RNA–Protein interactions for RNA: ENST00000427926.5

CLTCL1-202, Transcript of clathrin heavy chain like 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CLTCL1, Length 5,513 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLTCL1-202ENST00000427926 LAMB3Q13751 1172 aa10.5□□□□□ -0.73
CLTCL1-202ENST00000427926 WHAMMQ8TF30 809 aa10.5□□□□□ -0.73
CLTCL1-202ENST00000427926 PPP1R13BQ96KQ4 1090 aa10.5□□□□□ -0.73
CLTCL1-202ENST00000427926 SERPINI1Q99574 410 aa10.5□□□□□ -0.73
CLTCL1-202ENST00000427926 TACO1Q9BSH4 297 aaKnown RBP10.5□□□□□ -0.73
CLTCL1-202ENST00000427926 SPTLC3Q9NUV7 552 aa10.5□□□□□ -0.73
CLTCL1-202ENST00000427926 DNAJC17Q9NVM6 304 aaKnown RBP10.5□□□□□ -0.73
CLTCL1-202ENST00000427926 C3orf70A6NLC5 250 aaPredicted RBP10.49□□□□□ -0.73
CLTCL1-202ENST00000427926 MIF4GDA9UHW6 222 aaKnown RBP10.49□□□□□ -0.73
CLTCL1-202ENST00000427926 EPB42P16452 691 aa10.49□□□□□ -0.73
CLTCL1-202ENST00000427926 KLRC2P26717 231 aa10.49□□□□□ -0.73
CLTCL1-202ENST00000427926 SLCO1A2P46721 670 aa10.49□□□□□ -0.73
CLTCL1-202ENST00000427926 DHX9Q08211 1270 aaKnown RBP10.49□□□□□ -0.73
CLTCL1-202ENST00000427926 RIN2Q8WYP3 895 aaPredicted RBP10.49□□□□□ -0.73
CLTCL1-202ENST00000427926 MAML1Q92585 1016 aa10.49□□□□□ -0.73
CLTCL1-202ENST00000427926 MTBPQ96DY7 904 aa10.49□□□□□ -0.73
CLTCL1-202ENST00000427926 L3MBTL3Q96JM7 780 aaPredicted RBP10.49□□□□□ -0.73
CLTCL1-202ENST00000427926 NUP85Q9BW27 656 aa10.49□□□□□ -0.73
CLTCL1-202ENST00000427926 NFKBIZQ9BYH8 718 aa10.49□□□□□ -0.73
CLTCL1-202ENST00000427926 CATSPERBQ9H7T0 1116 aa10.49□□□□□ -0.73
CLTCL1-202ENST00000427926 CAMSAP3Q9P1Y5 1249 aaPredicted RBP10.49□□□□□ -0.73
CLTCL1-202ENST00000427926 USP31Q70CQ4 1352 aa10.49□□□□□ -0.73
CLTCL1-202ENST00000427926 ZSCAN9O15535 394 aaPredicted RBP10.49□□□□□ -0.73
CLTCL1-202ENST00000427926 ATP9BO43861 1147 aa10.49□□□□□ -0.73
CLTCL1-202ENST00000427926 CDC25BP30305 580 aa10.49□□□□□ -0.73
CLTCL1-202ENST00000427926 ACOT2P49753 483 aa10.49□□□□□ -0.73
CLTCL1-202ENST00000427926 TAF6P49848 677 aa10.49□□□□□ -0.73
CLTCL1-202ENST00000427926 RCAN1P53805 252 aa10.49□□□□□ -0.73
CLTCL1-202ENST00000427926 ZNF543Q08ER8 600 aa10.49□□□□□ -0.73
CLTCL1-202ENST00000427926 POLD3Q15054 466 aaPredicted RBP10.49□□□□□ -0.73
CLTCL1-202ENST00000427926 DEFB115Q30KQ5 88 aa10.49□□□□□ -0.73
