RNA–Protein interactions for RNA: ENST00000427526.6

LIG1-202, Transcript of DNA ligase 1, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene LIG1, Length 3,027 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG1-202ENST00000427526 CCT6BQ92526 530 aa15.29■□□□□ 0.04
LIG1-202ENST00000427526 CCDC127Q96BQ5 260 aa15.29■□□□□ 0.04
LIG1-202ENST00000427526 SAAL1Q96ER3 474 aa15.29■□□□□ 0.04
LIG1-202ENST00000427526 FBXL18Q96ME1 805 aa15.29■□□□□ 0.04
LIG1-202ENST00000427526 PTPN22Q9Y2R2 807 aa15.29■□□□□ 0.04
LIG1-202ENST00000427526 AFG3L2Q9Y4W6 797 aa15.29■□□□□ 0.04
LIG1-202ENST00000427526 FSCN2O14926 492 aa15.28■□□□□ 0.04
LIG1-202ENST00000427526 PEX10O60683 326 aa15.28■□□□□ 0.04
LIG1-202ENST00000427526 FDX1P10109 184 aa15.28■□□□□ 0.04
LIG1-202ENST00000427526 FGFR4P22455 802 aa15.28■□□□□ 0.04
LIG1-202ENST00000427526 PSMC5P62195 406 aa15.28■□□□□ 0.04
LIG1-202ENST00000427526 SUPT20HL1Q3ZLR7 823 aa15.28■□□□□ 0.04
LIG1-202ENST00000427526 ACAD10Q6JQN1 1059 aa15.28■□□□□ 0.04
LIG1-202ENST00000427526 CATSPERGQ6ZRH7 1159 aa15.28■□□□□ 0.04
LIG1-202ENST00000427526 MFSD14AQ96MC6 490 aa15.28■□□□□ 0.04
LIG1-202ENST00000427526 ADAMTS5Q9UNA0 930 aa15.28■□□□□ 0.04
LIG1-202ENST00000427526 ZNFX1Q9P2E3 1918 aaKnown RBP15.28■□□□□ 0.04
LIG1-202ENST00000427526 DOCK1Q14185 1865 aa15.28■□□□□ 0.04
LIG1-202ENST00000427526 TULP1O00294 542 aaPredicted RBP15.28■□□□□ 0.04
LIG1-202ENST00000427526 CCNE2O96020 404 aa15.28■□□□□ 0.04
LIG1-202ENST00000427526 NPTX2P47972 431 aa15.28■□□□□ 0.04
LIG1-202ENST00000427526 FAM102BQ5T8I3 360 aa15.28■□□□□ 0.04
LIG1-202ENST00000427526 GPATCH11Q8N954 259 aa15.28■□□□□ 0.04
LIG1-202ENST00000427526 DDX55Q8NHQ9 600 aaKnown RBP eCLIP15.28■□□□□ 0.04
LIG1-202ENST00000427526 TMC2Q8TDI7 906 aa15.28■□□□□ 0.04
LIG1-202ENST00000427526 TAS1R2Q8TE23 839 aa15.28■□□□□ 0.04
LIG1-202ENST00000427526 EPS8L3Q8TE67 593 aaKnown RBP15.28■□□□□ 0.04
LIG1-202ENST00000427526 CCDC134Q9H6E4 229 aa15.28■□□□□ 0.04
LIG1-202ENST00000427526 ANKEF1Q9NU02 776 aa15.28■□□□□ 0.04
LIG1-202ENST00000427526 RAB20Q9NX57 234 aa15.28■□□□□ 0.04
LIG1-202ENST00000427526 EXOC7Q9UPT5 735 aa15.28■□□□□ 0.04
LIG1-202ENST00000427526 PASKQ96RG2 1323 aa15.28■□□□□ 0.04
LIG1-202ENST00000427526 GOLGA6L7A0A1B0GV03 622 aa15.27■□□□□ 0.04
LIG1-202ENST00000427526 PDE6CP51160 858 aa15.27■□□□□ 0.04
LIG1-202ENST00000427526 AUHQ13825 339 aaKnown RBP15.27■□□□□ 0.04
LIG1-202ENST00000427526 PLA2G4FQ68DD2 849 aa15.27■□□□□ 0.04
LIG1-202ENST00000427526 SLC39A4Q6P5W5 647 aa15.27■□□□□ 0.04
LIG1-202ENST00000427526 FBXL13Q8NEE6 735 aa15.27■□□□□ 0.04
LIG1-202ENST00000427526 P3H4Q92791 437 aa15.27■□□□□ 0.04
LIG1-202ENST00000427526 NTPCRQ9BSD7 190 aaKnown RBP15.27■□□□□ 0.04
LIG1-202ENST00000427526 ASAP2O43150 1006 aa15.27■□□□□ 0.04
LIG1-202ENST00000427526 XKR9Q5GH70 373 aa15.27■□□□□ 0.04
LIG1-202ENST00000427526 MFSD5Q6N075 450 aa15.27■□□□□ 0.04
LIG1-202ENST00000427526 PIGWQ7Z7B1 504 aa15.27■□□□□ 0.04
LIG1-202ENST00000427526 HVCN1Q96D96 273 aa15.27■□□□□ 0.04
LIG1-202ENST00000427526 NT5C1BQ96P26 610 aa15.27■□□□□ 0.04
LIG1-202ENST00000427526 KIFC3Q9BVG8 833 aa15.27■□□□□ 0.04
LIG1-202ENST00000427526 KDM4CQ9H3R0 1056 aa15.27■□□□□ 0.04
LIG1-202ENST00000427526 TOPORSQ9NS56 1045 aaPredicted RBP15.27■□□□□ 0.04
