RNA–Protein interactions for RNA: ENST00000427561.5

UBA1-205, Transcript of ubiquitin like modifier activating enzyme 1, humanhuman

TSL 5

Gene UBA1, Length 671 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBA1-205ENST00000427561 UPP1Q16831 310 aa15.04■□□□□ -0
UBA1-205ENST00000427561 PABPC1LQ4VXU2 614 aaKnown RBP15.04■□□□□ -0
UBA1-205ENST00000427561 SLC44A4Q53GD3 710 aa15.04■□□□□ -0
UBA1-205ENST00000427561 TTC38Q5R3I4 469 aa15.04■□□□□ -0
UBA1-205ENST00000427561 ANKS3Q6ZW76 656 aa15.04■□□□□ -0
UBA1-205ENST00000427561 KIFC3Q9BVG8 833 aa15.04■□□□□ -0
UBA1-205ENST00000427561 HCFC1R1Q9NWW0 138 aa15.04■□□□□ -0
UBA1-205ENST00000427561 DNMT3BQ9UBC3 853 aaKnown RBP15.04■□□□□ -0
UBA1-205ENST00000427561 LRWD1Q9UFC0 647 aa15.04■□□□□ -0
UBA1-205ENST00000427561 TNFSF13BQ9Y275 285 aa15.04■□□□□ -0
UBA1-205ENST00000427561 RIF1Q5UIP0 2472 aaKnown RBP15.03■□□□□ -0
UBA1-205ENST00000427561 CACNA1IQ9P0X4 2223 aa15.03■□□□□ -0
UBA1-205ENST00000427561 SMIM28A0A1B0GU29 152 aa15.03■□□□□ -0
UBA1-205ENST00000427561 IGFBP6P24592 240 aaPredicted RBP15.03■□□□□ -0
UBA1-205ENST00000427561 TKTP29401 623 aaKnown RBP15.03■□□□□ -0
UBA1-205ENST00000427561 TRAPPC10P48553 1259 aa15.03■□□□□ -0
UBA1-205ENST00000427561 FXR2P51116 673 aaKnown RBP eCLIP15.03■□□□□ -0
UBA1-205ENST00000427561 GNL2Q13823 731 aaKnown RBP15.03■□□□□ -0
UBA1-205ENST00000427561 MLF2Q15773 248 aaPredicted RBP15.03■□□□□ -0
UBA1-205ENST00000427561 ECM1Q16610 540 aa15.03■□□□□ -0
UBA1-205ENST00000427561 CD300LGQ6UXG3 332 aa15.03■□□□□ -0
UBA1-205ENST00000427561 RSPO2Q6UXX9 243 aaPredicted RBP15.03■□□□□ -0
UBA1-205ENST00000427561 DDX27Q96GQ7 796 aaKnown RBP15.03■□□□□ -0
UBA1-205ENST00000427561 LLPHQ9BRT6 129 aaKnown RBP15.03■□□□□ -0
UBA1-205ENST00000427561 DDX23Q9BUQ8 820 aaKnown RBP15.03■□□□□ -0
UBA1-205ENST00000427561 CCDC94Q9BW85 323 aaPredicted RBP15.03■□□□□ -0
UBA1-205ENST00000427561 BCO2Q9BYV7 579 aa15.03■□□□□ -0
UBA1-205ENST00000427561 OSBPL6Q9BZF3 934 aa15.03■□□□□ -0
UBA1-205ENST00000427561 TOPORSQ9NS56 1045 aaPredicted RBP15.03■□□□□ -0
UBA1-205ENST00000427561 NOL7Q9UMY1 257 aaKnown RBP15.03■□□□□ -0
UBA1-205ENST00000427561 LIMCH1Q9UPQ0 1083 aa15.03■□□□□ -0
UBA1-205ENST00000427561 KIAA1024Q9UPX6 916 aa15.03■□□□□ -0
UBA1-205ENST00000427561 MRPS23Q9Y3D9 190 aaKnown RBP15.03■□□□□ -0
UBA1-205ENST00000427561 STK24Q9Y6E0 443 aa15.03■□□□□ -0
UBA1-205ENST00000427561 PDCD11Q14690 1871 aaKnown RBP15.02■□□□□ -0
UBA1-205ENST00000427561 CCDC169A6NNP5 214 aa15.02■□□□□ -0
UBA1-205ENST00000427561 I3L4J1 428 aa15.02■□□□□ -0
UBA1-205ENST00000427561 LRRN2O75325 713 aa15.02■□□□□ -0
UBA1-205ENST00000427561 GLULP15104 373 aa15.02■□□□□ -0
UBA1-205ENST00000427561 ELF1P32519 619 aa15.02■□□□□ -0
UBA1-205ENST00000427561 GRM5P41594 1212 aa15.02■□□□□ -0
UBA1-205ENST00000427561 BRCC3P46736 316 aa15.02■□□□□ -0
UBA1-205ENST00000427561 PDIA5Q14554 519 aa15.02■□□□□ -0
UBA1-205ENST00000427561 CCDC83Q8IWF9 413 aa15.02■□□□□ -0
UBA1-205ENST00000427561 NPAS3Q8IXF0 933 aa15.02■□□□□ -0
UBA1-205ENST00000427561 FBXO18Q8NFZ0 1043 aa15.02■□□□□ -0
UBA1-205ENST00000427561 ZNF461Q8TAF7 563 aa15.02■□□□□ -0
UBA1-205ENST00000427561 KXD1Q9BQD3 176 aa15.02■□□□□ -0
UBA1-205ENST00000427561 RAB34Q9BZG1 259 aa15.02■□□□□ -0