CLTCL1-202ENST00000427926 ACAD11Q709F0 780 aa10.49□□□□□ -0.73
CLTCL1-202ENST00000427926 ZNF564Q8TBZ8 553 aaPredicted RBP10.49□□□□□ -0.73
CLTCL1-202ENST00000427926 CALR3Q96L12 384 aaKnown RBP10.49□□□□□ -0.73
CLTCL1-202ENST00000427926 MOV10L1Q9BXT6 1211 aaKnown RBP10.49□□□□□ -0.73
CLTCL1-202ENST00000427926 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP10.49□□□□□ -0.731e-15■■■■■ 72.7
CLTCL1-202ENST00000427926 RNF14Q9UBS8 474 aa10.49□□□□□ -0.73
CLTCL1-202ENST00000427926 C1orf167Q5SNV9 1468 aa10.49□□□□□ -0.73
CLTCL1-202ENST00000427926 USP42Q9H9J4 1324 aaKnown RBP10.49□□□□□ -0.73
CLTCL1-202ENST00000427926 PDHXO00330 501 aa10.49□□□□□ -0.73
CLTCL1-202ENST00000427926 MYL4P12829 197 aa10.49□□□□□ -0.73
CLTCL1-202ENST00000427926 CXCR5P32302 372 aa10.49□□□□□ -0.73
CLTCL1-202ENST00000427926 MMP14P50281 582 aa10.49□□□□□ -0.73
CLTCL1-202ENST00000427926 XRRA1Q6P2D8 792 aa10.49□□□□□ -0.73
CLTCL1-202ENST00000427926 ENGASEQ8NFI3 743 aa10.49□□□□□ -0.73
CLTCL1-202ENST00000427926 GPR63Q9BZJ6 419 aa10.49□□□□□ -0.73
CLTCL1-202ENST00000427926 PARVAQ9NVD7 372 aa10.49□□□□□ -0.73
CLTCL1-202ENST00000427926 NDUFS3O75489 264 aa10.49□□□□□ -0.73
CLTCL1-202ENST00000427926 DNAJC8O75937 253 aaPredicted RBP10.49□□□□□ -0.73
CLTCL1-202ENST00000427926 CKBP12277 381 aa10.49□□□□□ -0.73
CLTCL1-202ENST00000427926 EEF1B2P24534 225 aaKnown RBP10.49□□□□□ -0.73
CLTCL1-202ENST00000427926 KCNH2Q12809 1159 aa10.49□□□□□ -0.73
CLTCL1-202ENST00000427926 CES5AQ6NT32 575 aa10.49□□□□□ -0.73
CLTCL1-202ENST00000427926 CRLF3Q8IUI8 442 aa10.49□□□□□ -0.73
CLTCL1-202ENST00000427926 LRRC8AQ8IWT6 810 aa10.49□□□□□ -0.73
CLTCL1-202ENST00000427926 SLC35F6Q8N357 371 aa10.49□□□□□ -0.73
CLTCL1-202ENST00000427926 CEP72Q9P209 647 aa10.49□□□□□ -0.73
CLTCL1-202ENST00000427926 PYCARDQ9ULZ3 195 aa10.49□□□□□ -0.73
CLTCL1-202ENST00000427926 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP10.48□□□□□ -0.73
CLTCL1-202ENST00000427926 TBKBP1A7MCY6 615 aa10.48□□□□□ -0.73
CLTCL1-202ENST00000427926 C5orf58C9J3I9 102 aa10.48□□□□□ -0.73
CLTCL1-202ENST00000427926 GOLGA8MH3BSY2 632 aa10.48□□□□□ -0.73
CLTCL1-202ENST00000427926 DYRK3O43781 588 aa10.48□□□□□ -0.73
CLTCL1-202ENST00000427926 ZBTB17Q13105 803 aa10.48□□□□□ -0.73
CLTCL1-202ENST00000427926 ZNF177Q13360 481 aaPredicted RBP10.48□□□□□ -0.73
CLTCL1-202ENST00000427926 SGSM1Q2NKQ1 1148 aa10.48□□□□□ -0.73
CLTCL1-202ENST00000427926 CYB5R4Q7L1T6 521 aa10.48□□□□□ -0.73
CLTCL1-202ENST00000427926 ITIH5Q86UX2 942 aa10.48□□□□□ -0.73
CLTCL1-202ENST00000427926 CXorf38Q8TB03 319 aa10.48□□□□□ -0.73
CLTCL1-202ENST00000427926 USP33Q8TEY7 942 aa10.48□□□□□ -0.73
CLTCL1-202ENST00000427926 MTA3Q9BTC8 594 aa10.48□□□□□ -0.73
CLTCL1-202ENST00000427926 DIS3Q9Y2L1 958 aaKnown RBP10.48□□□□□ -0.73
CLTCL1-202ENST00000427926 EMSYQ7Z589 1322 aa10.48□□□□□ -0.73
CLTCL1-202ENST00000427926 STK36Q9NRP7 1315 aa10.48□□□□□ -0.73
CLTCL1-202ENST00000427926 ZC3H13Q5T200 1668 aaKnown RBP10.48□□□□□ -0.73
CLTCL1-202ENST00000427926 TLR2O60603 784 aa10.48□□□□□ -0.73
CLTCL1-202ENST00000427926 B3GAT3O94766 335 aa10.48□□□□□ -0.73
CLTCL1-202ENST00000427926 FGGP02679 453 aa10.48□□□□□ -0.73
CLTCL1-202ENST00000427926 DEUP1Q05D60 604 aa10.48□□□□□ -0.73
CLTCL1-202ENST00000427926 PDAP1Q13442 181 aaKnown RBP10.48□□□□□ -0.73
CLTCL1-202ENST00000427926 CTXN3Q4LDR2 81 aa10.48□□□□□ -0.73
CLTCL1-202ENST00000427926 KHDRBS2Q5VWX1 349 aaKnown RBP10.48□□□□□ -0.73
CLTCL1-202ENST00000427926 TBC1D1Q86TI0 1168 aaPredicted RBP10.48□□□□□ -0.73
CLTCL1-202ENST00000427926 SOCS4Q8WXH5 440 aa10.48□□□□□ -0.73
CLTCL1-202ENST00000427926 ZFP42Q96MM3 310 aa10.48□□□□□ -0.73
CLTCL1-202ENST00000427926 GBP5Q96PP8 586 aa10.48□□□□□ -0.73
CLTCL1-202ENST00000427926 BUD13Q9BRD0 619 aaKnown RBP eCLIP10.48□□□□□ -0.73
CLTCL1-202ENST00000427926 SH2D3AQ9BRG2 576 aa10.48□□□□□ -0.73
CLTCL1-202ENST00000427926 AP1M1Q9BXS5 423 aa10.48□□□□□ -0.73
CLTCL1-202ENST00000427926 TUBE1Q9UJT0 475 aa10.48□□□□□ -0.73
CLTCL1-202ENST00000427926 PACSIN2Q9UNF0 486 aaPredicted RBP10.48□□□□□ -0.73
CLTCL1-202ENST00000427926 AP3B1O00203 1094 aa10.48□□□□□ -0.73
CLTCL1-202ENST00000427926 OAS2P29728 719 aaKnown RBP10.48□□□□□ -0.73
CLTCL1-202ENST00000427926 ACADSBP45954 432 aa10.48□□□□□ -0.73
CLTCL1-202ENST00000427926 DPCR1Q3MIW9 517 aa10.48□□□□□ -0.73
CLTCL1-202ENST00000427926 PREPLQ4J6C6 727 aaPredicted RBP10.48□□□□□ -0.73
CLTCL1-202ENST00000427926 FASTKD1Q53R41 847 aaKnown RBP10.48□□□□□ -0.73
CLTCL1-202ENST00000427926 DDIASQ8IXT1 998 aa10.48□□□□□ -0.73
CLTCL1-202ENST00000427926 FBXO41Q8TF61 875 aa10.48□□□□□ -0.73
CLTCL1-202ENST00000427926 RABGGTAQ92696 567 aa10.48□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 62.4 ms