LIG1-202ENST00000427526 SMIM23A6NLE4 172 aa15.27■□□□□ 0.03
LIG1-202ENST00000427526 ADM5C9JUS6 153 aa15.27■□□□□ 0.03
LIG1-202ENST00000427526 ECEL1O95672 775 aa15.27■□□□□ 0.03
LIG1-202ENST00000427526 NR3C2P08235 984 aa15.27■□□□□ 0.03
LIG1-202ENST00000427526 GTF2H1P32780 548 aa15.27■□□□□ 0.03
LIG1-202ENST00000427526 ANO5Q75V66 913 aa15.27■□□□□ 0.03
LIG1-202ENST00000427526 SAMD3Q8N6K7 520 aa15.27■□□□□ 0.03
LIG1-202ENST00000427526 UHMK1Q8TAS1 419 aaKnown RBP15.27■□□□□ 0.03
LIG1-202ENST00000427526 DHX38Q92620 1227 aaKnown RBP15.27■□□□□ 0.03
LIG1-202ENST00000427526 SELENOSQ9BQE4 189 aa15.27■□□□□ 0.03
LIG1-202ENST00000427526 JPH2Q9BR39 696 aaPredicted RBP15.27■□□□□ 0.03
LIG1-202ENST00000427526 SPON1Q9HCB6 807 aa15.27■□□□□ 0.03
LIG1-202ENST00000427526 SLC40A1Q9NP59 571 aa15.27■□□□□ 0.03
LIG1-202ENST00000427526 AAASQ9NRG9 546 aa15.27■□□□□ 0.03
LIG1-202ENST00000427526 KLC4Q9NSK0 619 aa15.27■□□□□ 0.03
LIG1-202ENST00000427526 PPP2R3BQ9Y5P8 575 aa15.27■□□□□ 0.03
LIG1-202ENST00000427526 RASGRF2O14827 1237 aa15.26■□□□□ 0.03
LIG1-202ENST00000427526 CLDN3O15551 220 aa15.26■□□□□ 0.03
LIG1-202ENST00000427526 MNAT1P51948 309 aa15.26■□□□□ 0.03
LIG1-202ENST00000427526 JAK3P52333 1124 aa15.26■□□□□ 0.03
LIG1-202ENST00000427526 VGLL4Q14135 290 aa15.26■□□□□ 0.03
LIG1-202ENST00000427526 CLEC16AQ2KHT3 1053 aa15.26■□□□□ 0.03
LIG1-202ENST00000427526 SV2AQ7L0J3 742 aa15.26■□□□□ 0.03
LIG1-202ENST00000427526 VSIG10LQ86VR7 867 aa15.26■□□□□ 0.03
LIG1-202ENST00000427526 DENND3A2RUS2 1198 aa15.26■□□□□ 0.03
LIG1-202ENST00000427526 WDR64B1ANS9 1081 aa15.26■□□□□ 0.03
LIG1-202ENST00000427526 UNGP13051 313 aaPredicted RBP15.26■□□□□ 0.03
LIG1-202ENST00000427526 SCTRP47872 440 aa15.26■□□□□ 0.03
LIG1-202ENST00000427526 NOL9Q5SY16 702 aaKnown RBP15.26■□□□□ 0.03
LIG1-202ENST00000427526 RHBDF2Q6PJF5 856 aa15.26■□□□□ 0.03
LIG1-202ENST00000427526 TRMT10CQ7L0Y3 403 aaKnown RBP15.26■□□□□ 0.03
LIG1-202ENST00000427526 BSNDQ8WZ55 320 aa15.26■□□□□ 0.03
LIG1-202ENST00000427526 KIFAP3Q92845 792 aa15.26■□□□□ 0.03
LIG1-202ENST00000427526 ELMO3Q96BJ8 720 aa15.26■□□□□ 0.03
LIG1-202ENST00000427526 CCDC114Q96M63 670 aa15.26■□□□□ 0.03
LIG1-202ENST00000427526 ROPN1BQ9BZX4 212 aaPredicted RBP15.26■□□□□ 0.03
LIG1-202ENST00000427526 ROPN1Q9HAT0 212 aaPredicted RBP15.26■□□□□ 0.03
LIG1-202ENST00000427526 RNF181Q9P0P0 153 aa15.26■□□□□ 0.03
LIG1-202ENST00000427526 WHRNQ9P202 907 aa15.26■□□□□ 0.03
LIG1-202ENST00000427526 SNCAIPQ9Y6H5 919 aa15.26■□□□□ 0.03
LIG1-202ENST00000427526 SPDYE16A6NNV3 312 aaPredicted RBP15.25■□□□□ 0.03
LIG1-202ENST00000427526 GHRP10912 638 aa15.25■□□□□ 0.03
LIG1-202ENST00000427526 SFNP31947 248 aa15.25■□□□□ 0.03
LIG1-202ENST00000427526 SLCO1A2P46721 670 aa15.25■□□□□ 0.03
LIG1-202ENST00000427526 CYP24A1Q07973 514 aa15.25■□□□□ 0.03
LIG1-202ENST00000427526 INTS9Q9NV88 658 aaKnown RBP15.25■□□□□ 0.03
LIG1-202ENST00000427526 TELO2Q9Y4R8 837 aa15.25■□□□□ 0.03
LIG1-202ENST00000427526 DLATP10515 647 aaKnown RBP15.25■□□□□ 0.03
LIG1-202ENST00000427526 IVDP26440 423 aa15.25■□□□□ 0.03
LIG1-202ENST00000427526 DMP1Q13316 513 aaPredicted RBP15.25■□□□□ 0.03
LIG1-202ENST00000427526 C1orf54Q8WWF1 131 aa15.25■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 22.8 ms