UBA1-205ENST00000427561 TMEM134Q9H6X4 195 aa15.02■□□□□ -0
UBA1-205ENST00000427561 GOLGA2P5Q9HBQ8 144 aa15.02■□□□□ -0
UBA1-205ENST00000427561 DDX19AQ9NUU7 478 aaKnown RBP15.02■□□□□ -0
UBA1-205ENST00000427561 SLC38A7Q9NVC3 462 aa15.02■□□□□ -0
UBA1-205ENST00000427561 PHLPP2Q6ZVD8 1323 aa15.01□□□□□ -0.01
UBA1-205ENST00000427561 LRG1P02750 347 aa15.01□□□□□ -0.01
UBA1-205ENST00000427561 RHOP08100 348 aa15.01□□□□□ -0.01
UBA1-205ENST00000427561 PTPN2P17706 415 aa15.01□□□□□ -0.01
UBA1-205ENST00000427561 PEX3P56589 373 aa15.01□□□□□ -0.01
UBA1-205ENST00000427561 HMGN5P82970 282 aaKnown RBP15.01□□□□□ -0.01
UBA1-205ENST00000427561 UBXN2BQ14CS0 331 aa15.01□□□□□ -0.01
UBA1-205ENST00000427561 ZNF568Q3ZCX4 644 aa15.01□□□□□ -0.01
UBA1-205ENST00000427561 XKR4Q5GH76 650 aa15.01□□□□□ -0.01
UBA1-205ENST00000427561 ALKAL1Q6UXT8 129 aa15.01□□□□□ -0.01
UBA1-205ENST00000427561 C4orf32Q8N8J7 132 aa15.01□□□□□ -0.01
UBA1-205ENST00000427561 CEP120Q8N960 986 aa15.01□□□□□ -0.01
UBA1-205ENST00000427561 FAM184AQ8NB25 1140 aa15.01□□□□□ -0.01
UBA1-205ENST00000427561 C3orf58Q8NDZ4 430 aa15.01□□□□□ -0.01
UBA1-205ENST00000427561 ING5Q8WYH8 240 aa15.01□□□□□ -0.01
UBA1-205ENST00000427561 MCRS1Q96EZ8 462 aa15.01□□□□□ -0.01
UBA1-205ENST00000427561 BORCS6Q96GS4 357 aa15.01□□□□□ -0.01
UBA1-205ENST00000427561 NELL2Q99435 816 aa15.01□□□□□ -0.01
UBA1-205ENST00000427561 ACO2Q99798 780 aaKnown RBP15.01□□□□□ -0.01
UBA1-205ENST00000427561 HINFPQ9BQA5 517 aa15.01□□□□□ -0.01
UBA1-205ENST00000427561 MRPL4Q9BYD3 311 aaKnown RBP15.01□□□□□ -0.01
UBA1-205ENST00000427561 CDT1Q9H211 546 aa15.01□□□□□ -0.01
UBA1-205ENST00000427561 PTPRHQ9HD43 1115 aa15.01□□□□□ -0.01
UBA1-205ENST00000427561 AVENQ9NQS1 362 aaPredicted RBP15.01□□□□□ -0.01
UBA1-205ENST00000427561 SPATA6Q9NWH7 488 aaPredicted RBP15.01□□□□□ -0.01
UBA1-205ENST00000427561 GDE1Q9NZC3 331 aa15.01□□□□□ -0.01
UBA1-205ENST00000427561 DNM3Q9UQ16 869 aa15.01□□□□□ -0.01
UBA1-205ENST00000427561 CFAP54Q96N23 3096 aa15.01□□□□□ -0.01
UBA1-205ENST00000427561 COL4A3Q01955 1670 aa15□□□□□ -0.01
UBA1-205ENST00000427561 ARHGEF37A1IGU5 675 aa15□□□□□ -0.01
UBA1-205ENST00000427561 FAM170BA6NMN3 283 aa15□□□□□ -0.01
UBA1-205ENST00000427561 H7C4K7 107 aa15□□□□□ -0.01
UBA1-205ENST00000427561 PRRG1O14668 218 aa15□□□□□ -0.01
UBA1-205ENST00000427561 NCAM2O15394 837 aa15□□□□□ -0.01
UBA1-205ENST00000427561 LAMTOR5O43504 91 aa15□□□□□ -0.01
UBA1-205ENST00000427561 KINO60870 393 aaKnown RBP15□□□□□ -0.01
UBA1-205ENST00000427561 ECI2O75521 394 aa15□□□□□ -0.01
UBA1-205ENST00000427561 ABLIM3O94929 683 aa15□□□□□ -0.01
UBA1-205ENST00000427561 MAGEA9P43362 315 aa15□□□□□ -0.01
UBA1-205ENST00000427561 NPTX2P47972 431 aa15□□□□□ -0.01
UBA1-205ENST00000427561 OSTNP61366 133 aa15□□□□□ -0.01
UBA1-205ENST00000427561 ROR1Q01973 937 aa15□□□□□ -0.01
UBA1-205ENST00000427561 SOX4Q06945 474 aaPredicted RBP15□□□□□ -0.01
UBA1-205ENST00000427561 DMP1Q13316 513 aaPredicted RBP15□□□□□ -0.01
UBA1-205ENST00000427561 ZNF528Q3MIS6 628 aa15□□□□□ -0.01
UBA1-205ENST00000427561 VARS2Q5ST30 1063 aaKnown RBP15□□□□□ -0.01
UBA1-205ENST00000427561 SLC8B1Q6J4K2 584 aa15□□□□□ -0.01
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms