.3
CTDSP1-202ENST00000428361 ANKFY1Q9P2R3 1169 aa16.92■□□□□ 0.3
CTDSP1-202ENST00000428361 NUB1Q9Y5A7 615 aa16.92■□□□□ 0.3
CTDSP1-202ENST00000428361 H7C4K7 107 aa16.91■□□□□ 0.3
CTDSP1-202ENST00000428361 XPOTO43592 962 aaKnown RBP16.91■□□□□ 0.3
CTDSP1-202ENST00000428361 OR1D2P34982 312 aa16.91■□□□□ 0.3
CTDSP1-202ENST00000428361 MATR3P43243 847 aaKnown RBP eCLIP16.91■□□□□ 0.3
CTDSP1-202ENST00000428361 OSTNP61366 133 aa16.91■□□□□ 0.3
CTDSP1-202ENST00000428361 TCF15Q12870 199 aa16.91■□□□□ 0.3
CTDSP1-202ENST00000428361 TMEM119Q4V9L6 283 aa16.91■□□□□ 0.3
CTDSP1-202ENST00000428361 MTSS1LQ765P7 747 aa16.91■□□□□ 0.3
CTDSP1-202ENST00000428361 TAS1R3Q7RTX0 852 aa16.91■□□□□ 0.3
CTDSP1-202ENST00000428361 CEP120Q8N960 986 aa16.91■□□□□ 0.3
CTDSP1-202ENST00000428361 TMEM161BQ8NDZ6 487 aa16.91■□□□□ 0.3
CTDSP1-202ENST00000428361 PNMA5Q96PV4 448 aa16.91■□□□□ 0.3
CTDSP1-202ENST00000428361 TSPAN18Q96SJ8 248 aa16.91■□□□□ 0.3
CTDSP1-202ENST00000428361 PLEKHA5Q9HAU0 1116 aa16.91■□□□□ 0.3
CTDSP1-202ENST00000428361 WNT16Q9UBV4 365 aa16.91■□□□□ 0.3
CTDSP1-202ENST00000428361 CACNA1HO95180 2353 aa16.91■□□□□ 0.3
CTDSP1-202ENST00000428361 MYH11P35749 1972 aa16.9■□□□□ 0.3
CTDSP1-202ENST00000428361 PODXLO00592 558 aa16.9■□□□□ 0.3
CTDSP1-202ENST00000428361 PDGFBP01127 241 aaPredicted RBP16.9■□□□□ 0.3
CTDSP1-202ENST00000428361 MYBP10242 640 aa16.9■□□□□ 0.3
CTDSP1-202ENST00000428361 MAPTP10636 758 aaKnown RBP16.9■□□□□ 0.3
CTDSP1-202ENST00000428361 SRFP11831 508 aa16.9■□□□□ 0.3
CTDSP1-202ENST00000428361 HARSP12081 509 aaKnown RBP16.9■□□□□ 0.3
CTDSP1-202ENST00000428361 LAMP2P13473 410 aa16.9■□□□□ 0.3
CTDSP1-202ENST00000428361 ELF1P32519 619 aa16.9■□□□□ 0.3
CTDSP1-202ENST00000428361 AXDND1Q5T1B0 1012 aaPredicted RBP16.9■□□□□ 0.3
CTDSP1-202ENST00000428361 FLCNQ8NFG4 579 aa16.9■□□□□ 0.3
CTDSP1-202ENST00000428361 SLC7A14Q8TBB6 771 aa16.9■□□□□ 0.3
CTDSP1-202ENST00000428361 ATOH1Q92858 354 aaPredicted RBP16.9■□□□□ 0.3
CTDSP1-202ENST00000428361 MYADMQ96S97 322 aa16.9■□□□□ 0.3
CTDSP1-202ENST00000428361 CDY1Q9Y6F8 540 aa16.9■□□□□ 0.3
CTDSP1-202ENST00000428361 CITO14578 2027 aa16.9■□□□□ 0.3
