RNA–Protein interactions for RNA: ENST00000428021.1

VRK2-204, Transcript of vaccinia related kinase 2, humanhuman

TSL 4

Gene VRK2, Length 553 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK2-204ENST00000428021 CASP1P29466 404 aa18.21■□□□□ 0.51
VRK2-204ENST00000428021 ADSSP30520 456 aa18.21■□□□□ 0.51
VRK2-204ENST00000428021 CA8P35219 290 aa18.21■□□□□ 0.51
VRK2-204ENST00000428021 CLCNKBP51801 687 aa18.21■□□□□ 0.51
VRK2-204ENST00000428021 ASIC1P78348 528 aa18.21■□□□□ 0.51
VRK2-204ENST00000428021 DSG1Q02413 1049 aa18.21■□□□□ 0.51
VRK2-204ENST00000428021 ENOX2Q16206 610 aaKnown RBP18.21■□□□□ 0.51
VRK2-204ENST00000428021 UPP1Q16831 310 aa18.21■□□□□ 0.51
VRK2-204ENST00000428021 PUS10Q3MIT2 529 aaKnown RBP18.21■□□□□ 0.51
VRK2-204ENST00000428021 LLGL2Q6P1M3 1020 aa18.21■□□□□ 0.51
VRK2-204ENST00000428021 GLIS3Q8NEA6 775 aa18.21■□□□□ 0.51
VRK2-204ENST00000428021 HASPINQ8TF76 798 aa18.21■□□□□ 0.51
VRK2-204ENST00000428021 SLC22A17Q8WUG5 538 aa18.21■□□□□ 0.51
VRK2-204ENST00000428021 HPS3Q969F9 1004 aa18.21■□□□□ 0.51
VRK2-204ENST00000428021 C18orf25Q96B23 403 aaPredicted RBP18.21■□□□□ 0.51
VRK2-204ENST00000428021 B3GALT6Q96L58 329 aa18.21■□□□□ 0.51
VRK2-204ENST00000428021 KLHL5Q96PQ7 755 aa18.21■□□□□ 0.51
VRK2-204ENST00000428021 MSTO1Q9BUK6 570 aa18.21■□□□□ 0.51
VRK2-204ENST00000428021 PLEKHA5Q9HAU0 1116 aa18.21■□□□□ 0.51
VRK2-204ENST00000428021 GDPD2Q9HCC8 539 aa18.21■□□□□ 0.51
VRK2-204ENST00000428021 MRPL17Q9NRX2 175 aaKnown RBP18.21■□□□□ 0.51
VRK2-204ENST00000428021 SERTAD1Q9UHV2 236 aa18.21■□□□□ 0.51
VRK2-204ENST00000428021 PCDHB13Q9Y5F0 798 aa18.21■□□□□ 0.51
VRK2-204ENST00000428021 BDP1A6H8Y1 2624 aa18.21■□□□□ 0.51
VRK2-204ENST00000428021 TMEM189-UBE2V1I3L0A0 370 aa18.2■□□□□ 0.5
VRK2-204ENST00000428021 C2CD2LO14523 706 aa18.2■□□□□ 0.5
VRK2-204ENST00000428021 MBTPS2O43462 519 aa18.2■□□□□ 0.5
VRK2-204ENST00000428021 URODP06132 367 aa18.2■□□□□ 0.5
VRK2-204ENST00000428021 GLUD2P49448 558 aa18.2■□□□□ 0.5
VRK2-204ENST00000428021 EHHADHQ08426 723 aa18.2■□□□□ 0.5
VRK2-204ENST00000428021 ALCAMQ13740 583 aa18.2■□□□□ 0.5
VRK2-204ENST00000428021 KYAT1Q16773 422 aa18.2■□□□□ 0.5
VRK2-204ENST00000428021 DCLRE1AQ6PJP8 1040 aa18.2■□□□□ 0.5
VRK2-204ENST00000428021 GRAMD1CQ8IYS0 662 aa18.2■□□□□ 0.5
VRK2-204ENST00000428021 SMRP1Q8NCR6 262 aa18.2■□□□□ 0.5
VRK2-204ENST00000428021 C3orf58Q8NDZ4 430 aa18.2■□□□□ 0.5
VRK2-204ENST00000428021 UROC1Q96N76 676 aa18.2■□□□□ 0.5
VRK2-204ENST00000428021 ACCSQ96QU6 501 aa18.2■□□□□ 0.5
VRK2-204ENST00000428021 UHRF1Q96T88 793 aaPredicted RBP18.2■□□□□ 0.5
VRK2-204ENST00000428021 PYM1Q9BRP8 204 aaKnown RBP18.2■□□□□ 0.5
VRK2-204ENST00000428021 BLZF1Q9H2G9 400 aa18.2■□□□□ 0.5
VRK2-204ENST00000428021 RXFP1Q9HBX9 757 aa18.2■□□□□ 0.5
VRK2-204ENST00000428021 SLC38A7Q9NVC3 462 aa18.2■□□□□ 0.5
VRK2-204ENST00000428021 CPSF3Q9UKF6 684 aaKnown RBP18.2■□□□□ 0.5
VRK2-204ENST00000428021 LACTBL1A8MY62 500 aa18.19■□□□□ 0.5
VRK2-204ENST00000428021 PRPF6O94906 941 aaKnown RBP18.19■□□□□ 0.5
VRK2-204ENST00000428021 AFMP43652 599 aa18.19■□□□□ 0.5
VRK2-204ENST00000428021 SPAG1Q07617 926 aa18.19■□□□□ 0.5
VRK2-204ENST00000428021 SMAD4Q13485 552 aaKnown RBP18.19■□□□□ 0.5