CTDSP1-202ENST00000428361 SFI1A8K8P3 1242 aa16.89■□□□□ 0.29
CTDSP1-202ENST00000428361 N4BP1O75113 896 aaKnown RBP16.89■□□□□ 0.29
CTDSP1-202ENST00000428361 FAM13AO94988 1023 aa16.89■□□□□ 0.29
CTDSP1-202ENST00000428361 CD2BP2O95400 341 aaKnown RBP16.89■□□□□ 0.29
CTDSP1-202ENST00000428361 KRT18P05783 430 aaKnown RBP16.89■□□□□ 0.29
CTDSP1-202ENST00000428361 CLTAP09496 248 aa16.89■□□□□ 0.29
CTDSP1-202ENST00000428361 LIG4P49917 911 aa16.89■□□□□ 0.29
CTDSP1-202ENST00000428361 NCKAP1LP55160 1127 aa16.89■□□□□ 0.29
CTDSP1-202ENST00000428361 MCL1Q07820 350 aa16.89■□□□□ 0.29
CTDSP1-202ENST00000428361 RAD51AP2Q09MP3 1159 aa16.89■□□□□ 0.29
CTDSP1-202ENST00000428361 GRASPQ7Z6J2 395 aaPredicted RBP16.89■□□□□ 0.29
CTDSP1-202ENST00000428361 APPL2Q8NEU8 664 aa16.89■□□□□ 0.29
CTDSP1-202ENST00000428361 PLIN2Q99541 437 aa16.89■□□□□ 0.29
CTDSP1-202ENST00000428361 OXCT2Q9BYC2 517 aaPredicted RBP16.89■□□□□ 0.29
CTDSP1-202ENST00000428361 SMOC2Q9H3U7 446 aa16.89■□□□□ 0.29
CTDSP1-202ENST00000428361 PARVGQ9HBI0 331 aa16.89■□□□□ 0.29
CTDSP1-202ENST00000428361 CDH7Q9ULB5 785 aa16.89■□□□□ 0.29
CTDSP1-202ENST00000428361 KCNH3Q9ULD8 1083 aa16.89■□□□□ 0.29
CTDSP1-202ENST00000428361 MAFFQ9ULX9 164 aa16.89■□□□□ 0.29
CTDSP1-202ENST00000428361 POLIQ9UNA4 740 aa16.89■□□□□ 0.29
CTDSP1-202ENST00000428361 ABLIM1O14639 778 aa16.88■□□□□ 0.29
CTDSP1-202ENST00000428361 HNRNPDLO14979 420 aaKnown RBP16.88■□□□□ 0.29
CTDSP1-202ENST00000428361 TBCAO75347 108 aaKnown RBP16.88■□□□□ 0.29
CTDSP1-202ENST00000428361 AOC1P19801 751 aa16.88■□□□□ 0.29
CTDSP1-202ENST00000428361 TKTP29401 623 aaKnown RBP16.88■□□□□ 0.29
CTDSP1-202ENST00000428361 PPP2R3AQ06190 1150 aa16.88■□□□□ 0.29
CTDSP1-202ENST00000428361 SLC8B1Q6J4K2 584 aa16.88■□□□□ 0.29
CTDSP1-202ENST00000428361 HAUS6Q7Z4H7 955 aa16.88■□□□□ 0.29
CTDSP1-202ENST00000428361 GPBP1Q86WP2 473 aa16.88■□□□□ 0.29
CTDSP1-202ENST00000428361 SIX5Q8N196 739 aa16.88■□□□□ 0.29
CTDSP1-202ENST00000428361 SLC44A3Q8N4M1 653 aa16.88■□□□□ 0.29
CTDSP1-202ENST00000428361 ZNF461Q8TAF7 563 aa16.88■□□□□ 0.29
CTDSP1-202ENST00000428361 CXCL16Q9H2A7 254 aa16.88■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 41.3 ms