VRK2-204ENST00000428021 CUL4BQ13620 913 aa18.19■□□□□ 0.5
VRK2-204ENST00000428021 ZBTB6Q15916 424 aa18.19■□□□□ 0.5
VRK2-204ENST00000428021 USP41Q3LFD5 358 aa18.19■□□□□ 0.5
VRK2-204ENST00000428021 SLFN12LQ6IEE8 588 aa18.19■□□□□ 0.5
VRK2-204ENST00000428021 ANKRD54Q6NXT1 300 aa18.19■□□□□ 0.5
VRK2-204ENST00000428021 SYCE2Q6PIF2 218 aa18.19■□□□□ 0.5
VRK2-204ENST00000428021 UNC13DQ70J99 1090 aa18.19■□□□□ 0.5
VRK2-204ENST00000428021 GPR65Q8IYL9 337 aa18.19■□□□□ 0.5
VRK2-204ENST00000428021 TMEM130Q8N3G9 435 aa18.19■□□□□ 0.5
VRK2-204ENST00000428021 PAGE5Q96GU1 130 aa18.19■□□□□ 0.5
VRK2-204ENST00000428021 S1PR5Q9H228 398 aa18.19■□□□□ 0.5
VRK2-204ENST00000428021 VWA8A3KMH1 1905 aa18.19■□□□□ 0.5
VRK2-204ENST00000428021 SF3B1O75533 1304 aaKnown RBP eCLIP18.19■□□□□ 0.51e-13■■■■■ 310.2
VRK2-204ENST00000428021 ANK1P16157 1881 aa18.18■□□□□ 0.5
VRK2-204ENST00000428021 A0A1W2PQ27 194 aa18.18■□□□□ 0.5
VRK2-204ENST00000428021 A0A1W2PQ64 194 aa18.18■□□□□ 0.5
VRK2-204ENST00000428021 A0A1W2PQD8 194 aa18.18■□□□□ 0.5
VRK2-204ENST00000428021 TEX28O15482 410 aa18.18■□□□□ 0.5
VRK2-204ENST00000428021 B3GAT3O94766 335 aa18.18■□□□□ 0.5
VRK2-204ENST00000428021 EPCAMP16422 314 aa18.18■□□□□ 0.5
VRK2-204ENST00000428021 HOXD13P35453 343 aa18.18■□□□□ 0.5
VRK2-204ENST00000428021 ACOT2P49753 483 aa18.18■□□□□ 0.5
VRK2-204ENST00000428021 NDUFA8P51970 172 aa18.18■□□□□ 0.5
VRK2-204ENST00000428021 SMAD2Q15796 467 aaKnown RBP18.18■□□□□ 0.5
VRK2-204ENST00000428021 RTP2Q5QGT7 225 aa18.18■□□□□ 0.5
VRK2-204ENST00000428021 FAM171A1Q5VUB5 890 aa18.18■□□□□ 0.5
VRK2-204ENST00000428021 CRELD2Q6UXH1 353 aaPredicted RBP18.18■□□□□ 0.5
VRK2-204ENST00000428021 EPM2AIP1Q7L775 607 aaPredicted RBP18.18■□□□□ 0.5
VRK2-204ENST00000428021 CEP57L1Q8IYX8 460 aa18.18■□□□□ 0.5
VRK2-204ENST00000428021 CASP10Q92851 521 aa18.18■□□□□ 0.5
VRK2-204ENST00000428021 DDX27Q96GQ7 796 aaKnown RBP18.18■□□□□ 0.5
VRK2-204ENST00000428021 EMILIN2Q9BXX0 1053 aa18.18■□□□□ 0.5
VRK2-204ENST00000428021 GOLPH3LQ9H4A5 285 aa18.18■□□□□ 0.5
VRK2-204ENST00000428021 RPF1Q9H9Y2 349 aaKnown RBP18.18■□□□□ 0.5
VRK2-204ENST00000428021 TUBGCP4Q9UGJ1 667 aa18.18■□□□□ 0.5
VRK2-204ENST00000428021 AGO2Q9UKV8 859 aaKnown RBP18.18■□□□□ 0.5
VRK2-204ENST00000428021 EXOC7Q9UPT5 735 aa18.18■□□□□ 0.5
VRK2-204ENST00000428021 SSX2IPQ9Y2D8 614 aa18.18■□□□□ 0.5
VRK2-204ENST00000428021 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP18.17■□□□□ 0.5
VRK2-204ENST00000428021 PODXLO00592 558 aa18.17■□□□□ 0.5
VRK2-204ENST00000428021 RPL9P32969 192 aaKnown RBP18.17■□□□□ 0.5
VRK2-204ENST00000428021 CLCN4P51793 760 aa18.17■□□□□ 0.5
VRK2-204ENST00000428021 FAM26FQ5R3K3 315 aa18.17■□□□□ 0.5
VRK2-204ENST00000428021 KIAA1841Q6NSI8 718 aa18.17■□□□□ 0.5
VRK2-204ENST00000428021 TMEM87AQ8NBN3 555 aa18.17■□□□□ 0.5
VRK2-204ENST00000428021 ZSWIM2Q8NEG5 633 aa18.17■□□□□ 0.5
VRK2-204ENST00000428021 RIN2Q8WYP3 895 aaPredicted RBP18.17■□□□□ 0.5
VRK2-204ENST00000428021 POMGNT1Q8WZA1 660 aa18.17■□□□□ 0.5
VRK2-204ENST00000428021 TTPALQ9BTX7 342 aa18.17■□□□□ 0.5
VRK2-204ENST00000428021 USP25Q9UHP3 1055 aa18.17■□□□□ 0.5
VRK2-204ENST00000428021 PLXNA3P51805 1871 aa18.16■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 50.2 ms